RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 FRMD6-AS1P0C7T7 363 aa7.59□□□□□ -1.19
COPB1-202ENST00000439561 RHOBP62745 196 aa7.59□□□□□ -1.19
COPB1-202ENST00000439561 IL11RAQ14626 422 aa7.59□□□□□ -1.19
COPB1-202ENST00000439561 SPATA31B1PQ5VZV4 182 aa7.59□□□□□ -1.19
COPB1-202ENST00000439561 LINC00596Q86U02 117 aa7.59□□□□□ -1.19
COPB1-202ENST00000439561 KLHDC1Q8N7A1 406 aa7.59□□□□□ -1.19
COPB1-202ENST00000439561 OR4B1Q8NGF8 309 aa7.59□□□□□ -1.19
COPB1-202ENST00000439561 LEAP2Q969E1 77 aa7.59□□□□□ -1.19
COPB1-202ENST00000439561 S1PR3Q99500 378 aa7.59□□□□□ -1.19
COPB1-202ENST00000439561 MS4A5Q9H3V2 200 aa7.59□□□□□ -1.19
COPB1-202ENST00000439561 NRN1Q9NPD7 142 aa7.59□□□□□ -1.19
COPB1-202ENST00000439561 PSPNO60542 156 aa7.59□□□□□ -1.2
COPB1-202ENST00000439561 CLDN14O95500 239 aa7.59□□□□□ -1.2
COPB1-202ENST00000439561 CA1P00915 261 aaPredicted RBP7.59□□□□□ -1.2
COPB1-202ENST00000439561 CGAP01215 116 aa7.59□□□□□ -1.2
COPB1-202ENST00000439561 DAZAP2Q15038 168 aaPredicted RBP7.59□□□□□ -1.2
COPB1-202ENST00000439561 SLC25A40Q8TBP6 338 aa7.59□□□□□ -1.2
COPB1-202ENST00000439561 ST6GALNAC6Q969X2 333 aa7.59□□□□□ -1.2
COPB1-202ENST00000439561 WDR54Q9H977 334 aa7.59□□□□□ -1.2
COPB1-202ENST00000439561 GNB4Q9HAV0 340 aa7.59□□□□□ -1.2
COPB1-202ENST00000439561 IL36BQ9NZH7 164 aa7.59□□□□□ -1.2
COPB1-202ENST00000439561 GVINP1Q7Z2Y8 2422 aa7.59□□□□□ -1.2
COPB1-202ENST00000439561 KIR2DL5BA0A0G2JN68 375 aa7.58□□□□□ -1.2
COPB1-202ENST00000439561 KIR2DL5BA0A0G2JPC4 375 aa7.58□□□□□ -1.2
COPB1-202ENST00000439561 PATE3B3GLJ2 98 aa7.58□□□□□ -1.2
COPB1-202ENST00000439561 RRHO14718 337 aa7.58□□□□□ -1.2
COPB1-202ENST00000439561 TYMSP04818 313 aa7.58□□□□□ -1.2
COPB1-202ENST00000439561 CELA3BP08861 270 aa7.58□□□□□ -1.2
COPB1-202ENST00000439561 PDLIM4P50479 330 aa7.58□□□□□ -1.2
COPB1-202ENST00000439561 B3GALT5-AS1P59052 145 aa7.58□□□□□ -1.2
COPB1-202ENST00000439561 CENPWQ5EE01 88 aa7.58□□□□□ -1.2
COPB1-202ENST00000439561 STUMQ69YW2 141 aa7.58□□□□□ -1.2
COPB1-202ENST00000439561 LCN12Q6JVE5 192 aa7.58□□□□□ -1.2
COPB1-202ENST00000439561 VHLLQ6RSH7 139 aa7.58□□□□□ -1.2
COPB1-202ENST00000439561 Q6ZSR3 168 aa7.58□□□□□ -1.2
COPB1-202ENST00000439561 Q8IYB0 196 aa7.58□□□□□ -1.2
COPB1-202ENST00000439561 KIR2DL5AQ8N109 375 aa7.58□□□□□ -1.2
COPB1-202ENST00000439561 TCTEX1D1Q8N7M0 179 aa7.58□□□□□ -1.2
COPB1-202ENST00000439561 RNF138Q8WVD3 245 aa7.58□□□□□ -1.2
COPB1-202ENST00000439561 POM121L2Q96KW2 1035 aa7.58□□□□□ -1.2
COPB1-202ENST00000439561 UQCR10Q9UDW1 63 aa7.58□□□□□ -1.2
COPB1-202ENST00000439561 OOEPA6NGQ2 149 aa7.58□□□□□ -1.2
COPB1-202ENST00000439561 KLF7O75840 302 aaPredicted RBP7.58□□□□□ -1.2
COPB1-202ENST00000439561 USF1P22415 310 aaPredicted RBP7.58□□□□□ -1.2
COPB1-202ENST00000439561 COL8A2P25067 703 aa7.58□□□□□ -1.2
COPB1-202ENST00000439561 GCHFRP30047 84 aa7.58□□□□□ -1.2
COPB1-202ENST00000439561 RPL15P61313 204 aaKnown RBP7.58□□□□□ -1.2
COPB1-202ENST00000439561 UNQ5815/PRO19632Q6UWF5 114 aa7.58□□□□□ -1.2
COPB1-202ENST00000439561 ZNF497Q6ZNH5 498 aa7.58□□□□□ -1.2
COPB1-202ENST00000439561 FAM122AQ96E09 287 aa7.58□□□□□ -1.2
COPB1-202ENST00000439561 BET1LQ9NYM9 111 aa7.58□□□□□ -1.2
COPB1-202ENST00000439561 FBXL7Q9UJT9 491 aa7.58□□□□□ -1.2
COPB1-202ENST00000439561 MED12LQ86YW9 2145 aa7.58□□□□□ -1.2
COPB1-202ENST00000439561 CADP27708 2225 aa7.57□□□□□ -1.2
COPB1-202ENST00000439561 RAB29O14966 203 aa7.57□□□□□ -1.2
COPB1-202ENST00000439561 GATA2P23769 480 aaPredicted RBP7.57□□□□□ -1.2
COPB1-202ENST00000439561 FOXL1Q12952 345 aa7.57□□□□□ -1.2
COPB1-202ENST00000439561 DCAF12Q5T6F0 453 aa7.57□□□□□ -1.2
COPB1-202ENST00000439561 SGK494Q96LW2 274 aa7.57□□□□□ -1.2
COPB1-202ENST00000439561 RNF2Q99496 336 aa7.57□□□□□ -1.2
COPB1-202ENST00000439561 LOXL2Q9Y4K0 774 aa7.57□□□□□ -1.2
COPB1-202ENST00000439561 TRBV20OR9-2A0A075B6H5 130 aa7.57□□□□□ -1.2
COPB1-202ENST00000439561 DPRXA6NFQ7 191 aa7.57□□□□□ -1.2
COPB1-202ENST00000439561 M0R2Z0 102 aa7.57□□□□□ -1.2
COPB1-202ENST00000439561 FOXH1O75593 365 aa7.57□□□□□ -1.2
COPB1-202ENST00000439561 OR9G9P0C7N8 305 aa7.57□□□□□ -1.2
COPB1-202ENST00000439561 BTF3P20290 206 aaKnown RBP7.57□□□□□ -1.2
COPB1-202ENST00000439561 OR1C1Q15619 314 aa7.57□□□□□ -1.2
COPB1-202ENST00000439561 PHF7Q9BWX1 381 aaPredicted RBP7.57□□□□□ -1.2
COPB1-202ENST00000439561 SEPSECSQ9HD40 501 aaKnown RBP7.57□□□□□ -1.2
COPB1-202ENST00000439561 SH2D2AQ9NP31 389 aa7.57□□□□□ -1.2
COPB1-202ENST00000439561 LAMTOR2Q9Y2Q5 125 aa7.57□□□□□ -1.2
COPB1-202ENST00000439561 YTHDF2Q9Y5A9 579 aaKnown RBP7.57□□□□□ -1.2
COPB1-202ENST00000439561 LRP4O75096 1905 aa7.57□□□□□ -1.2
COPB1-202ENST00000439561 COTL1Q14019 142 aa7.57□□□□□ -1.2
COPB1-202ENST00000439561 SRSF7Q16629 238 aaKnown RBP eCLIP7.57□□□□□ -1.2
COPB1-202ENST00000439561 ACSF3Q4G176 576 aaPredicted RBP7.57□□□□□ -1.2
COPB1-202ENST00000439561 RPL39P5Q59GN2 51 aa7.57□□□□□ -1.2
COPB1-202ENST00000439561 TRAT1Q6PIZ9 186 aa7.57□□□□□ -1.2
COPB1-202ENST00000439561 SPEM1Q8N4L4 309 aa7.57□□□□□ -1.2
COPB1-202ENST00000439561 STPG3Q8N7X2 389 aa7.57□□□□□ -1.2
COPB1-202ENST00000439561 DEFB108BQ8NET1 73 aa7.57□□□□□ -1.2
COPB1-202ENST00000439561 SLC24A4Q8NFF2 622 aa7.57□□□□□ -1.2
COPB1-202ENST00000439561 PKIBQ9C010 78 aa7.57□□□□□ -1.2
COPB1-202ENST00000439561 WDR83OSQ9Y284 106 aa7.57□□□□□ -1.2
COPB1-202ENST00000439561 CACNA1GO43497 2377 aa7.57□□□□□ -1.2
COPB1-202ENST00000439561 SPTBN5Q9NRC6 3674 aaKnown RBP7.57□□□□□ -1.2
COPB1-202ENST00000439561 VPS13AQ96RL7 3174 aa7.57□□□□□ -1.2
COPB1-202ENST00000439561 LINC00473A8K010 186 aa7.56□□□□□ -1.2
COPB1-202ENST00000439561 DKK1O94907 266 aa7.56□□□□□ -1.2
COPB1-202ENST00000439561 AGFG2O95081 481 aa7.56□□□□□ -1.2
COPB1-202ENST00000439561 IGLV2-14P01704 120 aa7.56□□□□□ -1.2
COPB1-202ENST00000439561 APCSP02743 223 aa7.56□□□□□ -1.2
COPB1-202ENST00000439561 CD99P14209 185 aa7.56□□□□□ -1.2
COPB1-202ENST00000439561 MFAP2P55001 183 aa7.56□□□□□ -1.2
COPB1-202ENST00000439561 TPTE2P1Q5T6R2 138 aa7.56□□□□□ -1.2
COPB1-202ENST00000439561 Q6P435 159 aa7.56□□□□□ -1.2
COPB1-202ENST00000439561 TEPPQ6URK8 271 aa7.56□□□□□ -1.2
COPB1-202ENST00000439561 C15orf62A8K5M9 175 aa7.56□□□□□ -1.2
COPB1-202ENST00000439561 IL6RP08887 468 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms