RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 TNFSF12O43508 249 aa14.04□□□□□ -0.16
AC004540.1-201ENST00000439120 DHFRP00374 187 aa14.04□□□□□ -0.16
AC004540.1-201ENST00000439120 LYL1P12980 280 aa14.04□□□□□ -0.16
AC004540.1-201ENST00000439120 GVQW1Q8N7I0 195 aa14.04□□□□□ -0.16
AC004540.1-201ENST00000439120 TMEM167AQ8TBQ9 72 aa14.04□□□□□ -0.16
AC004540.1-201ENST00000439120 DYNLRB2Q8TF09 96 aa14.04□□□□□ -0.16
AC004540.1-201ENST00000439120 KCTD12Q96CX2 325 aaKnown RBP14.04□□□□□ -0.16
AC004540.1-201ENST00000439120 TM2D3Q9BRN9 247 aa14.04□□□□□ -0.16
AC004540.1-201ENST00000439120 C19orf73Q9NVV2 129 aa14.04□□□□□ -0.16
AC004540.1-201ENST00000439120 STAB2Q8WWQ8 2551 aa14.04□□□□□ -0.16
AC004540.1-201ENST00000439120 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.03□□□□□ -0.16
AC004540.1-201ENST00000439120 NPIPB5A8MRT5 1133 aa14.03□□□□□ -0.16
AC004540.1-201ENST00000439120 TEX22C9J3V5 150 aa14.03□□□□□ -0.16
AC004540.1-201ENST00000439120 PPYP01298 95 aa14.03□□□□□ -0.16
AC004540.1-201ENST00000439120 CBX5P45973 191 aa14.03□□□□□ -0.16
AC004540.1-201ENST00000439120 FXYD4P59646 89 aa14.03□□□□□ -0.16
AC004540.1-201ENST00000439120 EIF4EBP1Q13541 118 aaPredicted RBP14.03□□□□□ -0.16
AC004540.1-201ENST00000439120 MSMO1Q15800 293 aa14.03□□□□□ -0.16
AC004540.1-201ENST00000439120 CASC10Q5T4H9 136 aa14.03□□□□□ -0.16
AC004540.1-201ENST00000439120 HOGA1Q86XE5 327 aa14.03□□□□□ -0.16
AC004540.1-201ENST00000439120 PUSL1Q8N0Z8 303 aaKnown RBP14.03□□□□□ -0.16
AC004540.1-201ENST00000439120 OR2K2Q8NGT1 345 aa14.03□□□□□ -0.16
AC004540.1-201ENST00000439120 GPHA2Q96T91 129 aa14.03□□□□□ -0.16
AC004540.1-201ENST00000439120 SLC5A7Q9GZV3 580 aa14.03□□□□□ -0.16
AC004540.1-201ENST00000439120 HRASLSQ9HDD0 168 aa14.03□□□□□ -0.16
AC004540.1-201ENST00000439120 CCL28Q9NRJ3 127 aa14.03□□□□□ -0.16
AC004540.1-201ENST00000439120 FBXL7Q9UJT9 491 aa14.03□□□□□ -0.16
AC004540.1-201ENST00000439120 FCER2P06734 321 aa14.02□□□□□ -0.17
AC004540.1-201ENST00000439120 PTHLHP12272 177 aa14.02□□□□□ -0.17
AC004540.1-201ENST00000439120 RPL8P62917 257 aaKnown RBP14.02□□□□□ -0.17
AC004540.1-201ENST00000439120 CATR1Q13166 79 aa14.02□□□□□ -0.17
AC004540.1-201ENST00000439120 TIMM50Q3ZCQ8 353 aa14.02□□□□□ -0.17
AC004540.1-201ENST00000439120 SPAG16Q8N0X2 631 aa14.02□□□□□ -0.17
AC004540.1-201ENST00000439120 ZBTB34Q8NCN2 500 aa14.02□□□□□ -0.17
AC004540.1-201ENST00000439120 CITED4Q96RK1 184 aa14.02□□□□□ -0.17
AC004540.1-201ENST00000439120 SPATA25Q9BR10 227 aa14.02□□□□□ -0.17
AC004540.1-201ENST00000439120 AUNIPQ9H7T9 357 aa14.02□□□□□ -0.17
AC004540.1-201ENST00000439120 IFT46Q9NQC8 304 aa14.02□□□□□ -0.17
AC004540.1-201ENST00000439120 SLC2A9Q9NRM0 540 aa14.02□□□□□ -0.17
AC004540.1-201ENST00000439120 IZUMO1RA6ND01 250 aa14.01□□□□□ -0.17
AC004540.1-201ENST00000439120 PPP5D1E7EU14 171 aa14.01□□□□□ -0.17
AC004540.1-201ENST00000439120 TMEM127O75204 238 aa14.01□□□□□ -0.17
AC004540.1-201ENST00000439120 GGCTO75223 188 aaKnown RBP14.01□□□□□ -0.17
AC004540.1-201ENST00000439120 IL6RP08887 468 aaPredicted RBP14.01□□□□□ -0.17
AC004540.1-201ENST00000439120 ZNF735P0CB33 412 aa14.01□□□□□ -0.17
AC004540.1-201ENST00000439120 DEFA4P12838 97 aa14.01□□□□□ -0.17
AC004540.1-201ENST00000439120 KCTD21Q4G0X4 260 aa14.01□□□□□ -0.17
AC004540.1-201ENST00000439120 TMEM17Q86X19 198 aa14.01□□□□□ -0.17
AC004540.1-201ENST00000439120 CROCCP3Q8IVE0 287 aa14.01□□□□□ -0.17
AC004540.1-201ENST00000439120 OR4A5Q8NH83 315 aa14.01□□□□□ -0.17
AC004540.1-201ENST00000439120 ISOC1Q96CN7 298 aa14.01□□□□□ -0.17
AC004540.1-201ENST00000439120 HUWE1Q7Z6Z7 4374 aaKnown RBP14.01□□□□□ -0.17
AC004540.1-201ENST00000439120 SULT1C2O00338 296 aa14□□□□□ -0.17
AC004540.1-201ENST00000439120 HIST1H1BP16401 226 aaKnown RBP14□□□□□ -0.17
AC004540.1-201ENST00000439120 HLA-GP17693 338 aa14□□□□□ -0.17
AC004540.1-201ENST00000439120 PSMB6P28072 239 aa14□□□□□ -0.17
AC004540.1-201ENST00000439120 BRWD1-AS2P59051 145 aa14□□□□□ -0.17
AC004540.1-201ENST00000439120 CD81P60033 236 aa14□□□□□ -0.17
AC004540.1-201ENST00000439120 HERV-K104P61576 105 aa14□□□□□ -0.17
AC004540.1-201ENST00000439120 OR4A47Q6IF82 309 aa14□□□□□ -0.17
AC004540.1-201ENST00000439120 C19orf35Q6ZS72 473 aa14□□□□□ -0.17
AC004540.1-201ENST00000439120 BORCS5Q969J3 196 aa14□□□□□ -0.17
AC004540.1-201ENST00000439120 EEF1AKMT3Q96AZ1 226 aa14□□□□□ -0.17
AC004540.1-201ENST00000439120 S100A16Q96FQ6 103 aaKnown RBP14□□□□□ -0.17
AC004540.1-201ENST00000439120 SLC2A8Q9NY64 477 aa14□□□□□ -0.17
AC004540.1-201ENST00000439120 BET1LQ9NYM9 111 aa14□□□□□ -0.17
AC004540.1-201ENST00000439120 MEIS3P1A6NDR6 274 aa13.99□□□□□ -0.17
AC004540.1-201ENST00000439120 E7EUB6 86 aa13.99□□□□□ -0.17
AC004540.1-201ENST00000439120 RBFOX2O43251 390 aaKnown RBP eCLIP13.99□□□□□ -0.17
AC004540.1-201ENST00000439120 TPPPO94811 219 aa13.99□□□□□ -0.17
AC004540.1-201ENST00000439120 IGHV3-23P01764 117 aa13.99□□□□□ -0.17
AC004540.1-201ENST00000439120 HLA-AP01891 365 aaKnown RBP13.99□□□□□ -0.17
AC004540.1-201ENST00000439120 IFNA6P05013 189 aa13.99□□□□□ -0.17
AC004540.1-201ENST00000439120 AREGP15514 252 aa13.99□□□□□ -0.17
AC004540.1-201ENST00000439120 ARL3P36405 182 aa13.99□□□□□ -0.17
AC004540.1-201ENST00000439120 HAGHQ16775 308 aa13.99□□□□□ -0.17
AC004540.1-201ENST00000439120 CD300EQ496F6 205 aaPredicted RBP13.99□□□□□ -0.17
AC004540.1-201ENST00000439120 AADACL3Q5VUY0 350 aa13.99□□□□□ -0.17
AC004540.1-201ENST00000439120 LAX1Q8IWV1 398 aa13.99□□□□□ -0.17
AC004540.1-201ENST00000439120 OR5AP2Q8NGF4 316 aa13.99□□□□□ -0.17
AC004540.1-201ENST00000439120 THAP7Q9BT49 309 aaPredicted RBP13.99□□□□□ -0.17
AC004540.1-201ENST00000439120 VCX3AQ9NNX9 186 aa13.99□□□□□ -0.17
AC004540.1-201ENST00000439120 NDUFB8O95169 186 aa13.98□□□□□ -0.17
AC004540.1-201ENST00000439120 OR2C1O95371 312 aa13.98□□□□□ -0.17
AC004540.1-201ENST00000439120 HPRT1P00492 218 aa13.98□□□□□ -0.17
AC004540.1-201ENST00000439120 REG1AP05451 166 aa13.98□□□□□ -0.17
AC004540.1-201ENST00000439120 CRYGCP07315 174 aa13.98□□□□□ -0.17
AC004540.1-201ENST00000439120 NQO2P16083 231 aa13.98□□□□□ -0.17
AC004540.1-201ENST00000439120 TAS2R31P59538 309 aa13.98□□□□□ -0.17
AC004540.1-201ENST00000439120 GUCA2BQ16661 112 aa13.98□□□□□ -0.17
AC004540.1-201ENST00000439120 CLEC19AQ6UXS0 136 aa13.98□□□□□ -0.17
AC004540.1-201ENST00000439120 DMBX1Q8NFW5 382 aa13.98□□□□□ -0.17
AC004540.1-201ENST00000439120 OR51H1Q8NH63 302 aa13.98□□□□□ -0.17
AC004540.1-201ENST00000439120 CD300LFQ8TDQ1 290 aa13.98□□□□□ -0.17
AC004540.1-201ENST00000439120 GIMAP1Q8WWP7 306 aa13.98□□□□□ -0.17
AC004540.1-201ENST00000439120 COMMD5Q9GZQ3 224 aa13.98□□□□□ -0.17
AC004540.1-201ENST00000439120 PLEKHA3Q9HB20 300 aa13.98□□□□□ -0.17
AC004540.1-201ENST00000439120 EHFQ9NZC4 300 aa13.98□□□□□ -0.17
AC004540.1-201ENST00000439120 S4R3C0 116 aa13.98□□□□□ -0.17
AC004540.1-201ENST00000439120 A0A1B0GW64 132 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms