RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 TMEM204Q9BSN7 226 aa7.85□□□□□ -1.15
CUX1-206ENST00000437600 QTRT1Q9BXR0 403 aaKnown RBP7.85□□□□□ -1.15
CUX1-206ENST00000437600 KMT2BQ9UMN6 2715 aaPredicted RBP7.85□□□□□ -1.15
CUX1-206ENST00000437600 TGIF2-C20orf24A0A0A6YYL0 155 aa7.84□□□□□ -1.15
CUX1-206ENST00000437600 SMCO3A2RU48 225 aa7.84□□□□□ -1.15
CUX1-206ENST00000437600 M0R1X1 148 aa7.84□□□□□ -1.15
CUX1-206ENST00000437600 MMP23AO75900 390 aa7.84□□□□□ -1.15
CUX1-206ENST00000437600 HIST1H1BP16401 226 aaKnown RBP7.84□□□□□ -1.15
CUX1-206ENST00000437600 KLF3P57682 345 aaPredicted RBP7.84□□□□□ -1.15
CUX1-206ENST00000437600 USF2Q15853 346 aaPredicted RBP7.84□□□□□ -1.15
CUX1-206ENST00000437600 SMIM21Q3B7S5 101 aa7.84□□□□□ -1.15
CUX1-206ENST00000437600 C4orf17Q53FE4 359 aa7.84□□□□□ -1.15
CUX1-206ENST00000437600 LSM10Q969L4 123 aaKnown RBP7.84□□□□□ -1.15
CUX1-206ENST00000437600 BBC3Q96PG8 261 aaPredicted RBP7.84□□□□□ -1.15
CUX1-206ENST00000437600 HINT2Q9BX68 163 aa7.84□□□□□ -1.15
CUX1-206ENST00000437600 DOK5Q9P104 306 aa7.84□□□□□ -1.15
CUX1-206ENST00000437600 DUXBA0A1W2PPF3 345 aa7.84□□□□□ -1.15
CUX1-206ENST00000437600 CLDN14O95500 239 aa7.84□□□□□ -1.15
CUX1-206ENST00000437600 CXCL1P09341 107 aa7.84□□□□□ -1.15
CUX1-206ENST00000437600 KITLGP21583 273 aa7.84□□□□□ -1.15
CUX1-206ENST00000437600 CD40P25942 277 aa7.84□□□□□ -1.15
CUX1-206ENST00000437600 SLC35E4Q6ICL7 350 aa7.84□□□□□ -1.15
CUX1-206ENST00000437600 ACSM6Q6P461 480 aa7.84□□□□□ -1.15
CUX1-206ENST00000437600 MALSU1Q96EH3 234 aa7.84□□□□□ -1.15
CUX1-206ENST00000437600 SDSLQ96GA7 329 aa7.84□□□□□ -1.15
CUX1-206ENST00000437600 CCL13Q99616 98 aa7.84□□□□□ -1.15
CUX1-206ENST00000437600 C2orf88Q9BSF0 95 aa7.84□□□□□ -1.15
CUX1-206ENST00000437600 WDR61Q9GZS3 305 aaKnown RBP7.84□□□□□ -1.15
CUX1-206ENST00000437600 KIAA1456Q9P272 454 aa7.84□□□□□ -1.15
CUX1-206ENST00000437600 HELZ2Q9BYK8 2649 aaKnown RBP7.84□□□□□ -1.15
CUX1-206ENST00000437600 ZNF737O75373 536 aa7.84□□□□□ -1.16
CUX1-206ENST00000437600 DFFBO76075 338 aa7.84□□□□□ -1.16
CUX1-206ENST00000437600 GPR12P47775 334 aa7.84□□□□□ -1.16
CUX1-206ENST00000437600 LRRC75BQ2VPJ9 315 aa7.84□□□□□ -1.16
CUX1-206ENST00000437600 GFI1BQ5VTD9 330 aa7.84□□□□□ -1.16
CUX1-206ENST00000437600 MOB1BQ7L9L4 216 aa7.84□□□□□ -1.16
CUX1-206ENST00000437600 TAF15Q92804 592 aaKnown RBP eCLIP7.84□□□□□ -1.16
CUX1-206ENST00000437600 LHX4Q969G2 390 aa7.84□□□□□ -1.16
CUX1-206ENST00000437600 MISP3Q96FF7 219 aa7.84□□□□□ -1.16
CUX1-206ENST00000437600 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.84□□□□□ -1.16
CUX1-206ENST00000437600 SLC39A9Q9NUM3 307 aa7.84□□□□□ -1.16
CUX1-206ENST00000437600 NPIPB11E5RHQ5 1161 aa7.83□□□□□ -1.16
CUX1-206ENST00000437600 TSTD3H0UI37 97 aa7.83□□□□□ -1.16
CUX1-206ENST00000437600 C16orf97H3BN30 126 aa7.83□□□□□ -1.16
CUX1-206ENST00000437600 C15orf65H3BRN8 121 aa7.83□□□□□ -1.16
CUX1-206ENST00000437600 SPINT2O43291 252 aa7.83□□□□□ -1.16
CUX1-206ENST00000437600 GYPAP02724 150 aa7.83□□□□□ -1.16
CUX1-206ENST00000437600 GRNP28799 593 aaKnown RBP7.83□□□□□ -1.16
CUX1-206ENST00000437600 BSPH1Q075Z2 132 aa7.83□□□□□ -1.16
CUX1-206ENST00000437600 MORN2Q502X0 79 aa7.83□□□□□ -1.16
CUX1-206ENST00000437600 MBNL2Q5VZF2 373 aaKnown RBP7.83□□□□□ -1.16
CUX1-206ENST00000437600 SPNS3Q6ZMD2 512 aa7.83□□□□□ -1.16
CUX1-206ENST00000437600 NECAP1Q8NC96 275 aa7.83□□□□□ -1.16
CUX1-206ENST00000437600 PRR7Q8TB68 274 aa7.83□□□□□ -1.16
CUX1-206ENST00000437600 NEUROG1Q92886 237 aa7.83□□□□□ -1.16
CUX1-206ENST00000437600 HBG1P69891 147 aa7.83□□□□□ -1.16
CUX1-206ENST00000437600 HBG2P69892 147 aa7.83□□□□□ -1.16
CUX1-206ENST00000437600 HEPN1Q6WQI6 88 aa7.83□□□□□ -1.16
CUX1-206ENST00000437600 FAM216BQ8N7L0 139 aa7.83□□□□□ -1.16
CUX1-206ENST00000437600 Q8TCH9 128 aa7.83□□□□□ -1.16
CUX1-206ENST00000437600 RPUSD4Q96CM3 377 aaKnown RBP7.83□□□□□ -1.16
CUX1-206ENST00000437600 PATZ1Q9HBE1 687 aaKnown RBP7.83□□□□□ -1.16
CUX1-206ENST00000437600 CELSR1Q9NYQ6 3014 aa7.83□□□□□ -1.16
CUX1-206ENST00000437600 TRAV38-1A0A0B4J264 116 aa7.82□□□□□ -1.16
CUX1-206ENST00000437600 DPRXA6NFQ7 191 aa7.82□□□□□ -1.16
CUX1-206ENST00000437600 FAM90A27PA6NNH2 459 aa7.82□□□□□ -1.16
CUX1-206ENST00000437600 RRHO14718 337 aa7.82□□□□□ -1.16
CUX1-206ENST00000437600 FGF7P21781 194 aa7.82□□□□□ -1.16
CUX1-206ENST00000437600 GLRXP35754 106 aa7.82□□□□□ -1.16
CUX1-206ENST00000437600 CD200P41217 278 aa7.82□□□□□ -1.16
CUX1-206ENST00000437600 DLX1P56177 255 aa7.82□□□□□ -1.16
CUX1-206ENST00000437600 NKX6-1P78426 367 aaPredicted RBP7.82□□□□□ -1.16
CUX1-206ENST00000437600 RHEBQ15382 184 aa7.82□□□□□ -1.16
CUX1-206ENST00000437600 COMMD1Q8N668 190 aa7.82□□□□□ -1.16
CUX1-206ENST00000437600 Q8WTZ3 238 aa7.82□□□□□ -1.16
CUX1-206ENST00000437600 R3HDM4Q96D70 268 aa7.82□□□□□ -1.16
CUX1-206ENST00000437600 NIPSNAP3BQ9BS92 247 aa7.82□□□□□ -1.16
CUX1-206ENST00000437600 UBR5O95071 2799 aaPredicted RBP7.82□□□□□ -1.16
CUX1-206ENST00000437600 ZFHX3Q15911 3703 aa7.82□□□□□ -1.16
CUX1-206ENST00000437600 WNK2Q9Y3S1 2297 aa7.82□□□□□ -1.16
CUX1-206ENST00000437600 MAP1LC3B2A6NCE7 125 aa7.82□□□□□ -1.16
CUX1-206ENST00000437600 CCL21O00585 134 aa7.82□□□□□ -1.16
CUX1-206ENST00000437600 IFNA10P01566 189 aa7.82□□□□□ -1.16
CUX1-206ENST00000437600 BMI1P35226 326 aa7.82□□□□□ -1.16
CUX1-206ENST00000437600 UBE2G2P60604 165 aa7.82□□□□□ -1.16
CUX1-206ENST00000437600 PKIAP61925 76 aa7.82□□□□□ -1.16
CUX1-206ENST00000437600 CATR1Q13166 79 aa7.82□□□□□ -1.16
CUX1-206ENST00000437600 LFNGQ8NES3 379 aa7.82□□□□□ -1.16
CUX1-206ENST00000437600 OR10P1Q8NGE3 313 aa7.82□□□□□ -1.16
CUX1-206ENST00000437600 RND1Q92730 232 aa7.82□□□□□ -1.16
CUX1-206ENST00000437600 MAP1LC3BQ9GZQ8 125 aa7.82□□□□□ -1.16
CUX1-206ENST00000437600 MALRD1Q5VYJ5 2156 aa7.82□□□□□ -1.16
CUX1-206ENST00000437600 TANC2Q9HCD6 1990 aa7.81□□□□□ -1.16
CUX1-206ENST00000437600 SRRM5B3KS81 715 aa7.81□□□□□ -1.16
CUX1-206ENST00000437600 PPP1R2P9O14990 202 aa7.81□□□□□ -1.16
CUX1-206ENST00000437600 CYB5BO43169 146 aa7.81□□□□□ -1.16
CUX1-206ENST00000437600 THBDP07204 575 aa7.81□□□□□ -1.16
CUX1-206ENST00000437600 FABP4P15090 132 aa7.81□□□□□ -1.16
CUX1-206ENST00000437600 DUTP33316 252 aaKnown RBP7.81□□□□□ -1.16
CUX1-206ENST00000437600 FAM90A1Q86YD7 464 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms