RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 TERB2Q8NHR7 220 aa13.63□□□□□ -0.23
SMARCAL1-209ENST00000444508 TMEM167AQ8TBQ9 72 aa13.63□□□□□ -0.23
SMARCAL1-209ENST00000444508 SRSF12Q8WXF0 261 aaKnown RBP13.63□□□□□ -0.23
SMARCAL1-209ENST00000444508 ZNF486Q96H40 463 aaPredicted RBP13.63□□□□□ -0.23
SMARCAL1-209ENST00000444508 COMMD9Q9P000 198 aa13.63□□□□□ -0.23
SMARCAL1-209ENST00000444508 TNCP24821 2201 aa13.62□□□□□ -0.23
SMARCAL1-209ENST00000444508 MPPED1O15442 326 aa13.62□□□□□ -0.23
SMARCAL1-209ENST00000444508 SOX15O60248 233 aa13.62□□□□□ -0.23
SMARCAL1-209ENST00000444508 S1PR2O95136 353 aa13.62□□□□□ -0.23
SMARCAL1-209ENST00000444508 PTBP1P26599 531 aaKnown RBP eCLIP13.62□□□□□ -0.23
SMARCAL1-209ENST00000444508 MAS1LP35410 378 aa13.62□□□□□ -0.23
SMARCAL1-209ENST00000444508 ERVK-16P61578 105 aa13.62□□□□□ -0.23
SMARCAL1-209ENST00000444508 OR4A47Q6IF82 309 aa13.62□□□□□ -0.23
SMARCAL1-209ENST00000444508 TBC1D26Q86UD7 250 aa13.62□□□□□ -0.23
SMARCAL1-209ENST00000444508 CCDC190Q86UF4 302 aa13.62□□□□□ -0.23
SMARCAL1-209ENST00000444508 DMBX1Q8NFW5 382 aa13.62□□□□□ -0.23
SMARCAL1-209ENST00000444508 OR4A5Q8NH83 315 aa13.62□□□□□ -0.23
SMARCAL1-209ENST00000444508 ZFAND1Q8TCF1 268 aa13.62□□□□□ -0.23
SMARCAL1-209ENST00000444508 THAP7Q9BT49 309 aaPredicted RBP13.62□□□□□ -0.23
SMARCAL1-209ENST00000444508 KLK15Q9H2R5 256 aa13.62□□□□□ -0.23
SMARCAL1-209ENST00000444508 HRASLSQ9HDD0 168 aa13.62□□□□□ -0.23
SMARCAL1-209ENST00000444508 SLC2A9Q9NRM0 540 aa13.62□□□□□ -0.23
SMARCAL1-209ENST00000444508 ZNF355PQ9NSJ1 428 aa13.62□□□□□ -0.23
SMARCAL1-209ENST00000444508 BET1LQ9NYM9 111 aa13.62□□□□□ -0.23
SMARCAL1-209ENST00000444508 V9GYH0 126 aa13.62□□□□□ -0.23
SMARCAL1-209ENST00000444508 NOTCH1P46531 2555 aa13.61□□□□□ -0.23
SMARCAL1-209ENST00000444508 ANKRD20A5PA0PJZ0 165 aa13.61□□□□□ -0.23
SMARCAL1-209ENST00000444508 MSGN1A6NI15 193 aa13.61□□□□□ -0.23
SMARCAL1-209ENST00000444508 ECI1P42126 302 aa13.61□□□□□ -0.23
SMARCAL1-209ENST00000444508 LPAR6P43657 344 aa13.61□□□□□ -0.23
SMARCAL1-209ENST00000444508 FOXB2Q5VYV0 432 aa13.61□□□□□ -0.23
SMARCAL1-209ENST00000444508 FAAP20Q6NZ36 180 aa13.61□□□□□ -0.23
SMARCAL1-209ENST00000444508 Q8N402 240 aa13.61□□□□□ -0.23
SMARCAL1-209ENST00000444508 OR5T1Q8NG75 326 aa13.61□□□□□ -0.23
SMARCAL1-209ENST00000444508 OR4C16Q8NGL9 310 aa13.61□□□□□ -0.23
SMARCAL1-209ENST00000444508 MYOZ3Q8TDC0 251 aa13.61□□□□□ -0.23
SMARCAL1-209ENST00000444508 C4orf3Q8WVX3 66 aa13.61□□□□□ -0.23
SMARCAL1-209ENST00000444508 UBE2E2Q96LR5 201 aa13.61□□□□□ -0.23
SMARCAL1-209ENST00000444508 SPIN2AQ99865 258 aa13.61□□□□□ -0.23
SMARCAL1-209ENST00000444508 SPIN2BQ9BPZ2 258 aa13.61□□□□□ -0.23
SMARCAL1-209ENST00000444508 SLA2Q9H6Q3 261 aa13.61□□□□□ -0.23
SMARCAL1-209ENST00000444508 VSIG4Q9Y279 399 aa13.61□□□□□ -0.23
SMARCAL1-209ENST00000444508 H3BUA1 57 aa13.6□□□□□ -0.23
SMARCAL1-209ENST00000444508 ZNF735P0CB33 412 aa13.6□□□□□ -0.23
SMARCAL1-209ENST00000444508 PI3P19957 117 aa13.6□□□□□ -0.23
SMARCAL1-209ENST00000444508 CD33P20138 364 aa13.6□□□□□ -0.23
SMARCAL1-209ENST00000444508 MYCNOSP40205 109 aa13.6□□□□□ -0.23
SMARCAL1-209ENST00000444508 RND3P61587 244 aa13.6□□□□□ -0.23
SMARCAL1-209ENST00000444508 RPL8P62917 257 aaKnown RBP13.6□□□□□ -0.23
SMARCAL1-209ENST00000444508 POU2AF1Q16633 256 aa13.6□□□□□ -0.23
SMARCAL1-209ENST00000444508 ZNF491Q8N8L2 437 aa13.6□□□□□ -0.23
SMARCAL1-209ENST00000444508 OR6Q1Q8NGQ2 317 aa13.6□□□□□ -0.23
SMARCAL1-209ENST00000444508 CASTOR1Q8WTX7 329 aa13.6□□□□□ -0.23
SMARCAL1-209ENST00000444508 MS4A10Q96PG2 267 aa13.6□□□□□ -0.23
SMARCAL1-209ENST00000444508 PRRT1Q99946 306 aa13.6□□□□□ -0.23
SMARCAL1-209ENST00000444508 FAM212BQ9NTI7 297 aaPredicted RBP13.6□□□□□ -0.23
SMARCAL1-209ENST00000444508 TMEM140Q9NV12 185 aa13.6□□□□□ -0.23
SMARCAL1-209ENST00000444508 COPZ2Q9P299 210 aa13.6□□□□□ -0.23
SMARCAL1-209ENST00000444508 MARCH11A6NNE9 402 aa13.59□□□□□ -0.23
SMARCAL1-209ENST00000444508 TRGV3P03979 118 aa13.59□□□□□ -0.23
SMARCAL1-209ENST00000444508 APELAP0DMC3 54 aa13.59□□□□□ -0.23
SMARCAL1-209ENST00000444508 HLA-GP17693 338 aa13.59□□□□□ -0.23
SMARCAL1-209ENST00000444508 ETV6P41212 452 aa13.59□□□□□ -0.23
SMARCAL1-209ENST00000444508 RPL27AP46776 148 aaKnown RBP13.59□□□□□ -0.23
SMARCAL1-209ENST00000444508 PIGPP57054 158 aa13.59□□□□□ -0.23
SMARCAL1-209ENST00000444508 TPPP2P59282 170 aa13.59□□□□□ -0.23
SMARCAL1-209ENST00000444508 AP3S2P59780 193 aa13.59□□□□□ -0.23
SMARCAL1-209ENST00000444508 C10orf55Q5SWW7 151 aa13.59□□□□□ -0.23
SMARCAL1-209ENST00000444508 CCDC71LQ8N9Z2 235 aa13.59□□□□□ -0.23
SMARCAL1-209ENST00000444508 OR13C8Q8NGS7 320 aa13.59□□□□□ -0.23
SMARCAL1-209ENST00000444508 MARCH1Q8TCQ1 289 aa13.59□□□□□ -0.23
SMARCAL1-209ENST00000444508 RAX2Q96IS3 184 aa13.59□□□□□ -0.23
SMARCAL1-209ENST00000444508 MCUBQ9NWR8 336 aa13.59□□□□□ -0.23
SMARCAL1-209ENST00000444508 COA4Q9NYJ1 87 aa13.59□□□□□ -0.23
SMARCAL1-209ENST00000444508 SCP2D1Q9UJQ7 156 aa13.59□□□□□ -0.23
SMARCAL1-209ENST00000444508 CCL24O00175 119 aa13.58□□□□□ -0.24
SMARCAL1-209ENST00000444508 UPK2O00526 184 aa13.58□□□□□ -0.24
SMARCAL1-209ENST00000444508 SERPINE2P07093 398 aa13.58□□□□□ -0.24
SMARCAL1-209ENST00000444508 CTSDP07339 412 aaPredicted RBP13.58□□□□□ -0.24
SMARCAL1-209ENST00000444508 RPA2P15927 270 aa13.58□□□□□ -0.24
SMARCAL1-209ENST00000444508 FAUP35544 74 aaKnown RBP13.58□□□□□ -0.24
SMARCAL1-209ENST00000444508 KIAA0141Q14154 515 aaPredicted RBP13.58□□□□□ -0.24
SMARCAL1-209ENST00000444508 SURF2Q15527 256 aaPredicted RBP13.58□□□□□ -0.24
SMARCAL1-209ENST00000444508 ZNF79Q15937 498 aa13.58□□□□□ -0.24
SMARCAL1-209ENST00000444508 DEFB136Q30KP8 78 aa13.58□□□□□ -0.24
SMARCAL1-209ENST00000444508 ZNF585BQ52M93 769 aa13.58□□□□□ -0.24
SMARCAL1-209ENST00000444508 ASPHD1Q5U4P2 390 aa13.58□□□□□ -0.24
SMARCAL1-209ENST00000444508 ETV3LQ6ZN32 361 aa13.58□□□□□ -0.24
SMARCAL1-209ENST00000444508 TOMM5Q8N4H5 51 aa13.58□□□□□ -0.24
SMARCAL1-209ENST00000444508 OR51S1Q8NGJ8 323 aa13.58□□□□□ -0.24
SMARCAL1-209ENST00000444508 FYTTD1Q96QD9 318 aaKnown RBP13.58□□□□□ -0.24
SMARCAL1-209ENST00000444508 OR5B12Q96R08 314 aa13.58□□□□□ -0.24
SMARCAL1-209ENST00000444508 GNB4Q9HAV0 340 aa13.58□□□□□ -0.24
SMARCAL1-209ENST00000444508 C14orf166Q9Y224 244 aaKnown RBP13.58□□□□□ -0.24
SMARCAL1-209ENST00000444508 MEGF8Q7Z7M0 2845 aa13.58□□□□□ -0.24
SMARCAL1-209ENST00000444508 KRASP01116 189 aa13.57□□□□□ -0.24
SMARCAL1-209ENST00000444508 OR9G9P0C7N8 305 aa13.57□□□□□ -0.24
SMARCAL1-209ENST00000444508 MRPL41Q8IXM3 137 aaKnown RBP13.57□□□□□ -0.24
SMARCAL1-209ENST00000444508 LINC00482Q8N8I6 264 aa13.57□□□□□ -0.24
SMARCAL1-209ENST00000444508 WFDC9Q8NEX5 89 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms