RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 EGR1P18146 543 aa11.77□□□□□ -0.53
SMARCA4-204ENST00000444061 COMPP49747 757 aaPredicted RBP11.77□□□□□ -0.53
SMARCA4-204ENST00000444061 CXorf66Q5JRM2 361 aaPredicted RBP11.77□□□□□ -0.53
SMARCA4-204ENST00000444061 SIGLECL1Q8N7X8 197 aa11.77□□□□□ -0.53
SMARCA4-204ENST00000444061 FBXL17Q9UF56 701 aa11.77□□□□□ -0.53
SMARCA4-204ENST00000444061 PAFAH1B2P68402 229 aa11.77□□□□□ -0.53
SMARCA4-204ENST00000444061 TMEM155Q4W5P6 130 aa11.77□□□□□ -0.53
SMARCA4-204ENST00000444061 KDF1Q8NAX2 398 aaPredicted RBP11.77□□□□□ -0.53
SMARCA4-204ENST00000444061 MS4A10Q96PG2 267 aa11.77□□□□□ -0.53
SMARCA4-204ENST00000444061 FBXL15Q9H469 300 aa11.77□□□□□ -0.53
SMARCA4-204ENST00000444061 CEP295Q9C0D2 2601 aa11.77□□□□□ -0.53
SMARCA4-204ENST00000444061 DOCK10Q96BY6 2186 aa11.76□□□□□ -0.53
SMARCA4-204ENST00000444061 YPEL1O60688 119 aa11.76□□□□□ -0.53
SMARCA4-204ENST00000444061 DYNLT3P51808 116 aa11.76□□□□□ -0.53
SMARCA4-204ENST00000444061 TPPP2P59282 170 aa11.76□□□□□ -0.53
SMARCA4-204ENST00000444061 SSX7Q7RTT5 188 aa11.76□□□□□ -0.53
SMARCA4-204ENST00000444061 H1FOOQ8IZA3 346 aaPredicted RBP11.76□□□□□ -0.53
SMARCA4-204ENST00000444061 YPEL2Q96QA6 119 aa11.76□□□□□ -0.53
SMARCA4-204ENST00000444061 ZNF331Q9NQX6 463 aaPredicted RBP11.76□□□□□ -0.53
SMARCA4-204ENST00000444061 RCC2Q9P258 522 aaKnown RBP11.76□□□□□ -0.53
SMARCA4-204ENST00000444061 KCNAB3O43448 404 aa11.76□□□□□ -0.53
SMARCA4-204ENST00000444061 SULT1A1P50225 295 aa11.76□□□□□ -0.53
SMARCA4-204ENST00000444061 ADORA2A-AS1P86434 159 aa11.76□□□□□ -0.53
SMARCA4-204ENST00000444061 TUSC1Q2TAM9 212 aa11.76□□□□□ -0.53
SMARCA4-204ENST00000444061 SLC16A13Q7RTY0 426 aa11.76□□□□□ -0.53
SMARCA4-204ENST00000444061 SLC35E3Q7Z769 313 aa11.76□□□□□ -0.53
SMARCA4-204ENST00000444061 MRPL20Q9BYC9 149 aaKnown RBP11.76□□□□□ -0.53
SMARCA4-204ENST00000444061 FABP4P15090 132 aa11.76□□□□□ -0.53
SMARCA4-204ENST00000444061 NPDC1Q9NQX5 325 aaPredicted RBP11.76□□□□□ -0.53
SMARCA4-204ENST00000444061 RPUSD1Q9UJJ7 312 aaKnown RBP11.76□□□□□ -0.53
SMARCA4-204ENST00000444061 MOSP00540 346 aa11.76□□□□□ -0.53
SMARCA4-204ENST00000444061 SUMO1P63165 101 aaKnown RBP11.76□□□□□ -0.53
SMARCA4-204ENST00000444061 PNRC1Q12796 327 aaPredicted RBP11.76□□□□□ -0.53
SMARCA4-204ENST00000444061 FAM89BQ8N5H3 189 aa11.76□□□□□ -0.53
SMARCA4-204ENST00000444061 RNF2Q99496 336 aa11.76□□□□□ -0.53
SMARCA4-204ENST00000444061 KIAA1324LA8MWY0 1029 aaPredicted RBP11.75□□□□□ -0.53
SMARCA4-204ENST00000444061 G3V3Q6 166 aa11.75□□□□□ -0.53
SMARCA4-204ENST00000444061 COL8A1P27658 744 aa11.75□□□□□ -0.53
SMARCA4-204ENST00000444061 AKR1C3P42330 323 aa11.75□□□□□ -0.53
SMARCA4-204ENST00000444061 EFNB3Q15768 340 aa11.75□□□□□ -0.53
SMARCA4-204ENST00000444061 VKORC1L1Q8N0U8 176 aa11.75□□□□□ -0.53
SMARCA4-204ENST00000444061 FAM24BQ8N5W8 94 aa11.75□□□□□ -0.53
SMARCA4-204ENST00000444061 SSMEM1Q8WWF3 244 aa11.75□□□□□ -0.53
SMARCA4-204ENST00000444061 LSM10Q969L4 123 aaKnown RBP11.75□□□□□ -0.53
SMARCA4-204ENST00000444061 VPS25Q9BRG1 176 aa11.75□□□□□ -0.53
SMARCA4-204ENST00000444061 WSB1Q9Y6I7 421 aa11.75□□□□□ -0.53
SMARCA4-204ENST00000444061 TLN1Q9Y490 2541 aaKnown RBP11.75□□□□□ -0.53
SMARCA4-204ENST00000444061 ZNF503-AS2A6NEH8 195 aa11.75□□□□□ -0.53
SMARCA4-204ENST00000444061 UBE2G2P60604 165 aa11.75□□□□□ -0.53
SMARCA4-204ENST00000444061 ZNF90Q03938 601 aa11.75□□□□□ -0.53
SMARCA4-204ENST00000444061 LINC01356Q8N9X3 169 aa11.75□□□□□ -0.53
SMARCA4-204ENST00000444061 SLC25A28Q96A46 364 aa11.75□□□□□ -0.53
SMARCA4-204ENST00000444061 C1QL1O75973 258 aa11.75□□□□□ -0.53
SMARCA4-204ENST00000444061 ITLN2Q8WWU7 325 aaPredicted RBP11.75□□□□□ -0.53
SMARCA4-204ENST00000444061 GPR146Q96CH1 333 aa11.75□□□□□ -0.53
SMARCA4-204ENST00000444061 LBHQ53QV2 105 aaPredicted RBP11.75□□□□□ -0.53
SMARCA4-204ENST00000444061 C5orf66Q9H5L9 145 aa11.75□□□□□ -0.53
SMARCA4-204ENST00000444061 CGAP01215 116 aa11.74□□□□□ -0.53
SMARCA4-204ENST00000444061 VSIG10L2P0DP72 767 aa11.74□□□□□ -0.53
SMARCA4-204ENST00000444061 NHLRC3Q5JS37 347 aa11.74□□□□□ -0.53
SMARCA4-204ENST00000444061 CD177Q8N6Q3 437 aa11.74□□□□□ -0.53
SMARCA4-204ENST00000444061 OR4X1Q8NH49 305 aa11.74□□□□□ -0.53
SMARCA4-204ENST00000444061 RABAC1Q9UI14 185 aa11.74□□□□□ -0.53
SMARCA4-204ENST00000444061 ZNF106Q9H2Y7 1883 aaKnown RBP11.74□□□□□ -0.53
SMARCA4-204ENST00000444061 B4DEV8 164 aa11.74□□□□□ -0.53
SMARCA4-204ENST00000444061 M0QZK8 103 aa11.74□□□□□ -0.53
SMARCA4-204ENST00000444061 PSPNO60542 156 aa11.74□□□□□ -0.53
SMARCA4-204ENST00000444061 GGCTO75223 188 aaKnown RBP11.74□□□□□ -0.53
SMARCA4-204ENST00000444061 AARDQ4LEZ3 155 aa11.74□□□□□ -0.53
SMARCA4-204ENST00000444061 TEPPQ6URK8 271 aa11.74□□□□□ -0.53
SMARCA4-204ENST00000444061 NR2C2APQ86WQ0 139 aa11.74□□□□□ -0.53
SMARCA4-204ENST00000444061 RBM14Q96PK6 669 aaKnown RBP11.74□□□□□ -0.53
SMARCA4-204ENST00000444061 ATP5SQ99766 215 aa11.74□□□□□ -0.53
SMARCA4-204ENST00000444061 TCF19Q9Y242 345 aa11.74□□□□□ -0.53
SMARCA4-204ENST00000444061 OR4A5Q8NH83 315 aa11.74□□□□□ -0.53
SMARCA4-204ENST00000444061 TNFRSF14Q92956 283 aa11.74□□□□□ -0.53
SMARCA4-204ENST00000444061 IL22RA2Q969J5 263 aa11.74□□□□□ -0.53
SMARCA4-204ENST00000444061 Q96MF0 132 aa11.74□□□□□ -0.53
SMARCA4-204ENST00000444061 TRBV6-7A0A0A0MS04 114 aa11.74□□□□□ -0.53
SMARCA4-204ENST00000444061 PF4P02776 101 aa11.74□□□□□ -0.53
SMARCA4-204ENST00000444061 NMBP08949 121 aa11.74□□□□□ -0.53
SMARCA4-204ENST00000444061 CDC34P49427 236 aaPredicted RBP11.74□□□□□ -0.53
SMARCA4-204ENST00000444061 MORN2Q502X0 79 aa11.74□□□□□ -0.53
SMARCA4-204ENST00000444061 SELENOHQ8IZQ5 122 aaKnown RBP11.74□□□□□ -0.53
SMARCA4-204ENST00000444061 SLC2A8Q9NY64 477 aa11.74□□□□□ -0.53
SMARCA4-204ENST00000444061 PIEZO2Q9H5I5 2752 aa11.73□□□□□ -0.53
SMARCA4-204ENST00000444061 F8VVB4 439 aa11.73□□□□□ -0.53
SMARCA4-204ENST00000444061 F8VWA3 439 aa11.73□□□□□ -0.53
SMARCA4-204ENST00000444061 J3QR89 54 aa11.73□□□□□ -0.53
SMARCA4-204ENST00000444061 COTL1Q14019 142 aa11.73□□□□□ -0.53
SMARCA4-204ENST00000444061 HEPN1Q6WQI6 88 aa11.73□□□□□ -0.53
SMARCA4-204ENST00000444061 FAM210BQ96KR6 192 aa11.73□□□□□ -0.53
SMARCA4-204ENST00000444061 TMEM208Q9BTX3 173 aa11.73□□□□□ -0.53
SMARCA4-204ENST00000444061 CNN1P51911 297 aaKnown RBP11.73□□□□□ -0.53
SMARCA4-204ENST00000444061 ATP5G2Q06055 141 aa11.73□□□□□ -0.53
SMARCA4-204ENST00000444061 TMEM200BQ69YZ2 307 aa11.73□□□□□ -0.53
SMARCA4-204ENST00000444061 LINC00518Q8N0U6 118 aa11.73□□□□□ -0.53
SMARCA4-204ENST00000444061 BLNKQ8WV28 456 aa11.73□□□□□ -0.53
SMARCA4-204ENST00000444061 MFSD2BA6NFX1 497 aa11.73□□□□□ -0.53
SMARCA4-204ENST00000444061 SOX15O60248 233 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms