RNA–Protein interactions for RNA: ENST00000435218.6

TMEM40-204, Transcript of transmembrane protein 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM40, Length 1,547 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-204ENST00000435218 UBE2KP61086 200 aa12.13□□□□□ -0.47
TMEM40-204ENST00000435218 TNFRSF9Q07011 255 aa12.13□□□□□ -0.47
TMEM40-204ENST00000435218 LGALSLQ3ZCW2 172 aaPredicted RBP12.13□□□□□ -0.47
TMEM40-204ENST00000435218 CYB5R2Q6BCY4 276 aa12.13□□□□□ -0.47
TMEM40-204ENST00000435218 OR4A16Q8NH70 328 aa12.13□□□□□ -0.47
TMEM40-204ENST00000435218 TMEM167AQ8TBQ9 72 aa12.13□□□□□ -0.47
TMEM40-204ENST00000435218 TMEM14BQ9NUH8 114 aa12.13□□□□□ -0.47
TMEM40-204ENST00000435218 FOXA2Q9Y261 457 aaPredicted RBP12.13□□□□□ -0.47
TMEM40-204ENST00000435218 NSG2Q9Y328 171 aa12.13□□□□□ -0.47
TMEM40-204ENST00000435218 IGHV3-72A0A0B4J1Y9 119 aa12.12□□□□□ -0.47
TMEM40-204ENST00000435218 RNF222A6NCQ9 220 aa12.12□□□□□ -0.47
TMEM40-204ENST00000435218 WRBO00258 174 aa12.12□□□□□ -0.47
TMEM40-204ENST00000435218 UPK2O00526 184 aa12.12□□□□□ -0.47
TMEM40-204ENST00000435218 SYNGR2O43760 224 aa12.12□□□□□ -0.47
TMEM40-204ENST00000435218 MED6O75586 246 aa12.12□□□□□ -0.47
TMEM40-204ENST00000435218 OR2F2O95006 317 aa12.12□□□□□ -0.47
TMEM40-204ENST00000435218 AVPP01185 164 aa12.12□□□□□ -0.47
TMEM40-204ENST00000435218 PVALBP20472 110 aaPredicted RBP12.12□□□□□ -0.47
TMEM40-204ENST00000435218 POLR2GP62487 172 aaKnown RBP eCLIP12.12□□□□□ -0.47
TMEM40-204ENST00000435218 OR2F1Q13607 317 aa12.12□□□□□ -0.47
TMEM40-204ENST00000435218 VMA21Q3ZAQ7 101 aa12.12□□□□□ -0.47
TMEM40-204ENST00000435218 ACOT7LQ6ZUV0 252 aa12.12□□□□□ -0.47
TMEM40-204ENST00000435218 TEX45Q8NA69 505 aa12.12□□□□□ -0.47
TMEM40-204ENST00000435218 C17orf50Q8WW18 174 aa12.12□□□□□ -0.47
TMEM40-204ENST00000435218 DCUN1D4Q92564 292 aa12.12□□□□□ -0.47
TMEM40-204ENST00000435218 RAB40CQ96S21 281 aa12.12□□□□□ -0.47
TMEM40-204ENST00000435218 TSNAXQ99598 290 aaKnown RBP12.12□□□□□ -0.47
TMEM40-204ENST00000435218 PRNDQ9UKY0 176 aa12.12□□□□□ -0.47
TMEM40-204ENST00000435218 ZNF257Q9Y2Q1 563 aa12.12□□□□□ -0.47
TMEM40-204ENST00000435218 AKAP9Q99996 3911 aa12.12□□□□□ -0.47
TMEM40-204ENST00000435218 LY86O95711 162 aa12.11□□□□□ -0.47
TMEM40-204ENST00000435218 FSHBP01225 129 aa12.11□□□□□ -0.47
TMEM40-204ENST00000435218 IGHV4-38-2P0DP08 117 aa12.11□□□□□ -0.47
TMEM40-204ENST00000435218 CXCL2P19875 107 aa12.11□□□□□ -0.47
TMEM40-204ENST00000435218 P2RY1P47900 373 aa12.11□□□□□ -0.47
TMEM40-204ENST00000435218 DYNLT3P51808 116 aa12.11□□□□□ -0.47
TMEM40-204ENST00000435218 TAS2R30P59541 319 aa12.11□□□□□ -0.47
TMEM40-204ENST00000435218 KLF17Q5JT82 389 aaPredicted RBP12.11□□□□□ -0.47
TMEM40-204ENST00000435218 THNSL2Q86YJ6 484 aa12.11□□□□□ -0.47
TMEM40-204ENST00000435218 AQP10Q96PS8 301 aa12.11□□□□□ -0.47
TMEM40-204ENST00000435218 MFFQ9GZY8 342 aa12.11□□□□□ -0.47
TMEM40-204ENST00000435218 MEGF9Q9H1U4 602 aa12.11□□□□□ -0.47
TMEM40-204ENST00000435218 FKBP11Q9NYL4 201 aa12.11□□□□□ -0.47
TMEM40-204ENST00000435218 WSB1Q9Y6I7 421 aa12.11□□□□□ -0.47
TMEM40-204ENST00000435218 TRAV3A0A0B4J244 114 aa12.11□□□□□ -0.47
TMEM40-204ENST00000435218 A0A0D9SG52 128 aa12.11□□□□□ -0.47
TMEM40-204ENST00000435218 SSSCA1O60232 199 aa12.11□□□□□ -0.47
TMEM40-204ENST00000435218 MOSP00540 346 aa12.11□□□□□ -0.47
TMEM40-204ENST00000435218 CRYGBP07316 175 aa12.11□□□□□ -0.47
TMEM40-204ENST00000435218 BRS3P32247 399 aa12.11□□□□□ -0.47
TMEM40-204ENST00000435218 SPCS3P61009 180 aa12.11□□□□□ -0.47
TMEM40-204ENST00000435218 Q8N6K4 173 aa12.11□□□□□ -0.47
TMEM40-204ENST00000435218 INO80EQ8NBZ0 244 aaPredicted RBP12.11□□□□□ -0.47
TMEM40-204ENST00000435218 NPBQ8NG41 125 aa12.11□□□□□ -0.47
TMEM40-204ENST00000435218 OR2T10Q8NGZ9 312 aa12.11□□□□□ -0.47
TMEM40-204ENST00000435218 RITA1Q96K30 269 aa12.11□□□□□ -0.47
TMEM40-204ENST00000435218 QTRT1Q9BXR0 403 aaKnown RBP12.11□□□□□ -0.47
TMEM40-204ENST00000435218 HSPB11Q9Y547 144 aa12.11□□□□□ -0.47
TMEM40-204ENST00000435218 CSMD1Q96PZ7 3565 aa12.1□□□□□ -0.47
TMEM40-204ENST00000435218 L7N2F9 121 aa12.1□□□□□ -0.47
TMEM40-204ENST00000435218 CHST1O43916 411 aa12.1□□□□□ -0.47
TMEM40-204ENST00000435218 RBMXL2O75526 392 aaKnown RBP12.1□□□□□ -0.47
TMEM40-204ENST00000435218 NDUFA3O95167 84 aa12.1□□□□□ -0.47
TMEM40-204ENST00000435218 IGKV1D-33P01593 117 aa12.1□□□□□ -0.47
TMEM40-204ENST00000435218 IGKV1-33P01594 117 aa12.1□□□□□ -0.47
TMEM40-204ENST00000435218 C4BPBP20851 252 aa12.1□□□□□ -0.47
TMEM40-204ENST00000435218 OR2B8PP59922 312 aa12.1□□□□□ -0.47
TMEM40-204ENST00000435218 RUSC1-AS1Q66K80 236 aa12.1□□□□□ -0.47
TMEM40-204ENST00000435218 KCNRGQ8N5I3 272 aa12.1□□□□□ -0.47
TMEM40-204ENST00000435218 OR5B3Q8NH48 314 aa12.1□□□□□ -0.47
TMEM40-204ENST00000435218 RBMXL1Q96E39 390 aaKnown RBP12.1□□□□□ -0.47
TMEM40-204ENST00000435218 EAF1Q96JC9 268 aaPredicted RBP12.1□□□□□ -0.47
TMEM40-204ENST00000435218 SMIM8Q96KF7 97 aa12.1□□□□□ -0.47
TMEM40-204ENST00000435218 MAGT1Q9H0U3 335 aa12.1□□□□□ -0.47
TMEM40-204ENST00000435218 RBKSQ9H477 322 aa12.1□□□□□ -0.47
TMEM40-204ENST00000435218 LYRM2Q9NU23 88 aaPredicted RBP12.1□□□□□ -0.47
TMEM40-204ENST00000435218 PLXNB1O43157 2135 aa12.09□□□□□ -0.47
TMEM40-204ENST00000435218 SLC25A17O43808 307 aa12.09□□□□□ -0.47
TMEM40-204ENST00000435218 GPR137BO60478 399 aa12.09□□□□□ -0.47
TMEM40-204ENST00000435218 NXPH3O95157 252 aa12.09□□□□□ -0.47
TMEM40-204ENST00000435218 TMEM50AO95807 157 aa12.09□□□□□ -0.47
TMEM40-204ENST00000435218 SNRNP70P08621 437 aaKnown RBP12.09□□□□□ -0.47
TMEM40-204ENST00000435218 S100A11P31949 105 aa12.09□□□□□ -0.47
TMEM40-204ENST00000435218 NUP62P37198 522 aaPredicted RBP12.09□□□□□ -0.47
TMEM40-204ENST00000435218 PAX9P55771 341 aa12.09□□□□□ -0.47
TMEM40-204ENST00000435218 HSPE1P61604 102 aaKnown RBP12.09□□□□□ -0.47
TMEM40-204ENST00000435218 RPL8P62917 257 aaKnown RBP12.09□□□□□ -0.47
TMEM40-204ENST00000435218 VAMP2P63027 116 aa12.09□□□□□ -0.47
TMEM40-204ENST00000435218 PSG5Q15238 335 aa12.09□□□□□ -0.47
TMEM40-204ENST00000435218 BRD3OSQ6XYD6 125 aa12.09□□□□□ -0.47
TMEM40-204ENST00000435218 CIARTQ8N365 385 aaPredicted RBP12.09□□□□□ -0.47
TMEM40-204ENST00000435218 OR2C3Q8N628 320 aa12.09□□□□□ -0.47
TMEM40-204ENST00000435218 CIB3Q96Q77 187 aaPredicted RBP12.09□□□□□ -0.47
TMEM40-204ENST00000435218 CSPG4Q6UVK1 2322 aa12.09□□□□□ -0.47
TMEM40-204ENST00000435218 NOTCH2Q04721 2471 aa12.09□□□□□ -0.47
TMEM40-204ENST00000435218 TSC22D2O75157 780 aa12.08□□□□□ -0.48
TMEM40-204ENST00000435218 FAM106CPP0CH98 169 aa12.08□□□□□ -0.48
TMEM40-204ENST00000435218 HKR1P10072 659 aa12.08□□□□□ -0.48
TMEM40-204ENST00000435218 RPL12P30050 165 aaKnown RBP12.08□□□□□ -0.48
TMEM40-204ENST00000435218 MAS1LP35410 378 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms