RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 DCTN2Q13561 401 aaKnown RBP8.12□□□□□ -1.11
MCF2L-216ENST00000439475 FHL3Q13643 280 aa8.12□□□□□ -1.11
MCF2L-216ENST00000439475 TATDN3Q17R31 274 aa8.12□□□□□ -1.11
MCF2L-216ENST00000439475 SSX9Q7RTT3 188 aa8.12□□□□□ -1.11
MCF2L-216ENST00000439475 PUSL1Q8N0Z8 303 aaKnown RBP8.12□□□□□ -1.11
MCF2L-216ENST00000439475 DMBX1Q8NFW5 382 aa8.12□□□□□ -1.11
MCF2L-216ENST00000439475 OR51H1Q8NH63 302 aa8.12□□□□□ -1.11
MCF2L-216ENST00000439475 CASTOR1Q8WTX7 329 aa8.12□□□□□ -1.11
MCF2L-216ENST00000439475 TINAGL1Q9GZM7 467 aaPredicted RBP8.12□□□□□ -1.11
MCF2L-216ENST00000439475 PLEKHA2Q9HB19 425 aa8.12□□□□□ -1.11
MCF2L-216ENST00000439475 HRASLSQ9HDD0 168 aa8.12□□□□□ -1.11
MCF2L-216ENST00000439475 BET1LQ9NYM9 111 aa8.12□□□□□ -1.11
MCF2L-216ENST00000439475 NOTCH3Q9UM47 2321 aa8.12□□□□□ -1.11
MCF2L-216ENST00000439475 OVOL1O14753 267 aa8.11□□□□□ -1.11
MCF2L-216ENST00000439475 PGLYRP1O75594 196 aaPredicted RBP8.11□□□□□ -1.11
MCF2L-216ENST00000439475 DHFRP00374 187 aa8.11□□□□□ -1.11
MCF2L-216ENST00000439475 IGHV3-11P01762 117 aa8.11□□□□□ -1.11
MCF2L-216ENST00000439475 PRB2P02812 416 aaPredicted RBP8.11□□□□□ -1.11
MCF2L-216ENST00000439475 ZP3P21754 424 aa8.11□□□□□ -1.11
MCF2L-216ENST00000439475 F2RP25116 425 aa8.11□□□□□ -1.11
MCF2L-216ENST00000439475 HOXD3P31249 432 aaPredicted RBP8.11□□□□□ -1.11
MCF2L-216ENST00000439475 UCP3P55916 312 aa8.11□□□□□ -1.11
MCF2L-216ENST00000439475 RPL8P62917 257 aaKnown RBP8.11□□□□□ -1.11
MCF2L-216ENST00000439475 SSBP2P81877 361 aaPredicted RBP8.11□□□□□ -1.11
MCF2L-216ENST00000439475 DGCR2P98153 550 aa8.11□□□□□ -1.11
MCF2L-216ENST00000439475 EGFEM1PQ0D2K5 195 aa8.11□□□□□ -1.11
MCF2L-216ENST00000439475 SPCS2Q15005 226 aa8.11□□□□□ -1.11
MCF2L-216ENST00000439475 RNASE10Q5GAN6 216 aaKnown RBP8.11□□□□□ -1.11
MCF2L-216ENST00000439475 DEFB121Q5J5C9 76 aa8.11□□□□□ -1.11
MCF2L-216ENST00000439475 FAM209BQ5JX69 171 aa8.11□□□□□ -1.11
MCF2L-216ENST00000439475 VAX1Q5SQQ9 334 aa8.11□□□□□ -1.11
MCF2L-216ENST00000439475 VKORC1L1Q8N0U8 176 aa8.11□□□□□ -1.11
MCF2L-216ENST00000439475 TTC9CQ8N5M4 171 aa8.11□□□□□ -1.11
MCF2L-216ENST00000439475 FYTTD1Q96QD9 318 aaKnown RBP8.11□□□□□ -1.11
MCF2L-216ENST00000439475 GPHA2Q96T91 129 aa8.11□□□□□ -1.11
MCF2L-216ENST00000439475 COMMD9Q9P000 198 aa8.11□□□□□ -1.11
MCF2L-216ENST00000439475 NBEAL1Q6ZS30 2694 aa8.11□□□□□ -1.11
MCF2L-216ENST00000439475 CCDC160A6NGH7 325 aa8.1□□□□□ -1.11
MCF2L-216ENST00000439475 GABARAPH6UMI1 98 aa8.1□□□□□ -1.11
MCF2L-216ENST00000439475 CTDSP2O14595 271 aa8.1□□□□□ -1.11
MCF2L-216ENST00000439475 TBPP20226 339 aa8.1□□□□□ -1.11
MCF2L-216ENST00000439475 BRWD1-AS2P59051 145 aa8.1□□□□□ -1.11
MCF2L-216ENST00000439475 TAS2R19P59542 299 aa8.1□□□□□ -1.11
MCF2L-216ENST00000439475 SSBP1Q04837 148 aaKnown RBP8.1□□□□□ -1.11
MCF2L-216ENST00000439475 POU2AF1Q16633 256 aa8.1□□□□□ -1.11
MCF2L-216ENST00000439475 MRGPRG-AS1Q2M3A8 158 aa8.1□□□□□ -1.11
MCF2L-216ENST00000439475 ASPHD1Q5U4P2 390 aa8.1□□□□□ -1.11
MCF2L-216ENST00000439475 OR4A47Q6IF82 309 aa8.1□□□□□ -1.11
MCF2L-216ENST00000439475 ZNF429Q86V71 674 aa8.1□□□□□ -1.11
MCF2L-216ENST00000439475 SLC38A6Q8IZM9 456 aa8.1□□□□□ -1.11
MCF2L-216ENST00000439475 ARRDC1Q8N5I2 433 aa8.1□□□□□ -1.11
MCF2L-216ENST00000439475 ADAD2Q8NCV1 583 aaKnown RBP8.1□□□□□ -1.11
MCF2L-216ENST00000439475 OR52I2Q8NH67 350 aa8.1□□□□□ -1.11
MCF2L-216ENST00000439475 DCUN1D4Q92564 292 aa8.1□□□□□ -1.11
MCF2L-216ENST00000439475 DGCR14Q96DF8 476 aaKnown RBP8.1□□□□□ -1.11
MCF2L-216ENST00000439475 DIRAS2Q96HU8 199 aa8.1□□□□□ -1.11
MCF2L-216ENST00000439475 OR4C12Q96R67 309 aa8.1□□□□□ -1.11
MCF2L-216ENST00000439475 ELOVL1Q9BW60 279 aa8.1□□□□□ -1.11
MCF2L-216ENST00000439475 COMMD5Q9GZQ3 224 aa8.1□□□□□ -1.11
MCF2L-216ENST00000439475 CCDC59Q9P031 241 aaKnown RBP8.1□□□□□ -1.11
MCF2L-216ENST00000439475 PEF1Q9UBV8 284 aaKnown RBP8.1□□□□□ -1.11
MCF2L-216ENST00000439475 KLK11Q9UBX7 282 aa8.1□□□□□ -1.11
MCF2L-216ENST00000439475 MTFP1Q9UDX5 166 aa8.1□□□□□ -1.11
MCF2L-216ENST00000439475 TNCP24821 2201 aa8.1□□□□□ -1.11
MCF2L-216ENST00000439475 IGHV4OR15-8A0A075B7B6 117 aa8.09□□□□□ -1.11
MCF2L-216ENST00000439475 A0A087WW49 117 aa8.09□□□□□ -1.11
MCF2L-216ENST00000439475 FAM223BA6NKX1 122 aa8.09□□□□□ -1.11
MCF2L-216ENST00000439475 UPK2O00526 184 aa8.09□□□□□ -1.11
MCF2L-216ENST00000439475 CYB5BO43169 146 aa8.09□□□□□ -1.11
MCF2L-216ENST00000439475 SNAPC5O75971 98 aa8.09□□□□□ -1.11
MCF2L-216ENST00000439475 RLN1P04808 185 aa8.09□□□□□ -1.11
MCF2L-216ENST00000439475 APELAP0DMC3 54 aa8.09□□□□□ -1.11
MCF2L-216ENST00000439475 HLA-GP17693 338 aa8.09□□□□□ -1.11
MCF2L-216ENST00000439475 LPAR6P43657 344 aa8.09□□□□□ -1.11
MCF2L-216ENST00000439475 ATP5G2Q06055 141 aa8.09□□□□□ -1.11
MCF2L-216ENST00000439475 IL18Q14116 193 aa8.09□□□□□ -1.11
MCF2L-216ENST00000439475 RNASE12Q5GAN4 147 aaKnown RBP8.09□□□□□ -1.11
MCF2L-216ENST00000439475 THOC7Q6I9Y2 204 aaKnown RBP8.09□□□□□ -1.11
MCF2L-216ENST00000439475 FAM223AQ8IWN6 122 aa8.09□□□□□ -1.11
MCF2L-216ENST00000439475 TMEM229BQ8NBD8 167 aa8.09□□□□□ -1.11
MCF2L-216ENST00000439475 DYNC2LI1Q8TCX1 351 aa8.09□□□□□ -1.11
MCF2L-216ENST00000439475 DLX4Q92988 240 aaPredicted RBP8.09□□□□□ -1.11
MCF2L-216ENST00000439475 ABHD1Q96SE0 405 aa8.09□□□□□ -1.11
MCF2L-216ENST00000439475 RSRP1Q9BUV0 290 aa8.09□□□□□ -1.11
MCF2L-216ENST00000439475 C6orf62Q9GZU0 229 aaPredicted RBP8.09□□□□□ -1.11
MCF2L-216ENST00000439475 ALX4Q9H161 411 aaPredicted RBP8.09□□□□□ -1.11
MCF2L-216ENST00000439475 SLC2A9Q9NRM0 540 aa8.09□□□□□ -1.11
MCF2L-216ENST00000439475 FAM212BQ9NTI7 297 aaPredicted RBP8.09□□□□□ -1.11
MCF2L-216ENST00000439475 ZNF257Q9Y2Q1 563 aa8.09□□□□□ -1.11
MCF2L-216ENST00000439475 CMYA5Q8N3K9 4069 aa8.09□□□□□ -1.11
MCF2L-216ENST00000439475 ANKRD34BA5PLL1 514 aa8.08□□□□□ -1.12
MCF2L-216ENST00000439475 HMX3A6NHT5 357 aa8.08□□□□□ -1.12
MCF2L-216ENST00000439475 NPIPB5A8MRT5 1133 aa8.08□□□□□ -1.12
MCF2L-216ENST00000439475 M0QYG6 137 aa8.08□□□□□ -1.12
MCF2L-216ENST00000439475 CTDSPLO15194 276 aa8.08□□□□□ -1.12
MCF2L-216ENST00000439475 RAB3DO95716 219 aa8.08□□□□□ -1.12
MCF2L-216ENST00000439475 FGF2P09038 288 aa8.08□□□□□ -1.12
MCF2L-216ENST00000439475 ZNF735P0CB33 412 aa8.08□□□□□ -1.12
MCF2L-216ENST00000439475 DEFA4P12838 97 aa8.08□□□□□ -1.12
MCF2L-216ENST00000439475 PGAM2P15259 253 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms