RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 S100GP29377 79 aa12.61□□□□□ -0.39
SMPD4-207ENST00000435455 MAS1LP35410 378 aa12.61□□□□□ -0.39
SMPD4-207ENST00000435455 MRPS10P82664 201 aaKnown RBP12.61□□□□□ -0.39
SMPD4-207ENST00000435455 RNASE12Q5GAN4 147 aaKnown RBP12.61□□□□□ -0.39
SMPD4-207ENST00000435455 VAX1Q5SQQ9 334 aa12.61□□□□□ -0.39
SMPD4-207ENST00000435455 FCAMRQ8WWV6 532 aa12.61□□□□□ -0.39
SMPD4-207ENST00000435455 ABHD1Q96SE0 405 aa12.61□□□□□ -0.39
SMPD4-207ENST00000435455 RABL2AQ9UBK7 228 aaPredicted RBP12.61□□□□□ -0.39
SMPD4-207ENST00000435455 KLK11Q9UBX7 282 aa12.61□□□□□ -0.39
SMPD4-207ENST00000435455 MTFP1Q9UDX5 166 aa12.61□□□□□ -0.39
SMPD4-207ENST00000435455 RABL2BQ9UNT1 228 aa12.61□□□□□ -0.39
SMPD4-207ENST00000435455 A0A0G2JLM5 398 aa12.6□□□□□ -0.39
SMPD4-207ENST00000435455 HPRT1P00492 218 aa12.6□□□□□ -0.39
SMPD4-207ENST00000435455 IFNA6P05013 189 aa12.6□□□□□ -0.39
SMPD4-207ENST00000435455 TAS2R31P59538 309 aa12.6□□□□□ -0.39
SMPD4-207ENST00000435455 RNASE10Q5GAN6 216 aaKnown RBP12.6□□□□□ -0.39
SMPD4-207ENST00000435455 ASPHD1Q5U4P2 390 aa12.6□□□□□ -0.39
SMPD4-207ENST00000435455 OR4A5Q8NH83 315 aa12.6□□□□□ -0.39
SMPD4-207ENST00000435455 TINAGL1Q9GZM7 467 aaPredicted RBP12.6□□□□□ -0.39
SMPD4-207ENST00000435455 PLEKHA2Q9HB19 425 aa12.6□□□□□ -0.39
SMPD4-207ENST00000435455 COA4Q9NYJ1 87 aa12.6□□□□□ -0.39
SMPD4-207ENST00000435455 BET1LQ9NYM9 111 aa12.6□□□□□ -0.39
SMPD4-207ENST00000435455 DNAH3Q8TD57 4116 aa12.6□□□□□ -0.39
SMPD4-207ENST00000435455 C13orf42A0A1B0GVH6 325 aa12.59□□□□□ -0.39
SMPD4-207ENST00000435455 LINC01619G3V211 115 aa12.59□□□□□ -0.39
SMPD4-207ENST00000435455 GABARAPH6UMI1 98 aa12.59□□□□□ -0.39
SMPD4-207ENST00000435455 M0QYG6 137 aa12.59□□□□□ -0.39
SMPD4-207ENST00000435455 PGLYRP1O75594 196 aaPredicted RBP12.59□□□□□ -0.39
SMPD4-207ENST00000435455 RLN1P04808 185 aa12.59□□□□□ -0.39
SMPD4-207ENST00000435455 OR9G9P0C7N8 305 aa12.59□□□□□ -0.39
SMPD4-207ENST00000435455 NQO2P16083 231 aa12.59□□□□□ -0.39
SMPD4-207ENST00000435455 F2RP25116 425 aa12.59□□□□□ -0.39
SMPD4-207ENST00000435455 RPL27AP46776 148 aaKnown RBP12.59□□□□□ -0.39
SMPD4-207ENST00000435455 UCP3P55916 312 aa12.59□□□□□ -0.39
SMPD4-207ENST00000435455 SSBP1Q04837 148 aaKnown RBP12.59□□□□□ -0.39
SMPD4-207ENST00000435455 POU2AF1Q16633 256 aa12.59□□□□□ -0.39
SMPD4-207ENST00000435455 SSX9Q7RTT3 188 aa12.59□□□□□ -0.39
SMPD4-207ENST00000435455 SLC25A42Q86VD7 318 aa12.59□□□□□ -0.39
SMPD4-207ENST00000435455 DIRAS2Q96HU8 199 aa12.59□□□□□ -0.39
SMPD4-207ENST00000435455 COMMD9Q9P000 198 aa12.59□□□□□ -0.39
SMPD4-207ENST00000435455 ZMAT5Q9UDW3 170 aaKnown RBP12.59□□□□□ -0.39
SMPD4-207ENST00000435455 IGHV3-11P01762 117 aa12.58□□□□□ -0.4
SMPD4-207ENST00000435455 PRB2P02812 416 aaPredicted RBP12.58□□□□□ -0.4
SMPD4-207ENST00000435455 CD3DP04234 171 aa12.58□□□□□ -0.4
SMPD4-207ENST00000435455 APELAP0DMC3 54 aa12.58□□□□□ -0.4
SMPD4-207ENST00000435455 RPL8P62917 257 aaKnown RBP12.58□□□□□ -0.4
SMPD4-207ENST00000435455 EGFEM1PQ0D2K5 195 aa12.58□□□□□ -0.4
SMPD4-207ENST00000435455 C9orf66Q5T8R8 295 aa12.58□□□□□ -0.4
SMPD4-207ENST00000435455 OR4A47Q6IF82 309 aa12.58□□□□□ -0.4
SMPD4-207ENST00000435455 ARRDC1Q8N5I2 433 aa12.58□□□□□ -0.4
SMPD4-207ENST00000435455 ADAD2Q8NCV1 583 aaKnown RBP12.58□□□□□ -0.4
SMPD4-207ENST00000435455 DGCR14Q96DF8 476 aaKnown RBP12.58□□□□□ -0.4
SMPD4-207ENST00000435455 RSRP1Q9BUV0 290 aa12.58□□□□□ -0.4
SMPD4-207ENST00000435455 C6orf62Q9GZU0 229 aaPredicted RBP12.58□□□□□ -0.4
SMPD4-207ENST00000435455 ALX4Q9H161 411 aaPredicted RBP12.58□□□□□ -0.4
SMPD4-207ENST00000435455 HRASLSQ9HDD0 168 aa12.58□□□□□ -0.4
SMPD4-207ENST00000435455 AURKAIP1Q9NWT8 199 aaPredicted RBP12.58□□□□□ -0.4
SMPD4-207ENST00000435455 CEPT1Q9Y6K0 416 aa12.58□□□□□ -0.4
SMPD4-207ENST00000435455 PRKDCP78527 4128 aaKnown RBP12.57□□□□□ -0.4
SMPD4-207ENST00000435455 CCDC160A6NGH7 325 aa12.57□□□□□ -0.4
SMPD4-207ENST00000435455 S1PR2O95136 353 aa12.57□□□□□ -0.4
SMPD4-207ENST00000435455 HSPB1P04792 205 aaKnown RBP12.57□□□□□ -0.4
SMPD4-207ENST00000435455 FGF2P09038 288 aa12.57□□□□□ -0.4
SMPD4-207ENST00000435455 TAS2R19P59542 299 aa12.57□□□□□ -0.4
SMPD4-207ENST00000435455 ERVK-16P61578 105 aa12.57□□□□□ -0.4
SMPD4-207ENST00000435455 DGCR2P98153 550 aa12.57□□□□□ -0.4
SMPD4-207ENST00000435455 C10orf55Q5SWW7 151 aa12.57□□□□□ -0.4
SMPD4-207ENST00000435455 SLC38A6Q8IZM9 456 aa12.57□□□□□ -0.4
SMPD4-207ENST00000435455 TMEM229BQ8NBD8 167 aa12.57□□□□□ -0.4
SMPD4-207ENST00000435455 SMIM4Q8WVI0 70 aa12.57□□□□□ -0.4
SMPD4-207ENST00000435455 USMG5Q96IX5 58 aa12.57□□□□□ -0.4
SMPD4-207ENST00000435455 SLIRPQ9GZT3 109 aaKnown RBP12.57□□□□□ -0.4
SMPD4-207ENST00000435455 FAM212BQ9NTI7 297 aaPredicted RBP12.57□□□□□ -0.4
SMPD4-207ENST00000435455 SEC14L6B5MCN3 397 aa12.56□□□□□ -0.4
SMPD4-207ENST00000435455 TEX22C9J3V5 150 aa12.56□□□□□ -0.4
SMPD4-207ENST00000435455 CTDSPLO15194 276 aa12.56□□□□□ -0.4
SMPD4-207ENST00000435455 IL6RP08887 468 aaPredicted RBP12.56□□□□□ -0.4
SMPD4-207ENST00000435455 HLA-GP17693 338 aa12.56□□□□□ -0.4
SMPD4-207ENST00000435455 HOXD3P31249 432 aaPredicted RBP12.56□□□□□ -0.4
SMPD4-207ENST00000435455 IL18Q14116 193 aa12.56□□□□□ -0.4
SMPD4-207ENST00000435455 PHLDA2Q53GA4 152 aa12.56□□□□□ -0.4
SMPD4-207ENST00000435455 TTC9CQ8N5M4 171 aa12.56□□□□□ -0.4
SMPD4-207ENST00000435455 DMBX1Q8NFW5 382 aa12.56□□□□□ -0.4
SMPD4-207ENST00000435455 MCFD2Q8NI22 146 aa12.56□□□□□ -0.4
SMPD4-207ENST00000435455 IGHV4OR15-8A0A075B7B6 117 aa12.55□□□□□ -0.4
SMPD4-207ENST00000435455 A0A087WW49 117 aa12.55□□□□□ -0.4
SMPD4-207ENST00000435455 DPPA5A6NC42 116 aa12.55□□□□□ -0.4
SMPD4-207ENST00000435455 HMX3A6NHT5 357 aa12.55□□□□□ -0.4
SMPD4-207ENST00000435455 FAM223BA6NKX1 122 aa12.55□□□□□ -0.4
SMPD4-207ENST00000435455 MARCH11A6NNE9 402 aa12.55□□□□□ -0.4
SMPD4-207ENST00000435455 UPK2O00526 184 aa12.55□□□□□ -0.4
SMPD4-207ENST00000435455 OVOL1O14753 267 aa12.55□□□□□ -0.4
SMPD4-207ENST00000435455 RAB3DO95716 219 aa12.55□□□□□ -0.4
SMPD4-207ENST00000435455 CD74P04233 296 aa12.55□□□□□ -0.4
SMPD4-207ENST00000435455 ZNF735P0CB33 412 aa12.55□□□□□ -0.4
SMPD4-207ENST00000435455 PGAM2P15259 253 aa12.55□□□□□ -0.4
SMPD4-207ENST00000435455 LPAR6P43657 344 aa12.55□□□□□ -0.4
SMPD4-207ENST00000435455 STEAP1BQ6NZ63 245 aa12.55□□□□□ -0.4
SMPD4-207ENST00000435455 FAM223AQ8IWN6 122 aa12.55□□□□□ -0.4
SMPD4-207ENST00000435455 CADM3Q8N126 398 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 146.7 ms