RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 NPY1RP25929 384 aa4.92□□□□□ -1.62
VPS50-205ENST00000441602 DSCR9P59020 149 aa4.92□□□□□ -1.62
VPS50-205ENST00000441602 BRWD1-AS2P59051 145 aa4.92□□□□□ -1.62
VPS50-205ENST00000441602 RPL8P62917 257 aaKnown RBP4.92□□□□□ -1.62
VPS50-205ENST00000441602 LRRC75BQ2VPJ9 315 aa4.92□□□□□ -1.62
VPS50-205ENST00000441602 PDLIM3Q53GG5 364 aaPredicted RBP4.92□□□□□ -1.62
VPS50-205ENST00000441602 CLEC2AQ6UVW9 174 aa4.92□□□□□ -1.62
VPS50-205ENST00000441602 MMD2Q8IY49 270 aa4.92□□□□□ -1.62
VPS50-205ENST00000441602 PNKDQ8N490 385 aa4.92□□□□□ -1.62
VPS50-205ENST00000441602 TMEM167AQ8TBQ9 72 aa4.92□□□□□ -1.62
VPS50-205ENST00000441602 DPM3Q9P2X0 92 aa4.92□□□□□ -1.62
VPS50-205ENST00000441602 RAI1Q7Z5J4 1906 aaPredicted RBP4.91□□□□□ -1.62
VPS50-205ENST00000441602 DSCAMO60469 2012 aa4.91□□□□□ -1.62
VPS50-205ENST00000441602 UBE2L5PA0A1B0GUS4 154 aa4.91□□□□□ -1.62
VPS50-205ENST00000441602 SMCO3A2RU48 225 aa4.91□□□□□ -1.62
VPS50-205ENST00000441602 H2AFB1P0C5Y9 115 aa4.91□□□□□ -1.62
VPS50-205ENST00000441602 FAM157CP0CG43 387 aa4.91□□□□□ -1.62
VPS50-205ENST00000441602 FGF7P21781 194 aa4.91□□□□□ -1.62
VPS50-205ENST00000441602 MAS1LP35410 378 aa4.91□□□□□ -1.62
VPS50-205ENST00000441602 TEX45Q8NA69 505 aa4.91□□□□□ -1.62
VPS50-205ENST00000441602 SLC24A4Q8NFF2 622 aa4.91□□□□□ -1.62
VPS50-205ENST00000441602 OR4C12Q96R67 309 aa4.91□□□□□ -1.62
VPS50-205ENST00000441602 NARFLQ9H6Q4 476 aa4.91□□□□□ -1.62
VPS50-205ENST00000441602 ARFGEF3Q5TH69 2177 aa4.91□□□□□ -1.62
VPS50-205ENST00000441602 AKAP13Q12802 2813 aa4.91□□□□□ -1.62
VPS50-205ENST00000441602 ARG1P05089 322 aa4.91□□□□□ -1.62
VPS50-205ENST00000441602 SAA1P0DJI8 122 aaPredicted RBP4.91□□□□□ -1.62
VPS50-205ENST00000441602 REG1BP48304 166 aa4.91□□□□□ -1.62
VPS50-205ENST00000441602 PRCDQ00LT1 54 aa4.91□□□□□ -1.62
VPS50-205ENST00000441602 ACOT6Q3I5F7 207 aaPredicted RBP4.91□□□□□ -1.62
VPS50-205ENST00000441602 MINOS1Q5TGZ0 78 aa4.91□□□□□ -1.62
VPS50-205ENST00000441602 TAF15Q92804 592 aaKnown RBP eCLIP4.91□□□□□ -1.62
VPS50-205ENST00000441602 RBMXL1Q96E39 390 aaKnown RBP4.91□□□□□ -1.62
VPS50-205ENST00000441602 WDR61Q9GZS3 305 aaKnown RBP4.91□□□□□ -1.62
VPS50-205ENST00000441602 UNKLQ9H9P5 680 aaKnown RBP4.91□□□□□ -1.62
VPS50-205ENST00000441602 TMEM14BQ9NUH8 114 aa4.91□□□□□ -1.62
VPS50-205ENST00000441602 KIAA1456Q9P272 454 aa4.91□□□□□ -1.62
VPS50-205ENST00000441602 MINOS1-NBL1R4GNA1 71 aa4.91□□□□□ -1.62
VPS50-205ENST00000441602 HCFC1P51610 2035 aa4.91□□□□□ -1.62
VPS50-205ENST00000441602 A8MXK9 166 aa4.91□□□□□ -1.62
VPS50-205ENST00000441602 BUB1B-PAK6H3BSN5 160 aa4.91□□□□□ -1.62
VPS50-205ENST00000441602 IGHV2-5P01817 119 aa4.91□□□□□ -1.62
VPS50-205ENST00000441602 TAGLN2P37802 199 aaKnown RBP4.91□□□□□ -1.62
VPS50-205ENST00000441602 VDAC2P45880 294 aaPredicted RBP4.91□□□□□ -1.62
VPS50-205ENST00000441602 ARF6P62330 175 aa4.91□□□□□ -1.62
VPS50-205ENST00000441602 BTNL8Q6UX41 500 aa4.91□□□□□ -1.62
VPS50-205ENST00000441602 ST6GALNAC6Q969X2 333 aa4.91□□□□□ -1.62
VPS50-205ENST00000441602 REG4Q9BYZ8 158 aa4.91□□□□□ -1.62
VPS50-205ENST00000441602 SMDT1Q9H4I9 107 aa4.91□□□□□ -1.62
VPS50-205ENST00000441602 CACNA1AO00555 2505 aa4.9□□□□□ -1.62
VPS50-205ENST00000441602 PKDREJQ9NTG1 2253 aa4.9□□□□□ -1.62
VPS50-205ENST00000441602 C22orf46C9J442 243 aa4.9□□□□□ -1.62
VPS50-205ENST00000441602 FNDC10F2Z333 226 aa4.9□□□□□ -1.62
VPS50-205ENST00000441602 LY6HO94772 140 aa4.9□□□□□ -1.62
VPS50-205ENST00000441602 COMPP49747 757 aaPredicted RBP4.9□□□□□ -1.62
VPS50-205ENST00000441602 PLGLAQ15195 96 aa4.9□□□□□ -1.62
VPS50-205ENST00000441602 TMEM41BQ5BJD5 291 aa4.9□□□□□ -1.62
VPS50-205ENST00000441602 TPTE2P1Q5T6R2 138 aa4.9□□□□□ -1.62
VPS50-205ENST00000441602 VKORC1L1Q8N0U8 176 aa4.9□□□□□ -1.62
VPS50-205ENST00000441602 OR11H6Q8NGC7 330 aa4.9□□□□□ -1.62
VPS50-205ENST00000441602 C22orf15Q8WYQ4 148 aa4.9□□□□□ -1.62
VPS50-205ENST00000441602 FAM168AQ92567 244 aa4.9□□□□□ -1.62
VPS50-205ENST00000441602 ZDHHC16Q969W1 377 aa4.9□□□□□ -1.62
VPS50-205ENST00000441602 SLC35E1Q96K37 410 aa4.9□□□□□ -1.62
VPS50-205ENST00000441602 ACTR3CQ9C0K3 210 aaPredicted RBP4.9□□□□□ -1.62
VPS50-205ENST00000441602 LPAR2Q9HBW0 351 aa4.9□□□□□ -1.62
VPS50-205ENST00000441602 TPRP12270 2363 aaKnown RBP4.9□□□□□ -1.62
VPS50-205ENST00000441602 VPS13AQ96RL7 3174 aa4.9□□□□□ -1.62
VPS50-205ENST00000441602 OVOL3O00110 214 aa4.9□□□□□ -1.63
VPS50-205ENST00000441602 CYB5BO43169 146 aa4.9□□□□□ -1.63
VPS50-205ENST00000441602 IGLV1-47P01700 117 aa4.9□□□□□ -1.63
VPS50-205ENST00000441602 CD1BP29016 333 aa4.9□□□□□ -1.63
VPS50-205ENST00000441602 DVL1P1P54792 670 aaPredicted RBP4.9□□□□□ -1.63
VPS50-205ENST00000441602 ATP5J2P56134 94 aa4.9□□□□□ -1.63
VPS50-205ENST00000441602 LINC00205P59089 165 aa4.9□□□□□ -1.63
VPS50-205ENST00000441602 AKR1C1Q04828 323 aa4.9□□□□□ -1.63
VPS50-205ENST00000441602 SPINK9Q5DT21 86 aa4.9□□□□□ -1.63
VPS50-205ENST00000441602 ZNF843Q8N446 348 aa4.9□□□□□ -1.63
VPS50-205ENST00000441602 VCANP13611 3396 aa4.9□□□□□ -1.63
VPS50-205ENST00000441602 PIEZO2Q9H5I5 2752 aa4.9□□□□□ -1.63
VPS50-205ENST00000441602 ROS1P08922 2347 aa4.9□□□□□ -1.63
VPS50-205ENST00000441602 IGHV1-3A0A0C4DH29 117 aa4.89□□□□□ -1.63
VPS50-205ENST00000441602 C15orf62A8K5M9 175 aa4.89□□□□□ -1.63
VPS50-205ENST00000441602 RPL27AP46776 148 aaKnown RBP4.89□□□□□ -1.63
VPS50-205ENST00000441602 PPT1P50897 306 aa4.89□□□□□ -1.63
VPS50-205ENST00000441602 ETFRF1Q6IPR1 90 aa4.89□□□□□ -1.63
VPS50-205ENST00000441602 SH3BGRL3Q9H299 93 aa4.89□□□□□ -1.63
VPS50-205ENST00000441602 SLC39A9Q9NUM3 307 aa4.89□□□□□ -1.63
VPS50-205ENST00000441602 TBL2Q9Y4P3 447 aaKnown RBP4.89□□□□□ -1.63
VPS50-205ENST00000441602 ARID1AO14497 2285 aa4.89□□□□□ -1.63
VPS50-205ENST00000441602 IGHV2-70DA0A0C4DH43 119 aa4.89□□□□□ -1.63
VPS50-205ENST00000441602 RNASEK-C17orf49H0YIS7 233 aa4.89□□□□□ -1.63
VPS50-205ENST00000441602 FCN3O75636 299 aa4.89□□□□□ -1.63
VPS50-205ENST00000441602 MT-CO2P00403 227 aa4.89□□□□□ -1.63
VPS50-205ENST00000441602 BRS3P32247 399 aa4.89□□□□□ -1.63
VPS50-205ENST00000441602 C2orf83Q53S99 150 aa4.89□□□□□ -1.63
VPS50-205ENST00000441602 ZNF295-AS1Q8N0V1 137 aa4.89□□□□□ -1.63
VPS50-205ENST00000441602 CLDND2Q8NHS1 167 aa4.89□□□□□ -1.63
VPS50-205ENST00000441602 EIF5A2Q9GZV4 153 aaKnown RBP4.89□□□□□ -1.63
VPS50-205ENST00000441602 NPVFQ9HCQ7 196 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms