RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 PUSL1Q8N0Z8 303 aaKnown RBP19.14■□□□□ 0.65
RAPGEF1-206ENST00000438647 OR51H1Q8NH63 302 aa19.14■□□□□ 0.65
RAPGEF1-206ENST00000438647 TMEM167AQ8TBQ9 72 aa19.14■□□□□ 0.65
RAPGEF1-206ENST00000438647 TINAGL1Q9GZM7 467 aaPredicted RBP19.14■□□□□ 0.65
RAPGEF1-206ENST00000438647 RGS5O15539 181 aa19.13■□□□□ 0.65
RAPGEF1-206ENST00000438647 HPRT1P00492 218 aa19.13■□□□□ 0.65
RAPGEF1-206ENST00000438647 HSPB1P04792 205 aaKnown RBP19.13■□□□□ 0.65
RAPGEF1-206ENST00000438647 OR9G9P0C7N8 305 aa19.13■□□□□ 0.65
RAPGEF1-206ENST00000438647 TAS2R31P59538 309 aa19.13■□□□□ 0.65
RAPGEF1-206ENST00000438647 KRTAP10-11P60412 298 aa19.13■□□□□ 0.65
RAPGEF1-206ENST00000438647 TGP01266 2768 aa19.12■□□□□ 0.65
RAPGEF1-206ENST00000438647 APELAP0DMC3 54 aa19.12■□□□□ 0.65
RAPGEF1-206ENST00000438647 LPCAT3Q6P1A2 487 aa19.12■□□□□ 0.65
RAPGEF1-206ENST00000438647 SSX9Q7RTT3 188 aa19.12■□□□□ 0.65
RAPGEF1-206ENST00000438647 ADAD2Q8NCV1 583 aaKnown RBP19.12■□□□□ 0.65
RAPGEF1-206ENST00000438647 OR4A5Q8NH83 315 aa19.12■□□□□ 0.65
RAPGEF1-206ENST00000438647 USMG5Q96IX5 58 aa19.12■□□□□ 0.65
RAPGEF1-206ENST00000438647 BET1LQ9NYM9 111 aa19.12■□□□□ 0.65
RAPGEF1-206ENST00000438647 IGHV4OR15-8A0A075B7B6 117 aa19.11■□□□□ 0.65
RAPGEF1-206ENST00000438647 A0A087WW49 117 aa19.11■□□□□ 0.65
RAPGEF1-206ENST00000438647 NQO2P16083 231 aa19.11■□□□□ 0.65
RAPGEF1-206ENST00000438647 S100GP29377 79 aa19.11■□□□□ 0.65
RAPGEF1-206ENST00000438647 INSL3P51460 131 aa19.11■□□□□ 0.65
RAPGEF1-206ENST00000438647 SLC25A42Q86VD7 318 aa19.11■□□□□ 0.65
RAPGEF1-206ENST00000438647 FXYD6Q9H0Q3 95 aa19.11■□□□□ 0.65
RAPGEF1-206ENST00000438647 PLEKHA2Q9HB19 425 aa19.11■□□□□ 0.65
RAPGEF1-206ENST00000438647 CCDC59Q9P031 241 aaKnown RBP19.11■□□□□ 0.65
RAPGEF1-206ENST00000438647 GPR31O00270 319 aa19.1■□□□□ 0.65
RAPGEF1-206ENST00000438647 OVOL1O14753 267 aa19.1■□□□□ 0.65
RAPGEF1-206ENST00000438647 RLN1P04808 185 aa19.1■□□□□ 0.65
RAPGEF1-206ENST00000438647 RPL27AP46776 148 aaKnown RBP19.1■□□□□ 0.65
RAPGEF1-206ENST00000438647 RPL8P62917 257 aaKnown RBP19.1■□□□□ 0.65
RAPGEF1-206ENST00000438647 DGCR2P98153 550 aa19.1■□□□□ 0.65
RAPGEF1-206ENST00000438647 POU2AF1Q16633 256 aa19.1■□□□□ 0.65
RAPGEF1-206ENST00000438647 VAX1Q5SQQ9 334 aa19.1■□□□□ 0.65
RAPGEF1-206ENST00000438647 C10orf55Q5SWW7 151 aa19.1■□□□□ 0.65
RAPGEF1-206ENST00000438647 OR4A47Q6IF82 309 aa19.1■□□□□ 0.65
RAPGEF1-206ENST00000438647 DCUN1D4Q92564 292 aa19.1■□□□□ 0.65
RAPGEF1-206ENST00000438647 RANGRFQ9HD47 186 aaPredicted RBP19.1■□□□□ 0.65
RAPGEF1-206ENST00000438647 HRASLSQ9HDD0 168 aa19.1■□□□□ 0.65
RAPGEF1-206ENST00000438647 COMMD9Q9P000 198 aa19.1■□□□□ 0.65
RAPGEF1-206ENST00000438647 PGLYRP1O75594 196 aaPredicted RBP19.09■□□□□ 0.65
RAPGEF1-206ENST00000438647 IFNA6P05013 189 aa19.08■□□□□ 0.64
RAPGEF1-206ENST00000438647 TBPP20226 339 aa19.08■□□□□ 0.64
RAPGEF1-206ENST00000438647 F2RP25116 425 aa19.08■□□□□ 0.64
RAPGEF1-206ENST00000438647 SLURP1P55000 103 aa19.08■□□□□ 0.64
RAPGEF1-206ENST00000438647 RNASE12Q5GAN4 147 aaKnown RBP19.08■□□□□ 0.64
RAPGEF1-206ENST00000438647 TTC9CQ8N5M4 171 aa19.08■□□□□ 0.64
RAPGEF1-206ENST00000438647 OR52I2Q8NH67 350 aa19.08■□□□□ 0.64
RAPGEF1-206ENST00000438647 DYNC2LI1Q8TCX1 351 aa19.08■□□□□ 0.64
RAPGEF1-206ENST00000438647 FCAMRQ8WWV6 532 aa19.08■□□□□ 0.64
RAPGEF1-206ENST00000438647 DLX4Q92988 240 aaPredicted RBP19.08■□□□□ 0.64
RAPGEF1-206ENST00000438647 ABHD1Q96SE0 405 aa19.08■□□□□ 0.64
RAPGEF1-206ENST00000438647 MIXL1Q9H2W2 232 aa19.08■□□□□ 0.64
RAPGEF1-206ENST00000438647 KLK11Q9UBX7 282 aa19.08■□□□□ 0.64
RAPGEF1-206ENST00000438647 MTFP1Q9UDX5 166 aa19.08■□□□□ 0.64
RAPGEF1-206ENST00000438647 DPPA5A6NC42 116 aa19.07■□□□□ 0.64
RAPGEF1-206ENST00000438647 FAM223BA6NKX1 122 aa19.07■□□□□ 0.64
RAPGEF1-206ENST00000438647 HLA-GP17693 338 aa19.07■□□□□ 0.64
RAPGEF1-206ENST00000438647 ZP3P21754 424 aa19.07■□□□□ 0.64
RAPGEF1-206ENST00000438647 UCP3P55916 312 aa19.07■□□□□ 0.64
RAPGEF1-206ENST00000438647 ERVK-16P61578 105 aa19.07■□□□□ 0.64
RAPGEF1-206ENST00000438647 MRPS10P82664 201 aaKnown RBP19.07■□□□□ 0.64
RAPGEF1-206ENST00000438647 RNASE10Q5GAN6 216 aaKnown RBP19.07■□□□□ 0.64
RAPGEF1-206ENST00000438647 FAM223AQ8IWN6 122 aa19.07■□□□□ 0.64
RAPGEF1-206ENST00000438647 LAX1Q8IWV1 398 aa19.07■□□□□ 0.64
RAPGEF1-206ENST00000438647 DMBX1Q8NFW5 382 aa19.07■□□□□ 0.64
RAPGEF1-206ENST00000438647 DGCR14Q96DF8 476 aaKnown RBP19.07■□□□□ 0.64
RAPGEF1-206ENST00000438647 FYTTD1Q96QD9 318 aaKnown RBP19.07■□□□□ 0.64
RAPGEF1-206ENST00000438647 SCOCQ9UIL1 159 aa19.07■□□□□ 0.64
RAPGEF1-206ENST00000438647 ZNF257Q9Y2Q1 563 aa19.07■□□□□ 0.64
RAPGEF1-206ENST00000438647 WI2-2373I1.2A0A1W2PRP0 233 aa19.06■□□□□ 0.64
RAPGEF1-206ENST00000438647 TEX22C9J3V5 150 aa19.06■□□□□ 0.64
RAPGEF1-206ENST00000438647 K7EIL1 84 aa19.06■□□□□ 0.64
RAPGEF1-206ENST00000438647 CTDSP2O14595 271 aa19.06■□□□□ 0.64
RAPGEF1-206ENST00000438647 S1PR2O95136 353 aa19.06■□□□□ 0.64
RAPGEF1-206ENST00000438647 FGF2P09038 288 aa19.06■□□□□ 0.64
RAPGEF1-206ENST00000438647 ZNF735P0CB33 412 aa19.06■□□□□ 0.64
RAPGEF1-206ENST00000438647 DCTN2Q13561 401 aaKnown RBP19.06■□□□□ 0.64
RAPGEF1-206ENST00000438647 ZNF429Q86V71 674 aa19.06■□□□□ 0.64
RAPGEF1-206ENST00000438647 SLC38A6Q8IZM9 456 aa19.06■□□□□ 0.64
RAPGEF1-206ENST00000438647 SLC2A9Q9NRM0 540 aa19.06■□□□□ 0.64
RAPGEF1-206ENST00000438647 RABL2AQ9UBK7 228 aaPredicted RBP19.06■□□□□ 0.64
RAPGEF1-206ENST00000438647 RABL2BQ9UNT1 228 aa19.06■□□□□ 0.64
RAPGEF1-206ENST00000438647 M0QYG6 137 aa19.05■□□□□ 0.64
RAPGEF1-206ENST00000438647 IL6RP08887 468 aaPredicted RBP19.05■□□□□ 0.64
RAPGEF1-206ENST00000438647 ZNF343Q6P1L6 599 aa19.05■□□□□ 0.64
RAPGEF1-206ENST00000438647 ARRDC1Q8N5I2 433 aa19.05■□□□□ 0.64
RAPGEF1-206ENST00000438647 ISOC1Q96CN7 298 aa19.05■□□□□ 0.64
RAPGEF1-206ENST00000438647 RSRP1Q9BUV0 290 aa19.05■□□□□ 0.64
RAPGEF1-206ENST00000438647 TMEM140Q9NV12 185 aa19.05■□□□□ 0.64
RAPGEF1-206ENST00000438647 TRBV9A0A0B4J1U6 114 aa19.04■□□□□ 0.64
RAPGEF1-206ENST00000438647 HMX3A6NHT5 357 aa19.04■□□□□ 0.64
RAPGEF1-206ENST00000438647 NPIPB5A8MRT5 1133 aa19.04■□□□□ 0.64
RAPGEF1-206ENST00000438647 H3BMQ9 156 aa19.04■□□□□ 0.64
RAPGEF1-206ENST00000438647 GABARAPH6UMI1 98 aa19.04■□□□□ 0.64
RAPGEF1-206ENST00000438647 UPK2O00526 184 aa19.04■□□□□ 0.64
RAPGEF1-206ENST00000438647 DHFRP00374 187 aa19.04■□□□□ 0.64
RAPGEF1-206ENST00000438647 RHOGP84095 191 aa19.04■□□□□ 0.64
RAPGEF1-206ENST00000438647 SSBP1Q04837 148 aaKnown RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms