RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 IGLV3-1P01715 115 aa8.34□□□□□ -1.07
CDC42SE1-202ENST00000439374 IGKV1D-39P04432 117 aa8.34□□□□□ -1.07
CDC42SE1-202ENST00000439374 SP9P0CG40 484 aa8.34□□□□□ -1.07
CDC42SE1-202ENST00000439374 COX5AP20674 150 aa8.34□□□□□ -1.07
CDC42SE1-202ENST00000439374 GPR6P46095 362 aaPredicted RBP8.34□□□□□ -1.07
CDC42SE1-202ENST00000439374 ZNF83P51522 516 aa8.34□□□□□ -1.07
CDC42SE1-202ENST00000439374 TRIP6Q15654 476 aaKnown RBP8.34□□□□□ -1.07
CDC42SE1-202ENST00000439374 ACOT6Q3I5F7 207 aaPredicted RBP8.34□□□□□ -1.07
CDC42SE1-202ENST00000439374 FAM201AQ5SY85 155 aa8.34□□□□□ -1.07
CDC42SE1-202ENST00000439374 OR2Z1Q8NG97 314 aa8.34□□□□□ -1.07
CDC42SE1-202ENST00000439374 OR5A2Q8NGI9 324 aa8.34□□□□□ -1.07
CDC42SE1-202ENST00000439374 TMEM170AQ8WVE7 144 aa8.34□□□□□ -1.07
CDC42SE1-202ENST00000439374 ZCCHC14Q8WYQ9 949 aaKnown RBP8.34□□□□□ -1.07
CDC42SE1-202ENST00000439374 POM121L2Q96KW2 1035 aa8.34□□□□□ -1.07
CDC42SE1-202ENST00000439374 RAB40CQ96S21 281 aa8.34□□□□□ -1.07
CDC42SE1-202ENST00000439374 SH2D2AQ9NP31 389 aa8.34□□□□□ -1.07
CDC42SE1-202ENST00000439374 PSG11Q9UQ72 335 aa8.34□□□□□ -1.07
CDC42SE1-202ENST00000439374 DNPH1O43598 174 aa8.34□□□□□ -1.07
CDC42SE1-202ENST00000439374 ARL14EPLP0DKL9 152 aa8.34□□□□□ -1.07
CDC42SE1-202ENST00000439374 BTF3P20290 206 aaKnown RBP8.34□□□□□ -1.07
CDC42SE1-202ENST00000439374 NPPCP23582 126 aa8.34□□□□□ -1.07
CDC42SE1-202ENST00000439374 TPPP2P59282 170 aa8.34□□□□□ -1.07
CDC42SE1-202ENST00000439374 TMEM183BQ1AE95 376 aa8.34□□□□□ -1.07
CDC42SE1-202ENST00000439374 VWA1Q6PCB0 445 aa8.34□□□□□ -1.07
CDC42SE1-202ENST00000439374 H2BFWTQ7Z2G1 175 aa8.34□□□□□ -1.07
CDC42SE1-202ENST00000439374 ABHD12Q8N2K0 398 aa8.34□□□□□ -1.07
CDC42SE1-202ENST00000439374 FDCSPQ8NFU4 85 aa8.34□□□□□ -1.07
CDC42SE1-202ENST00000439374 PRDM14Q9GZV8 571 aa8.34□□□□□ -1.07
CDC42SE1-202ENST00000439374 RNASE7Q9H1E1 156 aaKnown RBP8.34□□□□□ -1.07
CDC42SE1-202ENST00000439374 SPRR3Q9UBC9 169 aa8.34□□□□□ -1.07
CDC42SE1-202ENST00000439374 ANAPC10Q9UM13 185 aa8.34□□□□□ -1.07
CDC42SE1-202ENST00000439374 IGF2RP11717 2491 aa8.34□□□□□ -1.07
CDC42SE1-202ENST00000439374 KALRNO60229 2985 aa8.34□□□□□ -1.07
CDC42SE1-202ENST00000439374 CPAMD8Q8IZJ3 1885 aa8.34□□□□□ -1.07
CDC42SE1-202ENST00000439374 RAB29O14966 203 aa8.34□□□□□ -1.07
CDC42SE1-202ENST00000439374 SPRY3O43610 288 aa8.34□□□□□ -1.07
CDC42SE1-202ENST00000439374 APELAP0DMC3 54 aa8.34□□□□□ -1.07
CDC42SE1-202ENST00000439374 ACP1P24666 158 aa8.34□□□□□ -1.07
CDC42SE1-202ENST00000439374 UCP1P25874 307 aa8.34□□□□□ -1.07
CDC42SE1-202ENST00000439374 CEACAM8P31997 349 aaPredicted RBP8.34□□□□□ -1.07
CDC42SE1-202ENST00000439374 UCP2P55851 309 aa8.34□□□□□ -1.07
CDC42SE1-202ENST00000439374 GNB1P62873 340 aa8.34□□□□□ -1.07
CDC42SE1-202ENST00000439374 STPG4Q8N801 248 aa8.34□□□□□ -1.07
CDC42SE1-202ENST00000439374 H3BTX0 84 aa8.33□□□□□ -1.08
CDC42SE1-202ENST00000439374 OR7C2O60412 319 aa8.33□□□□□ -1.08
CDC42SE1-202ENST00000439374 PLAUP00749 431 aa8.33□□□□□ -1.08
CDC42SE1-202ENST00000439374 SFTPCP11686 197 aa8.33□□□□□ -1.08
CDC42SE1-202ENST00000439374 HOXA6P31267 233 aa8.33□□□□□ -1.08
CDC42SE1-202ENST00000439374 MPV17P39210 176 aa8.33□□□□□ -1.08
CDC42SE1-202ENST00000439374 SPATA31B1PQ5VZV4 182 aa8.33□□□□□ -1.08
CDC42SE1-202ENST00000439374 TMEM178AQ8NBL3 297 aa8.33□□□□□ -1.08
CDC42SE1-202ENST00000439374 OR4C5Q8NGB2 326 aa8.33□□□□□ -1.08
CDC42SE1-202ENST00000439374 FAM216AQ8WUB2 273 aa8.33□□□□□ -1.08
CDC42SE1-202ENST00000439374 R3HDM4Q96D70 268 aa8.33□□□□□ -1.08
CDC42SE1-202ENST00000439374 ARL2-SNX15V9GYD0 113 aa8.33□□□□□ -1.08
CDC42SE1-202ENST00000439374 MKRN2OSH3BPM6 223 aa8.33□□□□□ -1.08
CDC42SE1-202ENST00000439374 FCGR3BO75015 233 aa8.33□□□□□ -1.08
CDC42SE1-202ENST00000439374 MYOD1P15172 320 aa8.33□□□□□ -1.08
CDC42SE1-202ENST00000439374 SSTR5P35346 364 aa8.33□□□□□ -1.08
CDC42SE1-202ENST00000439374 RNASEKQ6P5S7 137 aaKnown RBP8.33□□□□□ -1.08
CDC42SE1-202ENST00000439374 SAXO1Q8IYX7 474 aa8.33□□□□□ -1.08
CDC42SE1-202ENST00000439374 OR10G8Q8NGN5 311 aa8.33□□□□□ -1.08
CDC42SE1-202ENST00000439374 ZNF391Q9UJN7 358 aa8.33□□□□□ -1.08
CDC42SE1-202ENST00000439374 RNF115Q9Y4L5 304 aa8.33□□□□□ -1.08
CDC42SE1-202ENST00000439374 TBL2Q9Y4P3 447 aaKnown RBP8.33□□□□□ -1.08
CDC42SE1-202ENST00000439374 TACC2O95359 2948 aa8.33□□□□□ -1.08
CDC42SE1-202ENST00000439374 C17orf98A8MV24 154 aa8.33□□□□□ -1.08
CDC42SE1-202ENST00000439374 CD59P13987 128 aa8.33□□□□□ -1.08
CDC42SE1-202ENST00000439374 TMEM42Q69YG0 159 aa8.33□□□□□ -1.08
CDC42SE1-202ENST00000439374 DRAM1Q8N682 238 aa8.33□□□□□ -1.08
CDC42SE1-202ENST00000439374 OR4P4Q8NGL7 312 aa8.33□□□□□ -1.08
CDC42SE1-202ENST00000439374 OCC1Q8TAD7 63 aa8.33□□□□□ -1.08
CDC42SE1-202ENST00000439374 ZNF596Q8TC21 504 aa8.33□□□□□ -1.08
CDC42SE1-202ENST00000439374 WDYHV1Q96HA8 205 aa8.33□□□□□ -1.08
CDC42SE1-202ENST00000439374 PLEKHA3Q9HB20 300 aa8.33□□□□□ -1.08
CDC42SE1-202ENST00000439374 SRIP30626 198 aa8.32□□□□□ -1.08
CDC42SE1-202ENST00000439374 RNPS1Q15287 305 aaKnown RBP8.32□□□□□ -1.08
CDC42SE1-202ENST00000439374 LRRC75BQ2VPJ9 315 aa8.32□□□□□ -1.08
CDC42SE1-202ENST00000439374 KRTCAP3Q53RY4 240 aa8.32□□□□□ -1.08
CDC42SE1-202ENST00000439374 FOXL2NBQ6ZUU3 175 aa8.32□□□□□ -1.08
CDC42SE1-202ENST00000439374 ZNF295-AS1Q8N0V1 137 aa8.32□□□□□ -1.08
CDC42SE1-202ENST00000439374 SSBP4Q9BWG4 385 aaPredicted RBP8.32□□□□□ -1.08
CDC42SE1-202ENST00000439374 TMEM106BQ9NUM4 274 aa8.32□□□□□ -1.08
CDC42SE1-202ENST00000439374 ZNF586Q9NXT0 402 aa8.32□□□□□ -1.08
CDC42SE1-202ENST00000439374 NAV3Q8IVL0 2385 aa8.32□□□□□ -1.08
CDC42SE1-202ENST00000439374 A0A1B0GWJ7 208 aa8.32□□□□□ -1.08
CDC42SE1-202ENST00000439374 M0R1B8 84 aa8.32□□□□□ -1.08
CDC42SE1-202ENST00000439374 CSN3P07498 182 aa8.32□□□□□ -1.08
CDC42SE1-202ENST00000439374 RND2P52198 227 aa8.32□□□□□ -1.08
CDC42SE1-202ENST00000439374 PSG7Q13046 419 aa8.32□□□□□ -1.08
CDC42SE1-202ENST00000439374 PRAMEF5Q5TYX0 476 aa8.32□□□□□ -1.08
CDC42SE1-202ENST00000439374 TMEM56Q96MV1 263 aa8.32□□□□□ -1.08
CDC42SE1-202ENST00000439374 ZPBPQ9BS86 351 aa8.32□□□□□ -1.08
CDC42SE1-202ENST00000439374 CTDSP1Q9GZU7 261 aa8.32□□□□□ -1.08
CDC42SE1-202ENST00000439374 TMEM56-RWDD3S4R434 201 aa8.32□□□□□ -1.08
CDC42SE1-202ENST00000439374 NCKAP5O14513 1909 aa8.32□□□□□ -1.08
CDC42SE1-202ENST00000439374 CTXND1A0A1B0GTU2 59 aa8.31□□□□□ -1.08
CDC42SE1-202ENST00000439374 SH2D7A6NKC9 451 aaPredicted RBP8.31□□□□□ -1.08
CDC42SE1-202ENST00000439374 H0Y980 276 aa8.31□□□□□ -1.08
CDC42SE1-202ENST00000439374 HAND1O96004 215 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 216.5 ms