RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 ZNF735P0CB33 412 aa12.39□□□□□ -0.43
SNRPD3-204ENST00000439775 FCGR2CP31995 323 aa12.39□□□□□ -0.43
SNRPD3-204ENST00000439775 CBX5P45973 191 aa12.39□□□□□ -0.43
SNRPD3-204ENST00000439775 RPL27AP46776 148 aaKnown RBP12.39□□□□□ -0.43
SNRPD3-204ENST00000439775 LCN12Q6JVE5 192 aa12.39□□□□□ -0.43
SNRPD3-204ENST00000439775 CROCCP3Q8IVE0 287 aa12.39□□□□□ -0.43
SNRPD3-204ENST00000439775 ZBTB34Q8NCN2 500 aa12.39□□□□□ -0.43
SNRPD3-204ENST00000439775 SECTM1Q8WVN6 248 aa12.39□□□□□ -0.43
SNRPD3-204ENST00000439775 ZMAT4Q9H898 229 aa12.39□□□□□ -0.43
SNRPD3-204ENST00000439775 C19orf73Q9NVV2 129 aa12.39□□□□□ -0.43
SNRPD3-204ENST00000439775 RBFOX2O43251 390 aaKnown RBP eCLIP12.38□□□□□ -0.434e-7■□□□□ 8.3
SNRPD3-204ENST00000439775 AIREO43918 545 aa12.38□□□□□ -0.43
SNRPD3-204ENST00000439775 PTHLHP12272 177 aa12.38□□□□□ -0.43
SNRPD3-204ENST00000439775 C15orf32Q32M92 178 aa12.38□□□□□ -0.43
SNRPD3-204ENST00000439775 Q8N402 240 aa12.38□□□□□ -0.43
SNRPD3-204ENST00000439775 OR2K2Q8NGT1 345 aa12.38□□□□□ -0.43
SNRPD3-204ENST00000439775 TM2D3Q9BRN9 247 aa12.38□□□□□ -0.43
SNRPD3-204ENST00000439775 AIFM2Q9BRQ8 373 aa12.38□□□□□ -0.43
SNRPD3-204ENST00000439775 THAP7Q9BT49 309 aaPredicted RBP12.38□□□□□ -0.43
SNRPD3-204ENST00000439775 CCL28Q9NRJ3 127 aa12.38□□□□□ -0.43
SNRPD3-204ENST00000439775 SLC2A9Q9NRM0 540 aa12.38□□□□□ -0.43
SNRPD3-204ENST00000439775 HMX3A6NHT5 357 aa12.37□□□□□ -0.43
SNRPD3-204ENST00000439775 TNFSF12O43508 249 aa12.37□□□□□ -0.43
SNRPD3-204ENST00000439775 XRCC3O43542 346 aa12.37□□□□□ -0.43
SNRPD3-204ENST00000439775 IL6RP08887 468 aaPredicted RBP12.37□□□□□ -0.43
SNRPD3-204ENST00000439775 RPL8P62917 257 aaKnown RBP12.37□□□□□ -0.43
SNRPD3-204ENST00000439775 CATR1Q13166 79 aa12.37□□□□□ -0.43
SNRPD3-204ENST00000439775 KLK9Q2XQG4 91 aa12.37□□□□□ -0.43
SNRPD3-204ENST00000439775 OR5AP2Q8NGF4 316 aa12.37□□□□□ -0.43
SNRPD3-204ENST00000439775 OR4A5Q8NH83 315 aa12.37□□□□□ -0.43
SNRPD3-204ENST00000439775 MUC7Q8TAX7 377 aa12.37□□□□□ -0.43
SNRPD3-204ENST00000439775 GIMAP1Q8WWP7 306 aa12.37□□□□□ -0.43
SNRPD3-204ENST00000439775 GPHA2Q96T91 129 aa12.37□□□□□ -0.43
SNRPD3-204ENST00000439775 BET1LQ9NYM9 111 aa12.37□□□□□ -0.43
SNRPD3-204ENST00000439775 KLK9Q9UKQ9 250 aa12.37□□□□□ -0.43
SNRPD3-204ENST00000439775 A0A1B0GW64 132 aa12.36□□□□□ -0.43
SNRPD3-204ENST00000439775 DPPA5A6NC42 116 aa12.36□□□□□ -0.43
SNRPD3-204ENST00000439775 E7EUB6 86 aa12.36□□□□□ -0.43
SNRPD3-204ENST00000439775 OR2J3O76001 311 aa12.36□□□□□ -0.43
SNRPD3-204ENST00000439775 CRYGCP07315 174 aa12.36□□□□□ -0.43
SNRPD3-204ENST00000439775 FGF2P09038 288 aa12.36□□□□□ -0.43
SNRPD3-204ENST00000439775 MECP2P51608 486 aaKnown RBP12.36□□□□□ -0.43
SNRPD3-204ENST00000439775 UBE2NLQ5JXB2 153 aa12.36□□□□□ -0.43
SNRPD3-204ENST00000439775 GTSCR1Q86UQ5 136 aa12.36□□□□□ -0.43
SNRPD3-204ENST00000439775 SPAG16Q8N0X2 631 aa12.36□□□□□ -0.43
SNRPD3-204ENST00000439775 KCTD12Q96CX2 325 aaKnown RBP12.36□□□□□ -0.43
SNRPD3-204ENST00000439775 SLC5A7Q9GZV3 580 aa12.36□□□□□ -0.43
SNRPD3-204ENST00000439775 RYR3Q15413 4870 aa12.36□□□□□ -0.43
SNRPD3-204ENST00000439775 DHFRP00374 187 aa12.35□□□□□ -0.43
SNRPD3-204ENST00000439775 AREGP15514 252 aa12.35□□□□□ -0.43
SNRPD3-204ENST00000439775 HLA-GP17693 338 aa12.35□□□□□ -0.43
SNRPD3-204ENST00000439775 PSMB6P28072 239 aa12.35□□□□□ -0.43
SNRPD3-204ENST00000439775 TGFBR1P36897 503 aa12.35□□□□□ -0.43
SNRPD3-204ENST00000439775 TAS2R31P59538 309 aa12.35□□□□□ -0.43
SNRPD3-204ENST00000439775 POU2AF1Q16633 256 aa12.35□□□□□ -0.43
SNRPD3-204ENST00000439775 OR4A47Q6IF82 309 aa12.35□□□□□ -0.43
SNRPD3-204ENST00000439775 ZNF818PQ6ZRF7 136 aa12.35□□□□□ -0.43
SNRPD3-204ENST00000439775 SSX9Q7RTT3 188 aa12.35□□□□□ -0.43
SNRPD3-204ENST00000439775 BORCS5Q969J3 196 aa12.35□□□□□ -0.43
SNRPD3-204ENST00000439775 YIPF6Q96EC8 236 aa12.35□□□□□ -0.43
SNRPD3-204ENST00000439775 S100A16Q96FQ6 103 aaKnown RBP12.35□□□□□ -0.43
SNRPD3-204ENST00000439775 FANCD2OSQ96PS1 177 aa12.35□□□□□ -0.43
SNRPD3-204ENST00000439775 FYTTD1Q96QD9 318 aaKnown RBP12.35□□□□□ -0.43
SNRPD3-204ENST00000439775 VCX3AQ9NNX9 186 aa12.35□□□□□ -0.43
SNRPD3-204ENST00000439775 IFT46Q9NQC8 304 aa12.35□□□□□ -0.43
SNRPD3-204ENST00000439775 FBXL7Q9UJT9 491 aa12.35□□□□□ -0.43
SNRPD3-204ENST00000439775 ANAPC10Q9UM13 185 aa12.35□□□□□ -0.43
SNRPD3-204ENST00000439775 DMRT1Q9Y5R6 373 aa12.35□□□□□ -0.43
SNRPD3-204ENST00000439775 SULT1C2O00338 296 aa12.34□□□□□ -0.43
SNRPD3-204ENST00000439775 GGCTO75223 188 aaKnown RBP12.34□□□□□ -0.43
SNRPD3-204ENST00000439775 HPRT1P00492 218 aa12.34□□□□□ -0.43
SNRPD3-204ENST00000439775 CTRB1P17538 263 aa12.34□□□□□ -0.43
SNRPD3-204ENST00000439775 FXYD4P59646 89 aa12.34□□□□□ -0.43
SNRPD3-204ENST00000439775 CTRB2Q6GPI1 263 aa12.34□□□□□ -0.43
SNRPD3-204ENST00000439775 ADAMTSL5Q6ZMM2 481 aa12.34□□□□□ -0.43
SNRPD3-204ENST00000439775 C19orf35Q6ZS72 473 aa12.34□□□□□ -0.43
SNRPD3-204ENST00000439775 LAX1Q8IWV1 398 aa12.34□□□□□ -0.43
SNRPD3-204ENST00000439775 CD300LFQ8TDQ1 290 aa12.34□□□□□ -0.43
SNRPD3-204ENST00000439775 CCDC140Q96MF4 163 aa12.34□□□□□ -0.43
SNRPD3-204ENST00000439775 CITED4Q96RK1 184 aa12.34□□□□□ -0.43
SNRPD3-204ENST00000439775 A0A087WXM4 84 aa12.33□□□□□ -0.44
SNRPD3-204ENST00000439775 IZUMO1RA6ND01 250 aa12.33□□□□□ -0.44
SNRPD3-204ENST00000439775 CGB1A6NKQ9 187 aa12.33□□□□□ -0.44
SNRPD3-204ENST00000439775 PPP5D1E7EU14 171 aa12.33□□□□□ -0.44
SNRPD3-204ENST00000439775 LGALS9O00182 355 aa12.33□□□□□ -0.44
SNRPD3-204ENST00000439775 TNFAIP8O95379 198 aa12.33□□□□□ -0.44
SNRPD3-204ENST00000439775 FCER2P06734 321 aa12.33□□□□□ -0.44
SNRPD3-204ENST00000439775 NQO2P16083 231 aa12.33□□□□□ -0.44
SNRPD3-204ENST00000439775 HIST1H1BP16401 226 aaKnown RBP12.33□□□□□ -0.44
SNRPD3-204ENST00000439775 RPS19P39019 145 aaKnown RBP12.33□□□□□ -0.44
SNRPD3-204ENST00000439775 HERV-K104P61576 105 aa12.33□□□□□ -0.44
SNRPD3-204ENST00000439775 TMEM69Q5SWH9 247 aa12.33□□□□□ -0.44
SNRPD3-204ENST00000439775 TMEM17Q86X19 198 aa12.33□□□□□ -0.44
SNRPD3-204ENST00000439775 SAMD12Q8N8I0 201 aa12.33□□□□□ -0.44
SNRPD3-204ENST00000439775 SRSF8Q9BRL6 282 aaKnown RBP12.33□□□□□ -0.44
SNRPD3-204ENST00000439775 PLEKHA2Q9HB19 425 aa12.33□□□□□ -0.44
SNRPD3-204ENST00000439775 HRASLSQ9HDD0 168 aa12.33□□□□□ -0.44
SNRPD3-204ENST00000439775 EHFQ9NZC4 300 aa12.33□□□□□ -0.44
SNRPD3-204ENST00000439775 COMMD9Q9P000 198 aa12.33□□□□□ -0.44
SNRPD3-204ENST00000439775 DNAH7Q8WXX0 4024 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms