RNA–Protein interactions for RNA: ENST00000441556.5

CTTNBP2-206, Transcript of cortactin binding protein 2, humanhuman

TSL 5

Gene CTTNBP2, Length 5,517 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTNBP2-206ENST00000441556 MRPL37Q9BZE1 423 aaKnown RBP12.85□□□□□ -0.35
CTTNBP2-206ENST00000441556 IGKV3-7A0A075B6H7 116 aa12.85□□□□□ -0.35
CTTNBP2-206ENST00000441556 TRBV23-1A0A0A0MS06 115 aa12.85□□□□□ -0.35
CTTNBP2-206ENST00000441556 REG1AP05451 166 aa12.85□□□□□ -0.35
CTTNBP2-206ENST00000441556 SNRPCP09234 159 aaKnown RBP12.85□□□□□ -0.35
CTTNBP2-206ENST00000441556 MEF2CQ06413 473 aaPredicted RBP12.85□□□□□ -0.35
CTTNBP2-206ENST00000441556 HLA-DRB5Q30154 266 aa12.85□□□□□ -0.35
CTTNBP2-206ENST00000441556 MDC1Q14676 2089 aaKnown RBP12.85□□□□□ -0.35
CTTNBP2-206ENST00000441556 ZNF253O75346 499 aa12.85□□□□□ -0.35
CTTNBP2-206ENST00000441556 ZNF497Q6ZNH5 498 aa12.85□□□□□ -0.35
CTTNBP2-206ENST00000441556 TMEM56-RWDD3S4R434 201 aa12.85□□□□□ -0.35
CTTNBP2-206ENST00000441556 IGKV1-12A0A0C4DH73 117 aa12.84□□□□□ -0.35
CTTNBP2-206ENST00000441556 LY6G6EA0A0G2JKS1 128 aa12.84□□□□□ -0.35
CTTNBP2-206ENST00000441556 IGKV1D-12P01611 117 aa12.84□□□□□ -0.35
CTTNBP2-206ENST00000441556 IER3P46695 156 aa12.84□□□□□ -0.35
CTTNBP2-206ENST00000441556 GBGT1Q8N5D6 347 aa12.84□□□□□ -0.35
CTTNBP2-206ENST00000441556 U3KQA8 63 aa12.84□□□□□ -0.35
CTTNBP2-206ENST00000441556 IGKV1D-13A0A0B4J2D9 117 aa12.84□□□□□ -0.35
CTTNBP2-206ENST00000441556 F5H697 171 aa12.84□□□□□ -0.35
CTTNBP2-206ENST00000441556 TCAPO15273 167 aa12.84□□□□□ -0.35
CTTNBP2-206ENST00000441556 IGKV1-13P0DP09 117 aa12.84□□□□□ -0.35
CTTNBP2-206ENST00000441556 ATP5IP56385 69 aaPredicted RBP12.84□□□□□ -0.35
CTTNBP2-206ENST00000441556 FAM3BP58499 235 aaPredicted RBP12.84□□□□□ -0.35
CTTNBP2-206ENST00000441556 PRNTQ86SH4 94 aa12.84□□□□□ -0.35
CTTNBP2-206ENST00000441556 ARL14EPLP0DKL9 152 aa12.84□□□□□ -0.35
CTTNBP2-206ENST00000441556 OSR1Q8TAX0 266 aaPredicted RBP12.84□□□□□ -0.35
CTTNBP2-206ENST00000441556 NEU4Q8WWR8 484 aaPredicted RBP12.84□□□□□ -0.35
CTTNBP2-206ENST00000441556 RNASE6Q93091 150 aaKnown RBP12.84□□□□□ -0.35
CTTNBP2-206ENST00000441556 DNAJC4Q9NNZ3 241 aa12.84□□□□□ -0.35
CTTNBP2-206ENST00000441556 FREM3P0C091 2139 aa12.84□□□□□ -0.35
CTTNBP2-206ENST00000441556 TGIF2-C20orf24A0A0A6YYL0 155 aa12.84□□□□□ -0.35
CTTNBP2-206ENST00000441556 AMTP48728 403 aa12.84□□□□□ -0.35
CTTNBP2-206ENST00000441556 WDR31Q8NA23 367 aa12.84□□□□□ -0.35
CTTNBP2-206ENST00000441556 SNRNP40Q96DI7 357 aaKnown RBP12.84□□□□□ -0.35
CTTNBP2-206ENST00000441556 C18orf12Q96KH6 178 aa12.84□□□□□ -0.35
CTTNBP2-206ENST00000441556 CCL19Q99731 98 aa12.84□□□□□ -0.35
CTTNBP2-206ENST00000441556 LINC00312Q9Y6C7 94 aa12.84□□□□□ -0.35
CTTNBP2-206ENST00000441556 SNURFLB1AK76 121 aa12.84□□□□□ -0.35
CTTNBP2-206ENST00000441556 LDLRAD4O15165 306 aa12.84□□□□□ -0.35
CTTNBP2-206ENST00000441556 PLAURQ03405 335 aa12.84□□□□□ -0.35
CTTNBP2-206ENST00000441556 HIST3H3Q16695 136 aa12.84□□□□□ -0.35
CTTNBP2-206ENST00000441556 UFC1Q9Y3C8 167 aa12.84□□□□□ -0.35
CTTNBP2-206ENST00000441556 CA2P00918 260 aa12.83□□□□□ -0.36
CTTNBP2-206ENST00000441556 LOXL3P58215 753 aa12.83□□□□□ -0.36
CTTNBP2-206ENST00000441556 SGMS2Q8NHU3 365 aa12.83□□□□□ -0.36
CTTNBP2-206ENST00000441556 GOLT1BQ9Y3E0 138 aa12.83□□□□□ -0.36
CTTNBP2-206ENST00000441556 PPOXP50336 477 aa12.83□□□□□ -0.36
CTTNBP2-206ENST00000441556 MFAP4P55083 255 aa12.83□□□□□ -0.36
CTTNBP2-206ENST00000441556 DNM1P46Q6ZS02 220 aa12.83□□□□□ -0.36
CTTNBP2-206ENST00000441556 PLSCR4Q9NRQ2 329 aa12.83□□□□□ -0.36
CTTNBP2-206ENST00000441556 NOTCH4Q99466 2003 aa12.83□□□□□ -0.36
CTTNBP2-206ENST00000441556 CXorf65A6NEN9 183 aa12.83□□□□□ -0.36
CTTNBP2-206ENST00000441556 FOXH1O75593 365 aa12.83□□□□□ -0.36
CTTNBP2-206ENST00000441556 C8orf88P0DMB2 117 aa12.83□□□□□ -0.36
CTTNBP2-206ENST00000441556 FCER1GP30273 86 aa12.83□□□□□ -0.36
CTTNBP2-206ENST00000441556 GLRX5Q86SX6 157 aa12.83□□□□□ -0.36
CTTNBP2-206ENST00000441556 CDX1P47902 265 aaPredicted RBP12.83□□□□□ -0.36
CTTNBP2-206ENST00000441556 IGKV1D-8A0A087WSZ0 117 aa12.82□□□□□ -0.36
CTTNBP2-206ENST00000441556 TIMP3P35625 211 aa12.82□□□□□ -0.36
CTTNBP2-206ENST00000441556 EP300Q09472 2414 aaPredicted RBP12.82□□□□□ -0.36
CTTNBP2-206ENST00000441556 J3KRW8 73 aa12.82□□□□□ -0.36
CTTNBP2-206ENST00000441556 ISLRO14498 428 aa12.82□□□□□ -0.36
CTTNBP2-206ENST00000441556 OR4A47Q6IF82 309 aa12.82□□□□□ -0.36
CTTNBP2-206ENST00000441556 RABAC1Q9UI14 185 aa12.82□□□□□ -0.36
CTTNBP2-206ENST00000441556 IL18BPO95998 194 aa12.82□□□□□ -0.36
CTTNBP2-206ENST00000441556 RPL30P62888 115 aaKnown RBP12.82□□□□□ -0.36
CTTNBP2-206ENST00000441556 STPG3Q8N7X2 389 aa12.82□□□□□ -0.36
CTTNBP2-206ENST00000441556 IGKV1-27A0A075B6S5 117 aa12.82□□□□□ -0.36
CTTNBP2-206ENST00000441556 KIR2DL2P43627 348 aaPredicted RBP12.82□□□□□ -0.36
CTTNBP2-206ENST00000441556 BPIFA4PQ86YQ2 179 aa12.82□□□□□ -0.36
CTTNBP2-206ENST00000441556 VPS25Q9BRG1 176 aa12.82□□□□□ -0.36
CTTNBP2-206ENST00000441556 TMEM208Q9BTX3 173 aa12.82□□□□□ -0.36
CTTNBP2-206ENST00000441556 SSBP3Q9BWW4 388 aaPredicted RBP12.82□□□□□ -0.36
CTTNBP2-206ENST00000441556 TRAV30A0A087WSZ9 112 aa12.81□□□□□ -0.36
CTTNBP2-206ENST00000441556 CSN3P07498 182 aa12.81□□□□□ -0.36
CTTNBP2-206ENST00000441556 C19orf24Q9BVV8 132 aa12.81□□□□□ -0.36
CTTNBP2-206ENST00000441556 APC2O95996 2303 aa12.81□□□□□ -0.36
CTTNBP2-206ENST00000441556 DNAJC13O75165 2243 aa12.81□□□□□ -0.36
CTTNBP2-206ENST00000441556 C5orf63A6NC05 138 aa12.81□□□□□ -0.36
CTTNBP2-206ENST00000441556 FXYD3Q14802 87 aa12.81□□□□□ -0.36
CTTNBP2-206ENST00000441556 FAM166AQ6J272 317 aa12.81□□□□□ -0.36
CTTNBP2-206ENST00000441556 NABP2Q9BQ15 211 aa12.81□□□□□ -0.36
CTTNBP2-206ENST00000441556 M0R2Z0 102 aa12.81□□□□□ -0.36
CTTNBP2-206ENST00000441556 ACAA1P09110 424 aaPredicted RBP12.81□□□□□ -0.36
CTTNBP2-206ENST00000441556 PF4V1P10720 104 aa12.81□□□□□ -0.36
CTTNBP2-206ENST00000441556 OR2D3Q8NGH3 330 aa12.81□□□□□ -0.36
CTTNBP2-206ENST00000441556 PGPA6NDG6 321 aa12.81□□□□□ -0.36
CTTNBP2-206ENST00000441556 NPIPB11E5RHQ5 1161 aa12.81□□□□□ -0.36
CTTNBP2-206ENST00000441556 E9PLN8 166 aa12.81□□□□□ -0.36
CTTNBP2-206ENST00000441556 APCSP02743 223 aa12.81□□□□□ -0.36
CTTNBP2-206ENST00000441556 NPIPB3Q92617 1050 aa12.81□□□□□ -0.36
CTTNBP2-206ENST00000441556 SPSB4Q96A44 273 aa12.81□□□□□ -0.36
CTTNBP2-206ENST00000441556 VKORC1Q9BQB6 163 aa12.81□□□□□ -0.36
CTTNBP2-206ENST00000441556 TRAV34A0A0B4J273 112 aa12.81□□□□□ -0.36
CTTNBP2-206ENST00000441556 M0QZK8 103 aa12.81□□□□□ -0.36
CTTNBP2-206ENST00000441556 BMPR1BO00238 502 aa12.81□□□□□ -0.36
CTTNBP2-206ENST00000441556 GGCTO75223 188 aaKnown RBP12.81□□□□□ -0.36
CTTNBP2-206ENST00000441556 NPCDR1Q9BY65 106 aa12.81□□□□□ -0.36
CTTNBP2-206ENST00000441556 CNOT1A5YKK6 2376 aaKnown RBP12.8□□□□□ -0.36
CTTNBP2-206ENST00000441556 YPEL1O60688 119 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms