RNA–Protein interactions for RNA: ENST00000439510.2

CDC42EP4-202, Transcript of CDC42 effector protein 4, humanhuman

TSL 2 BASIC

Gene CDC42EP4, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-202ENST00000439510 LINC00205P59089 165 aa12.69□□□□□ -0.38
CDC42EP4-202ENST00000439510 C11orf53Q8IXP5 236 aa12.69□□□□□ -0.38
CDC42EP4-202ENST00000439510 HCFC1P51610 2035 aa12.69□□□□□ -0.38
CDC42EP4-202ENST00000439510 C9orf172C9J069 976 aa12.68□□□□□ -0.38
CDC42EP4-202ENST00000439510 ARL14EPLP0DKL9 152 aa12.68□□□□□ -0.38
CDC42EP4-202ENST00000439510 TIMP3P35625 211 aa12.68□□□□□ -0.38
CDC42EP4-202ENST00000439510 TMPRSS3P57727 454 aa12.68□□□□□ -0.38
CDC42EP4-202ENST00000439510 ZCCHC14Q8WYQ9 949 aaKnown RBP12.68□□□□□ -0.38
CDC42EP4-202ENST00000439510 R3HDM4Q96D70 268 aa12.68□□□□□ -0.38
CDC42EP4-202ENST00000439510 SPTBN4Q9H254 2564 aa12.68□□□□□ -0.38
CDC42EP4-202ENST00000439510 TRAV9-1A0A075B6T8 112 aa12.68□□□□□ -0.38
CDC42EP4-202ENST00000439510 PRSS46E5RG02 174 aa12.68□□□□□ -0.38
CDC42EP4-202ENST00000439510 GABRA2P47869 451 aa12.68□□□□□ -0.38
CDC42EP4-202ENST00000439510 TREML4Q6UXN2 200 aa12.68□□□□□ -0.38
CDC42EP4-202ENST00000439510 TCF23Q7RTU1 214 aa12.68□□□□□ -0.38
CDC42EP4-202ENST00000439510 ATG101Q9BSB4 218 aa12.68□□□□□ -0.38
CDC42EP4-202ENST00000439510 BOD1L1Q8NFC6 3051 aa12.68□□□□□ -0.38
CDC42EP4-202ENST00000439510 PRRC2CQ9Y520 2896 aaKnown RBP12.68□□□□□ -0.38
CDC42EP4-202ENST00000439510 CACNA1DQ01668 2161 aa12.68□□□□□ -0.38
CDC42EP4-202ENST00000439510 YPEL1O60688 119 aa12.67□□□□□ -0.38
CDC42EP4-202ENST00000439510 CXorf1O96002 111 aa12.67□□□□□ -0.38
CDC42EP4-202ENST00000439510 ESDP10768 282 aa12.67□□□□□ -0.38
CDC42EP4-202ENST00000439510 KITLGP21583 273 aa12.67□□□□□ -0.38
CDC42EP4-202ENST00000439510 SSTR5P35346 364 aa12.67□□□□□ -0.38
CDC42EP4-202ENST00000439510 TDGF1P3P51864 188 aa12.67□□□□□ -0.38
CDC42EP4-202ENST00000439510 ACP7Q6ZNF0 438 aa12.67□□□□□ -0.38
CDC42EP4-202ENST00000439510 YPEL2Q96QA6 119 aa12.67□□□□□ -0.38
CDC42EP4-202ENST00000439510 PATZ1Q9HBE1 687 aaKnown RBP12.67□□□□□ -0.38
CDC42EP4-202ENST00000439510 DMXL2Q8TDJ6 3036 aa12.67□□□□□ -0.38
CDC42EP4-202ENST00000439510 FOXF2Q12947 444 aa12.67□□□□□ -0.38
CDC42EP4-202ENST00000439510 PDLIM3Q53GG5 364 aaPredicted RBP12.67□□□□□ -0.38
CDC42EP4-202ENST00000439510 MRPL52Q86TS9 123 aaKnown RBP12.67□□□□□ -0.38
CDC42EP4-202ENST00000439510 CMTM2Q8TAZ6 248 aa12.67□□□□□ -0.38
CDC42EP4-202ENST00000439510 MGST2Q99735 147 aa12.67□□□□□ -0.38
CDC42EP4-202ENST00000439510 TP53TG3Q9ULZ0 132 aa12.67□□□□□ -0.38
CDC42EP4-202ENST00000439510 PSG11Q9UQ72 335 aa12.67□□□□□ -0.38
CDC42EP4-202ENST00000439510 TNFSF15O95150 251 aa12.67□□□□□ -0.38
CDC42EP4-202ENST00000439510 MEOX1P50221 254 aa12.67□□□□□ -0.38
CDC42EP4-202ENST00000439510 ZNF826PQ6ZT77 177 aa12.67□□□□□ -0.38
CDC42EP4-202ENST00000439510 OR13A1Q8NGR1 328 aa12.67□□□□□ -0.38
CDC42EP4-202ENST00000439510 OR52E5Q8NH55 327 aa12.67□□□□□ -0.38
CDC42EP4-202ENST00000439510 GGTLC1Q9BX51 225 aa12.67□□□□□ -0.38
CDC42EP4-202ENST00000439510 SCO2A0A1W2PP80 73 aa12.66□□□□□ -0.38
CDC42EP4-202ENST00000439510 PAFAH1B2P68402 229 aa12.66□□□□□ -0.38
CDC42EP4-202ENST00000439510 ZNF718Q3SXZ3 478 aa12.66□□□□□ -0.38
CDC42EP4-202ENST00000439510 DCAF10Q5QP82 559 aa12.66□□□□□ -0.38
CDC42EP4-202ENST00000439510 LINC00696Q6ZRV3 163 aa12.66□□□□□ -0.38
CDC42EP4-202ENST00000439510 OR10G8Q8NGN5 311 aa12.66□□□□□ -0.38
CDC42EP4-202ENST00000439510 OCC1Q8TAD7 63 aa12.66□□□□□ -0.38
CDC42EP4-202ENST00000439510 GMPPAQ96IJ6 420 aaPredicted RBP12.66□□□□□ -0.38
CDC42EP4-202ENST00000439510 TMEM106BQ9NUM4 274 aa12.66□□□□□ -0.38
CDC42EP4-202ENST00000439510 SH3BGRL2Q9UJC5 107 aa12.66□□□□□ -0.38
CDC42EP4-202ENST00000439510 DUTP33316 252 aaKnown RBP12.66□□□□□ -0.38
CDC42EP4-202ENST00000439510 MPV17P39210 176 aa12.66□□□□□ -0.38
CDC42EP4-202ENST00000439510 VDAC2P45880 294 aaPredicted RBP12.66□□□□□ -0.38
CDC42EP4-202ENST00000439510 LINC00310P59036 64 aa12.66□□□□□ -0.38
CDC42EP4-202ENST00000439510 HTD2P86397 168 aa12.66□□□□□ -0.38
CDC42EP4-202ENST00000439510 TBX15Q96SF7 602 aa12.66□□□□□ -0.38
CDC42EP4-202ENST00000439510 ZDHHC11Q9H8X9 412 aa12.66□□□□□ -0.38
CDC42EP4-202ENST00000439510 OBP2BQ9NPH6 170 aa12.66□□□□□ -0.38
CDC42EP4-202ENST00000439510 TET2Q6N021 2002 aaPredicted RBP12.65□□□□□ -0.38
CDC42EP4-202ENST00000439510 IGHV3-43A0A0B4J1X8 118 aa12.65□□□□□ -0.38
CDC42EP4-202ENST00000439510 C15orf65H3BRN8 121 aa12.65□□□□□ -0.38
CDC42EP4-202ENST00000439510 SP1P08047 785 aa12.65□□□□□ -0.38
CDC42EP4-202ENST00000439510 IGHV3-43DP0DP04 118 aa12.65□□□□□ -0.38
CDC42EP4-202ENST00000439510 HOXA4Q00056 320 aaPredicted RBP12.65□□□□□ -0.38
CDC42EP4-202ENST00000439510 CXorf67Q86X51 503 aaPredicted RBP12.65□□□□□ -0.38
CDC42EP4-202ENST00000439510 KLF14Q8TD94 323 aaPredicted RBP12.65□□□□□ -0.38
CDC42EP4-202ENST00000439510 MS4A5Q9H3V2 200 aa12.65□□□□□ -0.38
CDC42EP4-202ENST00000439510 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.65□□□□□ -0.38
CDC42EP4-202ENST00000439510 RRHO14718 337 aa12.65□□□□□ -0.38
CDC42EP4-202ENST00000439510 HPRT1P00492 218 aa12.65□□□□□ -0.38
CDC42EP4-202ENST00000439510 ADH4P08319 380 aa12.65□□□□□ -0.38
CDC42EP4-202ENST00000439510 TMEM95Q3KNT9 176 aa12.65□□□□□ -0.38
CDC42EP4-202ENST00000439510 TEX43Q6ZNM6 134 aa12.65□□□□□ -0.38
CDC42EP4-202ENST00000439510 Q6ZWC4 215 aa12.65□□□□□ -0.38
CDC42EP4-202ENST00000439510 IL36BQ9NZH7 164 aa12.65□□□□□ -0.38
CDC42EP4-202ENST00000439510 KLF13Q9Y2Y9 288 aaPredicted RBP12.65□□□□□ -0.38
CDC42EP4-202ENST00000439510 CEP295Q9C0D2 2601 aa12.65□□□□□ -0.38
CDC42EP4-202ENST00000439510 GRIFINA4D1Z8 144 aa12.64□□□□□ -0.39
CDC42EP4-202ENST00000439510 PROP1O75360 226 aa12.64□□□□□ -0.39
CDC42EP4-202ENST00000439510 TFF1P04155 84 aa12.64□□□□□ -0.39
CDC42EP4-202ENST00000439510 TPPP2P59282 170 aa12.64□□□□□ -0.39
CDC42EP4-202ENST00000439510 MIC13Q5XKP0 118 aa12.64□□□□□ -0.39
CDC42EP4-202ENST00000439510 TRAT1Q6PIZ9 186 aa12.64□□□□□ -0.39
CDC42EP4-202ENST00000439510 WDR82Q6UXN9 313 aa12.64□□□□□ -0.39
CDC42EP4-202ENST00000439510 MDS2Q8NDY4 140 aa12.64□□□□□ -0.39
CDC42EP4-202ENST00000439510 C20orf144Q9BQM9 153 aa12.64□□□□□ -0.39
CDC42EP4-202ENST00000439510 TMEM204Q9BSN7 226 aa12.64□□□□□ -0.39
CDC42EP4-202ENST00000439510 CXXC4Q9H2H0 198 aa12.64□□□□□ -0.39
CDC42EP4-202ENST00000439510 METRNQ9UJH8 293 aa12.64□□□□□ -0.39
CDC42EP4-202ENST00000439510 LSM4Q9Y4Z0 139 aaKnown RBP12.64□□□□□ -0.39
CDC42EP4-202ENST00000439510 YTHDF2Q9Y5A9 579 aaKnown RBP12.64□□□□□ -0.39
CDC42EP4-202ENST00000439510 MGAQ8IWI9 3026 aa12.64□□□□□ -0.39
CDC42EP4-202ENST00000439510 DEFB108AA8MXU0 73 aa12.64□□□□□ -0.39
CDC42EP4-202ENST00000439510 M0QZK8 103 aa12.64□□□□□ -0.39
CDC42EP4-202ENST00000439510 TPTE2P1Q5T6R2 138 aa12.64□□□□□ -0.39
CDC42EP4-202ENST00000439510 TPRX1Q8N7U7 411 aa12.64□□□□□ -0.39
CDC42EP4-202ENST00000439510 Q8TCH9 128 aa12.64□□□□□ -0.39
CDC42EP4-202ENST00000439510 C11orf52Q96A22 123 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms