RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 PDLIM3Q53GG5 364 aaPredicted RBP13.69□□□□□ -0.22
SEMA3B-207ENST00000441915 TREML4Q6UXN2 200 aa13.69□□□□□ -0.22
SEMA3B-207ENST00000441915 OR52E5Q8NH55 327 aa13.69□□□□□ -0.22
SEMA3B-207ENST00000441915 TMEM37Q8WXS4 190 aa13.69□□□□□ -0.22
SEMA3B-207ENST00000441915 PATZ1Q9HBE1 687 aaKnown RBP13.69□□□□□ -0.22
SEMA3B-207ENST00000441915 AQP7O14520 342 aa13.68□□□□□ -0.22
SEMA3B-207ENST00000441915 YPEL1O60688 119 aa13.68□□□□□ -0.22
SEMA3B-207ENST00000441915 CD99P14209 185 aa13.68□□□□□ -0.22
SEMA3B-207ENST00000441915 BMP5P22003 454 aa13.68□□□□□ -0.22
SEMA3B-207ENST00000441915 CD82P27701 267 aa13.68□□□□□ -0.22
SEMA3B-207ENST00000441915 GNB1P62873 340 aa13.68□□□□□ -0.22
SEMA3B-207ENST00000441915 LCN2P80188 198 aa13.68□□□□□ -0.22
SEMA3B-207ENST00000441915 C1orf174Q8IYL3 243 aa13.68□□□□□ -0.22
SEMA3B-207ENST00000441915 FDCSPQ8NFU4 85 aa13.68□□□□□ -0.22
SEMA3B-207ENST00000441915 FAM216AQ8WUB2 273 aa13.68□□□□□ -0.22
SEMA3B-207ENST00000441915 SARAFQ96BY9 339 aa13.68□□□□□ -0.22
SEMA3B-207ENST00000441915 YPEL2Q96QA6 119 aa13.68□□□□□ -0.22
SEMA3B-207ENST00000441915 SNHG12Q9BXW3 62 aa13.68□□□□□ -0.22
SEMA3B-207ENST00000441915 DUSP13Q9UII6 198 aa13.68□□□□□ -0.22
SEMA3B-207ENST00000441915 CACNA1GO43497 2377 aa13.68□□□□□ -0.22
SEMA3B-207ENST00000441915 NDUFB4O95168 129 aa13.68□□□□□ -0.22
SEMA3B-207ENST00000441915 EGR1P18146 543 aa13.68□□□□□ -0.22
SEMA3B-207ENST00000441915 OPRK1P41145 380 aa13.68□□□□□ -0.22
SEMA3B-207ENST00000441915 PDLIM4P50479 330 aa13.68□□□□□ -0.22
SEMA3B-207ENST00000441915 VKORC1L1Q8N0U8 176 aa13.68□□□□□ -0.22
SEMA3B-207ENST00000441915 NBEAQ8NFP9 2946 aa13.67□□□□□ -0.22
SEMA3B-207ENST00000441915 IGKV1D-17A0A075B6S4 117 aa13.67□□□□□ -0.22
SEMA3B-207ENST00000441915 IGHV1-18A0A0C4DH31 117 aa13.67□□□□□ -0.22
SEMA3B-207ENST00000441915 PRR33A8MZF0 331 aa13.67□□□□□ -0.22
SEMA3B-207ENST00000441915 SRRM5B3KS81 715 aa13.67□□□□□ -0.22
SEMA3B-207ENST00000441915 F6UZH7 168 aa13.67□□□□□ -0.22
SEMA3B-207ENST00000441915 RRHO14718 337 aa13.67□□□□□ -0.22
SEMA3B-207ENST00000441915 MGST3O14880 152 aa13.67□□□□□ -0.22
SEMA3B-207ENST00000441915 RBFOX2O43251 390 aaKnown RBP eCLIP13.67□□□□□ -0.227e-12■■□□□ 14.1
SEMA3B-207ENST00000441915 S1PR3Q99500 378 aa13.67□□□□□ -0.22
SEMA3B-207ENST00000441915 PLSCR4Q9NRQ2 329 aa13.67□□□□□ -0.22
SEMA3B-207ENST00000441915 SPENQ96T58 3664 aaKnown RBP13.67□□□□□ -0.22
SEMA3B-207ENST00000441915 NKX2-8O15522 239 aa13.67□□□□□ -0.22
SEMA3B-207ENST00000441915 RPL39P5Q59GN2 51 aa13.67□□□□□ -0.22
SEMA3B-207ENST00000441915 FAM78BQ5VT40 261 aa13.67□□□□□ -0.22
SEMA3B-207ENST00000441915 BTF3L4Q96K17 158 aa13.67□□□□□ -0.22
SEMA3B-207ENST00000441915 TXNDC17Q9BRA2 123 aa13.67□□□□□ -0.22
SEMA3B-207ENST00000441915 GALR2O43603 387 aaPredicted RBP13.66□□□□□ -0.22
SEMA3B-207ENST00000441915 GFRA3O60609 400 aa13.66□□□□□ -0.22
SEMA3B-207ENST00000441915 FAM90A1Q86YD7 464 aa13.66□□□□□ -0.22
SEMA3B-207ENST00000441915 Q8TCH9 128 aa13.66□□□□□ -0.22
SEMA3B-207ENST00000441915 SDSLQ96GA7 329 aa13.66□□□□□ -0.22
SEMA3B-207ENST00000441915 GOLT1BQ9Y3E0 138 aa13.66□□□□□ -0.22
SEMA3B-207ENST00000441915 DSPP15924 2871 aaKnown RBP13.66□□□□□ -0.22
SEMA3B-207ENST00000441915 VDAC2P45880 294 aaPredicted RBP13.66□□□□□ -0.22
SEMA3B-207ENST00000441915 TMPRSS3P57727 454 aa13.66□□□□□ -0.22
SEMA3B-207ENST00000441915 RELBQ01201 579 aa13.66□□□□□ -0.22
SEMA3B-207ENST00000441915 DERL1Q9BUN8 251 aa13.66□□□□□ -0.22
SEMA3B-207ENST00000441915 AURKAIP1Q9NWT8 199 aaPredicted RBP13.66□□□□□ -0.22
SEMA3B-207ENST00000441915 PXMP4Q9Y6I8 212 aa13.66□□□□□ -0.22
SEMA3B-207ENST00000441915 INTS1Q8N201 2190 aaKnown RBP13.66□□□□□ -0.22
SEMA3B-207ENST00000441915 M0R296 226 aa13.65□□□□□ -0.22
SEMA3B-207ENST00000441915 IGHV3-13P01766 116 aa13.65□□□□□ -0.22
SEMA3B-207ENST00000441915 IGHV3-7P01780 117 aa13.65□□□□□ -0.22
SEMA3B-207ENST00000441915 STAG3L2P0CL84 134 aa13.65□□□□□ -0.22
SEMA3B-207ENST00000441915 STAG3L3P0CL85 134 aa13.65□□□□□ -0.22
SEMA3B-207ENST00000441915 ARL14EPLP0DKL9 152 aa13.65□□□□□ -0.22
SEMA3B-207ENST00000441915 CR1LQ2VPA4 569 aa13.65□□□□□ -0.22
SEMA3B-207ENST00000441915 ABHD12Q8N2K0 398 aa13.65□□□□□ -0.22
SEMA3B-207ENST00000441915 MGST2Q99735 147 aa13.65□□□□□ -0.22
SEMA3B-207ENST00000441915 MS4A5Q9H3V2 200 aa13.65□□□□□ -0.22
SEMA3B-207ENST00000441915 TMEM140Q9NV12 185 aa13.65□□□□□ -0.22
SEMA3B-207ENST00000441915 ZNF705GA8MUZ8 300 aaPredicted RBP13.65□□□□□ -0.22
SEMA3B-207ENST00000441915 CRYABP02511 175 aaKnown RBP13.65□□□□□ -0.22
SEMA3B-207ENST00000441915 IL3RAP26951 378 aa13.65□□□□□ -0.22
SEMA3B-207ENST00000441915 ZNF134P52741 427 aa13.65□□□□□ -0.22
SEMA3B-207ENST00000441915 LOXL3P58215 753 aa13.65□□□□□ -0.22
SEMA3B-207ENST00000441915 GGTLC1Q9BX51 225 aa13.65□□□□□ -0.22
SEMA3B-207ENST00000441915 IFI27L2Q9H2X8 130 aa13.65□□□□□ -0.22
SEMA3B-207ENST00000441915 PROCRQ9UNN8 238 aa13.65□□□□□ -0.22
SEMA3B-207ENST00000441915 TRAV17A0A0B4J275 112 aa13.64□□□□□ -0.23
SEMA3B-207ENST00000441915 PRSS46E5RG02 174 aa13.64□□□□□ -0.23
SEMA3B-207ENST00000441915 M0R143 59 aa13.64□□□□□ -0.23
SEMA3B-207ENST00000441915 F2RL2O00254 374 aa13.64□□□□□ -0.23
SEMA3B-207ENST00000441915 DLEU1O43261 78 aa13.64□□□□□ -0.23
SEMA3B-207ENST00000441915 CXorf1O96002 111 aa13.64□□□□□ -0.23
SEMA3B-207ENST00000441915 GCGP01275 180 aa13.64□□□□□ -0.23
SEMA3B-207ENST00000441915 MIC13Q5XKP0 118 aa13.64□□□□□ -0.23
SEMA3B-207ENST00000441915 GCSAMQ8N6F7 178 aa13.64□□□□□ -0.23
SEMA3B-207ENST00000441915 ZNRF1Q8ND25 227 aa13.64□□□□□ -0.23
SEMA3B-207ENST00000441915 TMEM18Q96B42 140 aa13.64□□□□□ -0.23
SEMA3B-207ENST00000441915 IMMP2LQ96T52 175 aa13.64□□□□□ -0.23
SEMA3B-207ENST00000441915 NPVFQ9HCQ7 196 aa13.64□□□□□ -0.23
SEMA3B-207ENST00000441915 ZNF71Q9NQZ8 489 aaPredicted RBP13.64□□□□□ -0.23
SEMA3B-207ENST00000441915 ASPMQ8IZT6 3477 aa13.64□□□□□ -0.23
SEMA3B-207ENST00000441915 TRAV3A0A0B4J244 114 aa13.64□□□□□ -0.23
SEMA3B-207ENST00000441915 A0A0U1RQK1 487 aa13.64□□□□□ -0.23
SEMA3B-207ENST00000441915 ZNF320A2RRD8 509 aa13.64□□□□□ -0.23
SEMA3B-207ENST00000441915 KIR2DS2P43631 304 aa13.64□□□□□ -0.23
SEMA3B-207ENST00000441915 CNN1P51911 297 aaKnown RBP13.64□□□□□ -0.23
SEMA3B-207ENST00000441915 OPN3Q9H1Y3 402 aaPredicted RBP13.64□□□□□ -0.23
SEMA3B-207ENST00000441915 IGHV3OR15-7A0A075B7D8 119 aa13.63□□□□□ -0.23
SEMA3B-207ENST00000441915 C1QTNF9P0C862 333 aa13.63□□□□□ -0.23
SEMA3B-207ENST00000441915 CFHR2P36980 270 aa13.63□□□□□ -0.23
SEMA3B-207ENST00000441915 FOXL1Q12952 345 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms