RNA–Protein interactions for RNA: ENST00000444719.5

LMBR1-211, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-211ENST00000444719 CMTM3Q96MX0 182 aa17.15■□□□□ 0.34
LMBR1-211ENST00000444719 FYTTD1Q96QD9 318 aaKnown RBP17.15■□□□□ 0.34
LMBR1-211ENST00000444719 SPIN2AQ99865 258 aa17.15■□□□□ 0.34
LMBR1-211ENST00000444719 SPIN2BQ9BPZ2 258 aa17.15■□□□□ 0.34
LMBR1-211ENST00000444719 RANGRFQ9HD47 186 aaPredicted RBP17.15■□□□□ 0.34
LMBR1-211ENST00000444719 E7EUB6 86 aa17.14■□□□□ 0.33
LMBR1-211ENST00000444719 INSL3P51460 131 aa17.14■□□□□ 0.33
LMBR1-211ENST00000444719 CATR1Q13166 79 aa17.14■□□□□ 0.33
LMBR1-211ENST00000444719 AADACL3Q5VUY0 350 aa17.14■□□□□ 0.33
LMBR1-211ENST00000444719 GPR141Q7Z602 305 aa17.14■□□□□ 0.33
LMBR1-211ENST00000444719 ZNF429Q86V71 674 aa17.14■□□□□ 0.33
LMBR1-211ENST00000444719 MOB3AQ96BX8 217 aa17.14■□□□□ 0.33
LMBR1-211ENST00000444719 SORL1Q92673 2214 aa17.13■□□□□ 0.33
LMBR1-211ENST00000444719 BRI3O95415 125 aa17.13■□□□□ 0.33
LMBR1-211ENST00000444719 MYOD1P15172 320 aa17.13■□□□□ 0.33
LMBR1-211ENST00000444719 RPL27AP46776 148 aaKnown RBP17.13■□□□□ 0.33
LMBR1-211ENST00000444719 ALDH3B2P48448 385 aa17.13■□□□□ 0.33
LMBR1-211ENST00000444719 RNASE12Q5GAN4 147 aaKnown RBP17.13■□□□□ 0.33
LMBR1-211ENST00000444719 ACSM6Q6P461 480 aa17.13■□□□□ 0.33
LMBR1-211ENST00000444719 OR6F1Q8NGZ6 308 aa17.13■□□□□ 0.33
LMBR1-211ENST00000444719 USMG5Q96IX5 58 aa17.13■□□□□ 0.33
LMBR1-211ENST00000444719 HRASLSQ9HDD0 168 aa17.13■□□□□ 0.33
LMBR1-211ENST00000444719 TEX22C9J3V5 150 aa17.12■□□□□ 0.33
LMBR1-211ENST00000444719 TRBV12-3P01733 135 aa17.12■□□□□ 0.33
LMBR1-211ENST00000444719 IL6RP08887 468 aaPredicted RBP17.12■□□□□ 0.33
LMBR1-211ENST00000444719 ZNF182P17025 639 aaPredicted RBP17.12■□□□□ 0.33
LMBR1-211ENST00000444719 RHOGP84095 191 aa17.12■□□□□ 0.33
LMBR1-211ENST00000444719 ZNF45Q02386 682 aa17.12■□□□□ 0.33
LMBR1-211ENST00000444719 OR4A47Q6IF82 309 aa17.12■□□□□ 0.33
LMBR1-211ENST00000444719 ZNF343Q6P1L6 599 aa17.12■□□□□ 0.33
LMBR1-211ENST00000444719 C19orf35Q6ZS72 473 aa17.12■□□□□ 0.33
LMBR1-211ENST00000444719 TTC9CQ8N5M4 171 aa17.12■□□□□ 0.33
LMBR1-211ENST00000444719 AP3S1Q92572 193 aa17.12■□□□□ 0.33
LMBR1-211ENST00000444719 AKIP1Q9NQ31 210 aa17.12■□□□□ 0.33
LMBR1-211ENST00000444719 ZNF256Q9Y2P7 627 aaPredicted RBP17.12■□□□□ 0.33
LMBR1-211ENST00000444719 A0A1B0GW64 132 aa17.11■□□□□ 0.33
LMBR1-211ENST00000444719 RBFOX2O43251 390 aaKnown RBP eCLIP17.11■□□□□ 0.333e-6■■□□□ 14.2
LMBR1-211ENST00000444719 HPRT1P00492 218 aa17.11■□□□□ 0.33
LMBR1-211ENST00000444719 RLN1P04808 185 aa17.11■□□□□ 0.33
LMBR1-211ENST00000444719 RPA2P15927 270 aa17.11■□□□□ 0.33
LMBR1-211ENST00000444719 ZP3P21754 424 aa17.11■□□□□ 0.33
LMBR1-211ENST00000444719 TSPAN5P62079 268 aa17.11■□□□□ 0.33
LMBR1-211ENST00000444719 CD69Q07108 199 aa17.11■□□□□ 0.33
LMBR1-211ENST00000444719 AIFM2Q9BRQ8 373 aa17.11■□□□□ 0.33
LMBR1-211ENST00000444719 FXYD6Q9H0Q3 95 aa17.11■□□□□ 0.33
LMBR1-211ENST00000444719 SCPEP1Q9HB40 452 aa17.11■□□□□ 0.33
LMBR1-211ENST00000444719 PEF1Q9UBV8 284 aaKnown RBP17.11■□□□□ 0.33
LMBR1-211ENST00000444719 ADAM30Q9UKF2 790 aa17.11■□□□□ 0.33
LMBR1-211ENST00000444719 COL7A1Q02388 2944 aa17.1■□□□□ 0.33
LMBR1-211ENST00000444719 DPPA5A6NC42 116 aa17.1■□□□□ 0.33
LMBR1-211ENST00000444719 PGLYRP1O75594 196 aaPredicted RBP17.1■□□□□ 0.33
LMBR1-211ENST00000444719 S1PR2O95136 353 aa17.1■□□□□ 0.33
LMBR1-211ENST00000444719 MAS1LP35410 378 aa17.1■□□□□ 0.33
LMBR1-211ENST00000444719 TAS2R31P59538 309 aa17.1■□□□□ 0.33
LMBR1-211ENST00000444719 RPL8P62917 257 aaKnown RBP17.1■□□□□ 0.33
LMBR1-211ENST00000444719 HAPLN4Q86UW8 402 aa17.1■□□□□ 0.33
LMBR1-211ENST00000444719 BORCS5Q969J3 196 aa17.1■□□□□ 0.33
LMBR1-211ENST00000444719 OR4C12Q96R67 309 aa17.1■□□□□ 0.33
LMBR1-211ENST00000444719 TRBV9A0A0B4J1U6 114 aa17.09■□□□□ 0.33
LMBR1-211ENST00000444719 TRAV3A0A0B4J244 114 aa17.09■□□□□ 0.33
LMBR1-211ENST00000444719 OR2J3O76001 311 aa17.09■□□□□ 0.33
LMBR1-211ENST00000444719 AREGP15514 252 aa17.09■□□□□ 0.33
LMBR1-211ENST00000444719 NQO2P16083 231 aa17.09■□□□□ 0.33
LMBR1-211ENST00000444719 HLA-GP17693 338 aa17.09■□□□□ 0.33
LMBR1-211ENST00000444719 RCVRNP35243 200 aa17.09■□□□□ 0.33
LMBR1-211ENST00000444719 ATP5G2Q06055 141 aa17.09■□□□□ 0.33
LMBR1-211ENST00000444719 SLC25A42Q86VD7 318 aa17.09■□□□□ 0.33
LMBR1-211ENST00000444719 DMBX1Q8NFW5 382 aa17.09■□□□□ 0.33
LMBR1-211ENST00000444719 B9D2Q9BPU9 175 aa17.09■□□□□ 0.33
LMBR1-211ENST00000444719 RSRP1Q9BUV0 290 aa17.09■□□□□ 0.33
LMBR1-211ENST00000444719 ELOVL1Q9BW60 279 aa17.09■□□□□ 0.33
LMBR1-211ENST00000444719 SLC2A9Q9NRM0 540 aa17.09■□□□□ 0.33
LMBR1-211ENST00000444719 BET1LQ9NYM9 111 aa17.09■□□□□ 0.33
LMBR1-211ENST00000444719 EXTL2Q9UBQ6 330 aa17.09■□□□□ 0.33
LMBR1-211ENST00000444719 LSM4Q9Y4Z0 139 aaKnown RBP17.09■□□□□ 0.33
LMBR1-211ENST00000444719 REG1AP05451 166 aa17.08■□□□□ 0.32
LMBR1-211ENST00000444719 ZNF735P0CB33 412 aa17.08■□□□□ 0.32
LMBR1-211ENST00000444719 SPNP16150 400 aa17.08■□□□□ 0.32
LMBR1-211ENST00000444719 SYNJ2BPP57105 145 aa17.08■□□□□ 0.32
LMBR1-211ENST00000444719 DCTN2Q13561 401 aaKnown RBP17.08■□□□□ 0.32
LMBR1-211ENST00000444719 EXOSC2Q13868 293 aaKnown RBP17.08■□□□□ 0.32
LMBR1-211ENST00000444719 KLF5Q13887 457 aaPredicted RBP17.08■□□□□ 0.32
LMBR1-211ENST00000444719 SPCS2Q15005 226 aa17.08■□□□□ 0.32
LMBR1-211ENST00000444719 PHLDA2Q53GA4 152 aa17.08■□□□□ 0.32
LMBR1-211ENST00000444719 CLVS1Q8IUQ0 354 aaPredicted RBP17.08■□□□□ 0.32
LMBR1-211ENST00000444719 OR4A5Q8NH83 315 aa17.08■□□□□ 0.32
LMBR1-211ENST00000444719 CD300LFQ8TDQ1 290 aa17.08■□□□□ 0.32
LMBR1-211ENST00000444719 PLEKHA2Q9HB19 425 aa17.08■□□□□ 0.32
LMBR1-211ENST00000444719 ZNF257Q9Y2Q1 563 aa17.08■□□□□ 0.32
LMBR1-211ENST00000444719 FAM223BA6NKX1 122 aa17.07■□□□□ 0.32
LMBR1-211ENST00000444719 M0QYG6 137 aa17.07■□□□□ 0.32
LMBR1-211ENST00000444719 GPR31O00270 319 aa17.07■□□□□ 0.32
LMBR1-211ENST00000444719 UPK2O00526 184 aa17.07■□□□□ 0.32
LMBR1-211ENST00000444719 C11orf87Q6NUJ2 197 aa17.07■□□□□ 0.32
LMBR1-211ENST00000444719 FAM223AQ8IWN6 122 aa17.07■□□□□ 0.32
LMBR1-211ENST00000444719 CMTM1Q8IZ96 169 aa17.07■□□□□ 0.32
LMBR1-211ENST00000444719 NECAP1Q8NC96 275 aa17.07■□□□□ 0.32
LMBR1-211ENST00000444719 TMEM140Q9NV12 185 aa17.07■□□□□ 0.32
LMBR1-211ENST00000444719 KLK11Q9UBX7 282 aa17.07■□□□□ 0.32
LMBR1-211ENST00000444719 CGB1A6NKQ9 187 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms