RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 AKAIN1P0CW23 69 aa18.68■□□□□ 0.58
C9orf3-207ENST00000445181 NQO2P16083 231 aa18.68■□□□□ 0.58
C9orf3-207ENST00000445181 F2RP25116 425 aa18.68■□□□□ 0.58
C9orf3-207ENST00000445181 CDX1P47902 265 aaPredicted RBP18.68■□□□□ 0.58
C9orf3-207ENST00000445181 RAB9AP51151 201 aa18.68■□□□□ 0.58
C9orf3-207ENST00000445181 PPP5CP53041 499 aa18.68■□□□□ 0.58
C9orf3-207ENST00000445181 KPRPQ5T749 579 aaPredicted RBP18.68■□□□□ 0.58
C9orf3-207ENST00000445181 CASTOR1Q8WTX7 329 aa18.68■□□□□ 0.58
C9orf3-207ENST00000445181 PLEKHA2Q9HB19 425 aa18.68■□□□□ 0.58
C9orf3-207ENST00000445181 HRASLSQ9HDD0 168 aa18.68■□□□□ 0.58
C9orf3-207ENST00000445181 ZNF355PQ9NSJ1 428 aa18.68■□□□□ 0.58
C9orf3-207ENST00000445181 MSGN1A6NI15 193 aa18.67■□□□□ 0.58
C9orf3-207ENST00000445181 DISC1C4P0D8 188 aa18.67■□□□□ 0.58
C9orf3-207ENST00000445181 MPPED1O15442 326 aa18.67■□□□□ 0.58
C9orf3-207ENST00000445181 S1PR2O95136 353 aa18.67■□□□□ 0.58
C9orf3-207ENST00000445181 APELAP0DMC3 54 aa18.67■□□□□ 0.58
C9orf3-207ENST00000445181 CD33P20138 364 aa18.67■□□□□ 0.58
C9orf3-207ENST00000445181 OXLD1Q5BKU9 147 aa18.67■□□□□ 0.58
C9orf3-207ENST00000445181 FAAP20Q6NZ36 180 aa18.67■□□□□ 0.58
C9orf3-207ENST00000445181 TBC1D26Q86UD7 250 aa18.67■□□□□ 0.58
C9orf3-207ENST00000445181 LHFPL1Q86WI0 220 aa18.67■□□□□ 0.58
C9orf3-207ENST00000445181 PUSL1Q8N0Z8 303 aaKnown RBP18.67■□□□□ 0.58
C9orf3-207ENST00000445181 DMBX1Q8NFW5 382 aa18.67■□□□□ 0.58
C9orf3-207ENST00000445181 OR5T1Q8NG75 326 aa18.67■□□□□ 0.58
C9orf3-207ENST00000445181 TERB2Q8NHR7 220 aa18.67■□□□□ 0.58
C9orf3-207ENST00000445181 TMEM167AQ8TBQ9 72 aa18.67■□□□□ 0.58
C9orf3-207ENST00000445181 SRSF12Q8WXF0 261 aaKnown RBP18.67■□□□□ 0.58
C9orf3-207ENST00000445181 TMEM68Q96MH6 324 aa18.67■□□□□ 0.58
C9orf3-207ENST00000445181 MS4A10Q96PG2 267 aa18.67■□□□□ 0.58
C9orf3-207ENST00000445181 TNCP24821 2201 aa18.67■□□□□ 0.58
C9orf3-207ENST00000445181 LPAR6P43657 344 aa18.66■□□□□ 0.58
C9orf3-207ENST00000445181 ERVK-16P61578 105 aa18.66■□□□□ 0.58
C9orf3-207ENST00000445181 OR4A47Q6IF82 309 aa18.66■□□□□ 0.58
C9orf3-207ENST00000445181 UBE2E2Q96LR5 201 aa18.66■□□□□ 0.58
C9orf3-207ENST00000445181 THAP7Q9BT49 309 aaPredicted RBP18.66■□□□□ 0.58
C9orf3-207ENST00000445181 SLC2A9Q9NRM0 540 aa18.66■□□□□ 0.58
C9orf3-207ENST00000445181 COMMD9Q9P000 198 aa18.66■□□□□ 0.58
C9orf3-207ENST00000445181 VSIG4Q9Y279 399 aa18.66■□□□□ 0.58
C9orf3-207ENST00000445181 PI3P19957 117 aa18.65■□□□□ 0.58
C9orf3-207ENST00000445181 SPANXN2Q5MJ10 180 aa18.65■□□□□ 0.58
C9orf3-207ENST00000445181 ZNF491Q8N8L2 437 aa18.65■□□□□ 0.58
C9orf3-207ENST00000445181 OR4C16Q8NGL9 310 aa18.65■□□□□ 0.58
C9orf3-207ENST00000445181 OR4A5Q8NH83 315 aa18.65■□□□□ 0.58
C9orf3-207ENST00000445181 ZFAND1Q8TCF1 268 aa18.65■□□□□ 0.58
C9orf3-207ENST00000445181 MYOZ3Q8TDC0 251 aa18.65■□□□□ 0.58
C9orf3-207ENST00000445181 C4orf3Q8WVX3 66 aa18.65■□□□□ 0.58
C9orf3-207ENST00000445181 ZNF486Q96H40 463 aaPredicted RBP18.65■□□□□ 0.58
C9orf3-207ENST00000445181 SPIN2AQ99865 258 aa18.65■□□□□ 0.58
C9orf3-207ENST00000445181 SPIN2BQ9BPZ2 258 aa18.65■□□□□ 0.58
C9orf3-207ENST00000445181 BET1LQ9NYM9 111 aa18.65■□□□□ 0.58
C9orf3-207ENST00000445181 V9GYH0 126 aa18.65■□□□□ 0.58
C9orf3-207ENST00000445181 ANKRD20A5PA0PJZ0 165 aa18.64■□□□□ 0.57
C9orf3-207ENST00000445181 RPA2P15927 270 aa18.64■□□□□ 0.57
C9orf3-207ENST00000445181 MAS1LP35410 378 aa18.64■□□□□ 0.57
C9orf3-207ENST00000445181 MYCNOSP40205 109 aa18.64■□□□□ 0.57
C9orf3-207ENST00000445181 TPPP2P59282 170 aa18.64■□□□□ 0.57
C9orf3-207ENST00000445181 RPL8P62917 257 aaKnown RBP18.64■□□□□ 0.57
C9orf3-207ENST00000445181 DEFB136Q30KP8 78 aa18.64■□□□□ 0.57
C9orf3-207ENST00000445181 C10orf55Q5SWW7 151 aa18.64■□□□□ 0.57
C9orf3-207ENST00000445181 CCDC190Q86UF4 302 aa18.64■□□□□ 0.57
C9orf3-207ENST00000445181 Q8N402 240 aa18.64■□□□□ 0.57
C9orf3-207ENST00000445181 DUX3Q96PT4 197 aa18.64■□□□□ 0.57
C9orf3-207ENST00000445181 OR5B12Q96R08 314 aa18.64■□□□□ 0.57
C9orf3-207ENST00000445181 SLA2Q9H6Q3 261 aa18.64■□□□□ 0.57
C9orf3-207ENST00000445181 COA4Q9NYJ1 87 aa18.64■□□□□ 0.57
C9orf3-207ENST00000445181 CCL24O00175 119 aa18.63■□□□□ 0.57
C9orf3-207ENST00000445181 PRB2P02812 416 aaPredicted RBP18.63■□□□□ 0.57
C9orf3-207ENST00000445181 TRGV3P03979 118 aa18.63■□□□□ 0.57
C9orf3-207ENST00000445181 ZNF735P0CB33 412 aa18.63■□□□□ 0.57
C9orf3-207ENST00000445181 PIGPP57054 158 aa18.63■□□□□ 0.57
C9orf3-207ENST00000445181 ASPHD1Q5U4P2 390 aa18.63■□□□□ 0.57
C9orf3-207ENST00000445181 FOXB2Q5VYV0 432 aa18.63■□□□□ 0.57
C9orf3-207ENST00000445181 ETV3LQ6ZN32 361 aa18.63■□□□□ 0.57
C9orf3-207ENST00000445181 MARCH1Q8TCQ1 289 aa18.63■□□□□ 0.57
C9orf3-207ENST00000445181 RAX2Q96IS3 184 aa18.63■□□□□ 0.57
C9orf3-207ENST00000445181 GNB4Q9HAV0 340 aa18.63■□□□□ 0.57
C9orf3-207ENST00000445181 TMEM140Q9NV12 185 aa18.63■□□□□ 0.57
C9orf3-207ENST00000445181 NOTCH3Q9UM47 2321 aa18.63■□□□□ 0.57
C9orf3-207ENST00000445181 MARCH11A6NNE9 402 aa18.62■□□□□ 0.57
C9orf3-207ENST00000445181 PTBP1P26599 531 aaKnown RBP eCLIP18.62■□□□□ 0.571e-7■■■□□ 14.7
C9orf3-207ENST00000445181 ECI1P42126 302 aa18.62■□□□□ 0.57
C9orf3-207ENST00000445181 RPL27AP46776 148 aaKnown RBP18.62■□□□□ 0.57
C9orf3-207ENST00000445181 RAB25P57735 213 aa18.62■□□□□ 0.57
C9orf3-207ENST00000445181 KIAA0141Q14154 515 aaPredicted RBP18.62■□□□□ 0.57
C9orf3-207ENST00000445181 POU2AF1Q16633 256 aa18.62■□□□□ 0.57
C9orf3-207ENST00000445181 MRPL41Q8IXM3 137 aaKnown RBP18.62■□□□□ 0.57
C9orf3-207ENST00000445181 WFDC9Q8NEX5 89 aa18.62■□□□□ 0.57
C9orf3-207ENST00000445181 OR6Q1Q8NGQ2 317 aa18.62■□□□□ 0.57
C9orf3-207ENST00000445181 OR13C8Q8NGS7 320 aa18.62■□□□□ 0.57
C9orf3-207ENST00000445181 FYTTD1Q96QD9 318 aaKnown RBP18.62■□□□□ 0.57
C9orf3-207ENST00000445181 PRRT1Q99946 306 aa18.62■□□□□ 0.57
C9orf3-207ENST00000445181 MCUBQ9NWR8 336 aa18.62■□□□□ 0.57
C9orf3-207ENST00000445181 COPZ2Q9P299 210 aa18.62■□□□□ 0.57
C9orf3-207ENST00000445181 H3BUA1 57 aa18.61■□□□□ 0.57
C9orf3-207ENST00000445181 KRASP01116 189 aa18.61■□□□□ 0.57
C9orf3-207ENST00000445181 HLA-GP17693 338 aa18.61■□□□□ 0.57
C9orf3-207ENST00000445181 RND3P61587 244 aa18.61■□□□□ 0.57
C9orf3-207ENST00000445181 ZNF585BQ52M93 769 aa18.61■□□□□ 0.57
C9orf3-207ENST00000445181 CCDC71LQ8N9Z2 235 aa18.61■□□□□ 0.57
C9orf3-207ENST00000445181 C14orf166Q9Y224 244 aaKnown RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms