RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 FAM110AQ9BQ89 295 aa5.89□□□□□ -1.47
VPS50-203ENST00000436177 SRD5A3Q9H8P0 318 aa5.89□□□□□ -1.47
VPS50-203ENST00000436177 NDUFB11Q9NX14 153 aa5.89□□□□□ -1.47
VPS50-203ENST00000436177 TECRQ9NZ01 308 aaKnown RBP5.89□□□□□ -1.47
VPS50-203ENST00000436177 FBXL7Q9UJT9 491 aa5.89□□□□□ -1.47
VPS50-203ENST00000436177 ADAM30Q9UKF2 790 aa5.89□□□□□ -1.47
VPS50-203ENST00000436177 OR2W1Q9Y3N9 320 aa5.89□□□□□ -1.47
VPS50-203ENST00000436177 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.88□□□□□ -1.47
VPS50-203ENST00000436177 ZNF320A2RRD8 509 aa5.88□□□□□ -1.47
VPS50-203ENST00000436177 IZUMO1RA6ND01 250 aa5.88□□□□□ -1.47
VPS50-203ENST00000436177 LINC00473A8K010 186 aa5.88□□□□□ -1.47
VPS50-203ENST00000436177 RAB27BO00194 218 aa5.88□□□□□ -1.47
VPS50-203ENST00000436177 CYB5BO43169 146 aa5.88□□□□□ -1.47
VPS50-203ENST00000436177 HRASP01112 189 aa5.88□□□□□ -1.47
VPS50-203ENST00000436177 FOLR2P14207 255 aa5.88□□□□□ -1.47
VPS50-203ENST00000436177 NFYAP23511 347 aaPredicted RBP5.88□□□□□ -1.47
VPS50-203ENST00000436177 ARL3P36405 182 aa5.88□□□□□ -1.47
VPS50-203ENST00000436177 KIR2DS2P43631 304 aa5.88□□□□□ -1.47
VPS50-203ENST00000436177 ARPC4P59998 168 aa5.88□□□□□ -1.47
VPS50-203ENST00000436177 PLA2G7Q13093 441 aa5.88□□□□□ -1.47
VPS50-203ENST00000436177 ANKRD55Q3KP44 614 aa5.88□□□□□ -1.47
VPS50-203ENST00000436177 CDNFQ49AH0 187 aa5.88□□□□□ -1.47
VPS50-203ENST00000436177 FAM106AQ4KMX7 169 aa5.88□□□□□ -1.47
VPS50-203ENST00000436177 C10orf55Q5SWW7 151 aa5.88□□□□□ -1.47
VPS50-203ENST00000436177 C22orf42Q6IC83 251 aa5.88□□□□□ -1.47
VPS50-203ENST00000436177 OR4A47Q6IF82 309 aa5.88□□□□□ -1.47
VPS50-203ENST00000436177 IZUMO2Q6UXV1 221 aa5.88□□□□□ -1.47
VPS50-203ENST00000436177 Q6ZS49 121 aa5.88□□□□□ -1.47
VPS50-203ENST00000436177 DDB2Q92466 427 aa5.88□□□□□ -1.47
VPS50-203ENST00000436177 C5orf30Q96GV9 206 aa5.88□□□□□ -1.47
VPS50-203ENST00000436177 CNBD2Q96M20 576 aa5.88□□□□□ -1.47
VPS50-203ENST00000436177 OR2A7Q96R45 310 aa5.88□□□□□ -1.47
VPS50-203ENST00000436177 AIFM2Q9BRQ8 373 aa5.88□□□□□ -1.47
VPS50-203ENST00000436177 OR51E2Q9H255 320 aa5.88□□□□□ -1.47
VPS50-203ENST00000436177 DCSTAMPQ9H295 470 aa5.88□□□□□ -1.47
VPS50-203ENST00000436177 RETNQ9HD89 108 aa5.88□□□□□ -1.47
VPS50-203ENST00000436177 TAS2R8Q9NYW2 309 aa5.88□□□□□ -1.47
VPS50-203ENST00000436177 SPATA2Q9UM82 520 aa5.88□□□□□ -1.47
VPS50-203ENST00000436177 RBMX2Q9Y388 322 aaKnown RBP5.88□□□□□ -1.47
VPS50-203ENST00000436177 DYNC2H1Q8NCM8 4307 aaKnown RBP5.87□□□□□ -1.47
VPS50-203ENST00000436177 HUWE1Q7Z6Z7 4374 aaKnown RBP5.87□□□□□ -1.47
VPS50-203ENST00000436177 TRBV9A0A0B4J1U6 114 aa5.87□□□□□ -1.47
VPS50-203ENST00000436177 TRDV1A0A1B0GX56 115 aa5.87□□□□□ -1.47
VPS50-203ENST00000436177 SMIM30A4D0T7 59 aa5.87□□□□□ -1.47
VPS50-203ENST00000436177 C2orf70A6NJV1 201 aa5.87□□□□□ -1.47
VPS50-203ENST00000436177 NPIPB5A8MRT5 1133 aa5.87□□□□□ -1.47
VPS50-203ENST00000436177 OR11H12B2RN74 326 aa5.87□□□□□ -1.47
VPS50-203ENST00000436177 ANKRD65E5RJM6 399 aa5.87□□□□□ -1.47
VPS50-203ENST00000436177 PPP5D1E7EU14 171 aa5.87□□□□□ -1.47
VPS50-203ENST00000436177 KBTBD11O94819 623 aa5.87□□□□□ -1.47
VPS50-203ENST00000436177 HLA-AP01891 365 aaKnown RBP5.87□□□□□ -1.47
VPS50-203ENST00000436177 HIST1H1BP16401 226 aaKnown RBP5.87□□□□□ -1.47
VPS50-203ENST00000436177 PSMB9P28065 219 aa5.87□□□□□ -1.47
VPS50-203ENST00000436177 MAS1LP35410 378 aa5.87□□□□□ -1.47
VPS50-203ENST00000436177 RPL8P62917 257 aaKnown RBP5.87□□□□□ -1.47
VPS50-203ENST00000436177 ZNF45Q02386 682 aa5.87□□□□□ -1.47
VPS50-203ENST00000436177 HACD4Q5VWC8 232 aa5.87□□□□□ -1.47
VPS50-203ENST00000436177 SSX9Q7RTT3 188 aa5.87□□□□□ -1.47
VPS50-203ENST00000436177 VKORC1L1Q8N0U8 176 aa5.87□□□□□ -1.47
VPS50-203ENST00000436177 TTC9CQ8N5M4 171 aa5.87□□□□□ -1.47
VPS50-203ENST00000436177 DEFB125Q8N687 156 aa5.87□□□□□ -1.47
VPS50-203ENST00000436177 OR52B4Q8NGK2 314 aa5.87□□□□□ -1.47
VPS50-203ENST00000436177 NUDCD2Q8WVJ2 157 aa5.87□□□□□ -1.47
VPS50-203ENST00000436177 EEF1AKMT3Q96AZ1 226 aa5.87□□□□□ -1.47
VPS50-203ENST00000436177 THAP7Q9BT49 309 aaPredicted RBP5.87□□□□□ -1.47
VPS50-203ENST00000436177 KRTAP4-2Q9BYR5 136 aa5.87□□□□□ -1.47
VPS50-203ENST00000436177 HIPK2Q9H2X6 1198 aa5.87□□□□□ -1.47
VPS50-203ENST00000436177 HRASLSQ9HDD0 168 aa5.87□□□□□ -1.47
VPS50-203ENST00000436177 NKX1-2Q9UD57 310 aaPredicted RBP5.87□□□□□ -1.47
VPS50-203ENST00000436177 BIRC6Q9NR09 4857 aa5.86□□□□□ -1.47
VPS50-203ENST00000436177 TMEM235A6NFC5 223 aa5.86□□□□□ -1.47
VPS50-203ENST00000436177 HMX3A6NHT5 357 aa5.86□□□□□ -1.47
VPS50-203ENST00000436177 NOTOA8MTQ0 251 aa5.86□□□□□ -1.47
VPS50-203ENST00000436177 LGALS9O00182 355 aa5.86□□□□□ -1.47
VPS50-203ENST00000436177 EIF4EBP3O60516 100 aaPredicted RBP5.86□□□□□ -1.47
VPS50-203ENST00000436177 RBMXL2O75526 392 aaKnown RBP5.86□□□□□ -1.47
VPS50-203ENST00000436177 OR2C1O95371 312 aa5.86□□□□□ -1.47
VPS50-203ENST00000436177 HLA-DQB1P01920 261 aa5.86□□□□□ -1.47
VPS50-203ENST00000436177 CD7P09564 240 aa5.86□□□□□ -1.47
VPS50-203ENST00000436177 GALP22466 123 aa5.86□□□□□ -1.47
VPS50-203ENST00000436177 CATR1Q13166 79 aa5.86□□□□□ -1.47
VPS50-203ENST00000436177 DEFB114Q30KQ6 69 aa5.86□□□□□ -1.47
VPS50-203ENST00000436177 ZNF57Q68EA5 555 aaPredicted RBP5.86□□□□□ -1.47
VPS50-203ENST00000436177 CNIH2Q6PI25 160 aa5.86□□□□□ -1.47
VPS50-203ENST00000436177 CLEC19AQ6UXS0 136 aa5.86□□□□□ -1.47
VPS50-203ENST00000436177 ZNF66Q6ZN08 573 aa5.86□□□□□ -1.47
VPS50-203ENST00000436177 RBPMS2Q6ZRY4 209 aaKnown RBP5.86□□□□□ -1.47
VPS50-203ENST00000436177 TMEM167AQ8TBQ9 72 aa5.86□□□□□ -1.47
VPS50-203ENST00000436177 SECTM1Q8WVN6 248 aa5.86□□□□□ -1.47
VPS50-203ENST00000436177 WDR89Q96FK6 387 aaPredicted RBP5.86□□□□□ -1.47
VPS50-203ENST00000436177 CXorf58Q96LI9 332 aa5.86□□□□□ -1.47
VPS50-203ENST00000436177 GGTLC1Q9BX51 225 aa5.86□□□□□ -1.47
VPS50-203ENST00000436177 COMMD5Q9GZQ3 224 aa5.86□□□□□ -1.47
VPS50-203ENST00000436177 SLC2A9Q9NRM0 540 aa5.86□□□□□ -1.47
VPS50-203ENST00000436177 DAPK2Q9UIK4 370 aa5.86□□□□□ -1.47
VPS50-203ENST00000436177 ANXA10Q9UJ72 324 aa5.86□□□□□ -1.47
VPS50-203ENST00000436177 U3KQE9 123 aa5.86□□□□□ -1.47
VPS50-203ENST00000436177 DNAH7Q8WXX0 4024 aa5.85□□□□□ -1.47
VPS50-203ENST00000436177 IGKV1D-8A0A087WSZ0 117 aa5.85□□□□□ -1.47
VPS50-203ENST00000436177 TRBV7-1A0A0A6YYK4 115 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 307.3 ms