RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 OR4Q2P0C623 313 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 TRAPPC2P0DI81 140 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 TRAPPC2BP0DI82 140 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 SMIM17P0DL12 118 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 CXCL2P19875 107 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 BLVRBP30043 206 aaPredicted RBP2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 RPL26P61254 145 aaKnown RBP2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 RPS28P62857 69 aaKnown RBP2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 TNFAIP6P98066 277 aaPredicted RBP2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 HIST1H1AQ02539 215 aaPredicted RBP2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 IHHQ14623 411 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 EBPQ15125 230 aaKnown RBP2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 RHEBQ15382 184 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 SSX1Q16384 188 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 ZNF181Q2M3W8 571 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 FBXL19-AS1Q494R0 122 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 LINC00483Q53H64 154 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 PYY3Q5JQD4 70 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 UBE2NLQ5JXB2 153 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 COL5A1-AS1Q5SY13 56 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 LCE3AQ5TA76 89 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 SPATA31B1PQ5VZV4 182 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 FBXW12Q6X9E4 464 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 SCGB1D4Q6XE38 83 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 OOSP2Q86WS3 158 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 OR8I2Q8N0Y5 310 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 GPR26Q8NDV2 337 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 OR10G2Q8NGC3 310 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 ZNF675Q8TD23 568 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 MBD3L1Q8WWY6 194 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 ACY3Q96HD9 319 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 TRIB3Q96RU7 358 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 TIMM17AQ99595 171 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 TMEM243Q9BU79 118 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 PBDC1Q9BVG4 233 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 RNASE7Q9H1E1 156 aaKnown RBP2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 OR2D2Q9H210 308 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 OR52D1Q9H346 318 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 PARP11Q9NR21 331 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 UBQLN4Q9NRR5 601 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 UQCC1Q9NVA1 299 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 MED9Q9NWA0 146 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 MED11Q9P086 117 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 NAT8BQ9UHF3 227 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 MCTS1Q9ULC4 181 aaKnown RBP2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 HS3ST2Q9Y278 367 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 INSIG2Q9Y5U4 225 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 V9GYS6 101 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 TMEM131LA2VDJ0 1609 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 ZNF106Q9H2Y7 1883 aaKnown RBP2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 LMTK2Q8IWU2 1503 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 KIF20BQ96Q89 1820 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 CCDC88BA6NC98 1476 aa2.26□□□□□ -2.05
LSM1P1-201ENST00000438629 OVOS2A0A0G2JMS6 1433 aa2.25□□□□□ -2.05
LSM1P1-201ENST00000438629 CUL7Q14999 1698 aa2.25□□□□□ -2.05
LSM1P1-201ENST00000438629 A0A1B0GV50 99 aa2.25□□□□□ -2.05
LSM1P1-201ENST00000438629 LOC102725191A0A1B0GVB3 256 aa2.25□□□□□ -2.05
LSM1P1-201ENST00000438629 hADV38S2A0JD32 116 aa2.25□□□□□ -2.05
LSM1P1-201ENST00000438629 FABP5P3A8MUU1 101 aa2.25□□□□□ -2.05
LSM1P1-201ENST00000438629 ZNF705GA8MUZ8 300 aaPredicted RBP2.25□□□□□ -2.05
LSM1P1-201ENST00000438629 UBFD1O14562 309 aaKnown RBP2.25□□□□□ -2.05
LSM1P1-201ENST00000438629 SLC37A4O43826 429 aa2.25□□□□□ -2.05
LSM1P1-201ENST00000438629 PDCD6O75340 191 aa2.25□□□□□ -2.05
LSM1P1-201ENST00000438629 NRASP01111 189 aa2.25□□□□□ -2.05
LSM1P1-201ENST00000438629 SCGB1C2P0DMR2 95 aa2.25□□□□□ -2.05
LSM1P1-201ENST00000438629 ZNF823P16415 610 aa2.25□□□□□ -2.05
LSM1P1-201ENST00000438629 EVI2AP22794 236 aa2.25□□□□□ -2.05
LSM1P1-201ENST00000438629 S100A2P29034 98 aa2.25□□□□□ -2.05
LSM1P1-201ENST00000438629 MIPP30301 263 aa2.25□□□□□ -2.05
LSM1P1-201ENST00000438629 BRS3P32247 399 aa2.25□□□□□ -2.05
LSM1P1-201ENST00000438629 G6PCP35575 357 aa2.25□□□□□ -2.05
LSM1P1-201ENST00000438629 POLR2HP52434 150 aaKnown RBP2.25□□□□□ -2.05
LSM1P1-201ENST00000438629 RPL23P62829 140 aaKnown RBP2.25□□□□□ -2.05
LSM1P1-201ENST00000438629 RPS25P62851 125 aaKnown RBP2.25□□□□□ -2.05
LSM1P1-201ENST00000438629 GNGT1P63211 74 aa2.25□□□□□ -2.05
LSM1P1-201ENST00000438629 PNOCQ13519 176 aa2.25□□□□□ -2.05
LSM1P1-201ENST00000438629 PMAIP1Q13794 54 aa2.25□□□□□ -2.05
LSM1P1-201ENST00000438629 IAH1Q2TAA2 248 aaPredicted RBP2.25□□□□□ -2.05
LSM1P1-201ENST00000438629 C6orf99Q4VX62 202 aa2.25□□□□□ -2.05
LSM1P1-201ENST00000438629 CLLU1Q5K131 121 aa2.25□□□□□ -2.05
LSM1P1-201ENST00000438629 C6orf52Q5T4I8 152 aa2.25□□□□□ -2.05
LSM1P1-201ENST00000438629 TMEM236Q5W0B7 351 aa2.25□□□□□ -2.05
LSM1P1-201ENST00000438629 OR5A2Q8NGI9 324 aa2.25□□□□□ -2.05
LSM1P1-201ENST00000438629 OR5A1Q8NGJ0 315 aa2.25□□□□□ -2.05
LSM1P1-201ENST00000438629 OR2T4Q8NH00 348 aa2.25□□□□□ -2.05
LSM1P1-201ENST00000438629 JOSD2Q8TAC2 188 aa2.25□□□□□ -2.05
LSM1P1-201ENST00000438629 SCGB1C1Q8TD33 95 aa2.25□□□□□ -2.05
LSM1P1-201ENST00000438629 OR52B2Q96RD2 323 aa2.25□□□□□ -2.05
LSM1P1-201ENST00000438629 MGLLQ99685 303 aa2.25□□□□□ -2.05
LSM1P1-201ENST00000438629 SPIN2AQ99865 258 aa2.25□□□□□ -2.05
LSM1P1-201ENST00000438629 SPIN2BQ9BPZ2 258 aa2.25□□□□□ -2.05
LSM1P1-201ENST00000438629 ULBP3Q9BZM4 244 aa2.25□□□□□ -2.05
LSM1P1-201ENST00000438629 NKX6-2Q9C056 277 aaPredicted RBP2.25□□□□□ -2.05
LSM1P1-201ENST00000438629 TMEM222Q9H0R3 208 aa2.25□□□□□ -2.05
LSM1P1-201ENST00000438629 OR51I2Q9H344 312 aa2.25□□□□□ -2.05
LSM1P1-201ENST00000438629 Q9H521 79 aa2.25□□□□□ -2.05
LSM1P1-201ENST00000438629 RNF122Q9H9V4 155 aa2.25□□□□□ -2.05
LSM1P1-201ENST00000438629 HES4Q9HCC6 221 aa2.25□□□□□ -2.05
LSM1P1-201ENST00000438629 MRPL27Q9P0M9 148 aaKnown RBP2.25□□□□□ -2.05
LSM1P1-201ENST00000438629 SLC23A2Q9UGH3 650 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms