RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 PPP1R1AQ13522 171 aa13.92□□□□□ -0.18
CCDC188-201ENST00000439765 TCTEX1D1Q8N7M0 179 aa13.92□□□□□ -0.18
CCDC188-201ENST00000439765 FLYWCH2Q96CP2 140 aaKnown RBP13.92□□□□□ -0.18
CCDC188-201ENST00000439765 GALNT14Q96FL9 552 aa13.92□□□□□ -0.18
CCDC188-201ENST00000439765 PRELID3BQ9Y3B1 194 aa13.92□□□□□ -0.18
CCDC188-201ENST00000439765 C9orf170A2RU37 121 aa13.91□□□□□ -0.18
CCDC188-201ENST00000439765 PRAF2O60831 178 aa13.91□□□□□ -0.18
CCDC188-201ENST00000439765 SFT2D2O95562 160 aa13.91□□□□□ -0.18
CCDC188-201ENST00000439765 BRWD1-AS2P59051 145 aa13.91□□□□□ -0.18
CCDC188-201ENST00000439765 RTL8BQ17RB0 113 aa13.91□□□□□ -0.18
CCDC188-201ENST00000439765 C4orf46Q504U0 113 aa13.91□□□□□ -0.18
CCDC188-201ENST00000439765 OR2B11Q5JQS5 317 aa13.91□□□□□ -0.18
CCDC188-201ENST00000439765 FAM110DQ8TAY7 271 aaPredicted RBP13.91□□□□□ -0.18
CCDC188-201ENST00000439765 HARBI1Q96MB7 349 aa13.91□□□□□ -0.18
CCDC188-201ENST00000439765 TP53RKQ96S44 253 aa13.91□□□□□ -0.18
CCDC188-201ENST00000439765 PARP11Q9NR21 331 aa13.91□□□□□ -0.18
CCDC188-201ENST00000439765 TPSG1Q9NRR2 321 aa13.91□□□□□ -0.18
CCDC188-201ENST00000439765 METTL1Q9UBP6 276 aaKnown RBP13.91□□□□□ -0.18
CCDC188-201ENST00000439765 ADARB2-AS1A8MUL3 147 aa13.9□□□□□ -0.18
CCDC188-201ENST00000439765 H0Y980 276 aa13.9□□□□□ -0.18
CCDC188-201ENST00000439765 ATP6V0E1O15342 81 aa13.9□□□□□ -0.18
CCDC188-201ENST00000439765 B3GALNT1O75752 331 aa13.9□□□□□ -0.18
CCDC188-201ENST00000439765 OR5AC1P0C628 307 aa13.9□□□□□ -0.18
CCDC188-201ENST00000439765 VAMP1P23763 118 aa13.9□□□□□ -0.18
CCDC188-201ENST00000439765 SLC35B1P78383 322 aa13.9□□□□□ -0.18
CCDC188-201ENST00000439765 NDPQ00604 133 aa13.9□□□□□ -0.18
CCDC188-201ENST00000439765 CBX3Q13185 183 aa13.9□□□□□ -0.18
CCDC188-201ENST00000439765 DHRS2Q13268 280 aa13.9□□□□□ -0.18
CCDC188-201ENST00000439765 SP6Q3SY56 376 aa13.9□□□□□ -0.18
CCDC188-201ENST00000439765 LIN54Q6MZP7 749 aa13.9□□□□□ -0.18
CCDC188-201ENST00000439765 LYG2Q86SG7 212 aa13.9□□□□□ -0.18
CCDC188-201ENST00000439765 NDUFA11Q86Y39 141 aa13.9□□□□□ -0.18
CCDC188-201ENST00000439765 SPAG16Q8N0X2 631 aa13.9□□□□□ -0.18
CCDC188-201ENST00000439765 TSNAXQ99598 290 aaKnown RBP13.9□□□□□ -0.18
CCDC188-201ENST00000439765 FAM212BQ9NTI7 297 aaPredicted RBP13.9□□□□□ -0.18
CCDC188-201ENST00000439765 IGHV7-81A0A0B4J1V7 117 aa13.89□□□□□ -0.19
CCDC188-201ENST00000439765 TCRBV4S1A1TA0A5B7 111 aa13.89□□□□□ -0.19
CCDC188-201ENST00000439765 SLC25A17O43808 307 aa13.89□□□□□ -0.19
CCDC188-201ENST00000439765 FCGR3BO75015 233 aa13.89□□□□□ -0.19
CCDC188-201ENST00000439765 CRYZL1O95825 349 aa13.89□□□□□ -0.19
CCDC188-201ENST00000439765 HLA-AP01891 365 aaKnown RBP13.89□□□□□ -0.19
CCDC188-201ENST00000439765 RRASP10301 218 aa13.89□□□□□ -0.19
CCDC188-201ENST00000439765 ANXA3P12429 323 aa13.89□□□□□ -0.19
CCDC188-201ENST00000439765 KIR2DS2P43631 304 aa13.89□□□□□ -0.19
CCDC188-201ENST00000439765 CD83Q01151 205 aa13.89□□□□□ -0.19
CCDC188-201ENST00000439765 TMEM187Q14656 261 aa13.89□□□□□ -0.19
CCDC188-201ENST00000439765 PSG5Q15238 335 aa13.89□□□□□ -0.19
CCDC188-201ENST00000439765 ZNF585BQ52M93 769 aa13.89□□□□□ -0.19
CCDC188-201ENST00000439765 OR52B4Q8NGK2 314 aa13.89□□□□□ -0.19
CCDC188-201ENST00000439765 CD300LFQ8TDQ1 290 aa13.89□□□□□ -0.19
CCDC188-201ENST00000439765 GLYATL2Q8WU03 294 aa13.89□□□□□ -0.19
CCDC188-201ENST00000439765 CLCC1Q96S66 551 aa13.89□□□□□ -0.19
CCDC188-201ENST00000439765 SEC22CQ9BRL7 303 aa13.89□□□□□ -0.19
CCDC188-201ENST00000439765 SHOXO15266 292 aa13.88□□□□□ -0.19
CCDC188-201ENST00000439765 RBFOX2O43251 390 aaKnown RBP eCLIP13.88□□□□□ -0.19
CCDC188-201ENST00000439765 RAMP3O60896 148 aa13.88□□□□□ -0.19
CCDC188-201ENST00000439765 SPDEFO95238 335 aa13.88□□□□□ -0.19
CCDC188-201ENST00000439765 OPN1MWP04001 364 aa13.88□□□□□ -0.19
CCDC188-201ENST00000439765 OPN1MW2P0DN77 364 aa13.88□□□□□ -0.19
CCDC188-201ENST00000439765 OPN1MW3P0DN78 364 aa13.88□□□□□ -0.19
CCDC188-201ENST00000439765 VDAC1P21796 283 aa13.88□□□□□ -0.19
CCDC188-201ENST00000439765 UCP1P25874 307 aa13.88□□□□□ -0.19
CCDC188-201ENST00000439765 TATDN3Q17R31 274 aa13.88□□□□□ -0.19
CCDC188-201ENST00000439765 RNF5Q99942 180 aa13.88□□□□□ -0.19
CCDC188-201ENST00000439765 TMEM222Q9H0R3 208 aa13.88□□□□□ -0.19
CCDC188-201ENST00000439765 OR51J1Q9H342 316 aa13.88□□□□□ -0.19
CCDC188-201ENST00000439765 A0A0B4J293 547 aa13.87□□□□□ -0.19
CCDC188-201ENST00000439765 FCN1O00602 326 aa13.87□□□□□ -0.19
CCDC188-201ENST00000439765 CA2P00918 260 aa13.87□□□□□ -0.19
CCDC188-201ENST00000439765 IGLV2-23P01705 113 aa13.87□□□□□ -0.19
CCDC188-201ENST00000439765 Q6ZNX1 250 aa13.87□□□□□ -0.19
CCDC188-201ENST00000439765 ZNF431Q8TF32 576 aaPredicted RBP13.87□□□□□ -0.19
CCDC188-201ENST00000439765 ABHD5Q8WTS1 349 aa13.87□□□□□ -0.19
CCDC188-201ENST00000439765 CASTOR1Q8WTX7 329 aa13.87□□□□□ -0.19
CCDC188-201ENST00000439765 R3HDM4Q96D70 268 aa13.87□□□□□ -0.19
CCDC188-201ENST00000439765 GPN1Q9HCN4 374 aaPredicted RBP13.87□□□□□ -0.19
CCDC188-201ENST00000439765 TSSC4Q9Y5U2 329 aaPredicted RBP13.87□□□□□ -0.19
CCDC188-201ENST00000439765 WSB1Q9Y6I7 421 aa13.87□□□□□ -0.19
CCDC188-201ENST00000439765 C7orf66A4D0T2 115 aa13.87□□□□□ -0.19
CCDC188-201ENST00000439765 SNRPGP15A8MWD9 76 aa13.87□□□□□ -0.19
CCDC188-201ENST00000439765 G3V318 75 aa13.87□□□□□ -0.19
CCDC188-201ENST00000439765 DUS4LO95620 317 aaKnown RBP13.87□□□□□ -0.19
CCDC188-201ENST00000439765 CDS2O95674 445 aa13.87□□□□□ -0.19
CCDC188-201ENST00000439765 IGF1P05019 195 aa13.87□□□□□ -0.19
CCDC188-201ENST00000439765 SERPINE2P07093 398 aa13.87□□□□□ -0.19
CCDC188-201ENST00000439765 LPAR6P43657 344 aa13.87□□□□□ -0.19
CCDC188-201ENST00000439765 ECSCRQ19T08 205 aa13.87□□□□□ -0.19
CCDC188-201ENST00000439765 ANKRD55Q3KP44 614 aa13.87□□□□□ -0.19
CCDC188-201ENST00000439765 TMEM177Q53S58 311 aa13.87□□□□□ -0.19
CCDC188-201ENST00000439765 LCNL1Q6ZST4 164 aa13.87□□□□□ -0.19
CCDC188-201ENST00000439765 OR4S2Q8NH73 311 aa13.87□□□□□ -0.19
CCDC188-201ENST00000439765 TMEM56Q96MV1 263 aa13.87□□□□□ -0.19
CCDC188-201ENST00000439765 GON7Q9BXV9 100 aa13.87□□□□□ -0.19
CCDC188-201ENST00000439765 PRR13Q9NZ81 148 aa13.87□□□□□ -0.19
CCDC188-201ENST00000439765 FBXO7Q9Y3I1 522 aa13.87□□□□□ -0.19
CCDC188-201ENST00000439765 TMEM56-RWDD3S4R434 201 aa13.87□□□□□ -0.19
CCDC188-201ENST00000439765 HPRT1P00492 218 aa13.86□□□□□ -0.19
CCDC188-201ENST00000439765 RPA2P15927 270 aa13.86□□□□□ -0.19
CCDC188-201ENST00000439765 CX3CL1P78423 397 aa13.86□□□□□ -0.19
CCDC188-201ENST00000439765 CFHR3Q02985 330 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms