RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 ARHGDIBP52566 201 aa9.08□□□□□ -0.96
LINC00539-203ENST00000434601 TMEM177Q53S58 311 aa9.08□□□□□ -0.96
LINC00539-203ENST00000434601 CCDC144NLQ6NUI1 221 aa9.08□□□□□ -0.96
LINC00539-203ENST00000434601 TMEM65Q6PI78 240 aa9.08□□□□□ -0.96
LINC00539-203ENST00000434601 C12orf54Q6X4T0 127 aa9.08□□□□□ -0.96
LINC00539-203ENST00000434601 SSX9Q7RTT3 188 aa9.08□□□□□ -0.96
LINC00539-203ENST00000434601 LHFPL4Q7Z7J7 247 aa9.08□□□□□ -0.96
LINC00539-203ENST00000434601 MOB3BQ86TA1 216 aa9.08□□□□□ -0.96
LINC00539-203ENST00000434601 FOXRED2Q8IWF2 684 aa9.08□□□□□ -0.96
LINC00539-203ENST00000434601 TEX29Q8N6K0 151 aa9.08□□□□□ -0.96
LINC00539-203ENST00000434601 OR4C13Q8NGP0 309 aa9.08□□□□□ -0.96
LINC00539-203ENST00000434601 DCUN1D4Q92564 292 aa9.08□□□□□ -0.96
LINC00539-203ENST00000434601 FLYWCH2Q96CP2 140 aaKnown RBP9.08□□□□□ -0.96
LINC00539-203ENST00000434601 HARBI1Q96MB7 349 aa9.08□□□□□ -0.96
LINC00539-203ENST00000434601 AIFM2Q9BRQ8 373 aa9.08□□□□□ -0.96
LINC00539-203ENST00000434601 OR5AC2Q9NZP5 309 aa9.08□□□□□ -0.96
LINC00539-203ENST00000434601 RCL1Q9Y2P8 373 aaKnown RBP9.08□□□□□ -0.96
LINC00539-203ENST00000434601 AUP1Q9Y679 476 aa9.08□□□□□ -0.96
LINC00539-203ENST00000434601 IGHV3-72A0A0B4J1Y9 119 aa9.07□□□□□ -0.96
LINC00539-203ENST00000434601 TRAV40A0A0B4J280 105 aa9.07□□□□□ -0.96
LINC00539-203ENST00000434601 FAM90A26D6RGX4 464 aa9.07□□□□□ -0.96
LINC00539-203ENST00000434601 WRBO00258 174 aa9.07□□□□□ -0.96
LINC00539-203ENST00000434601 NPFFO15130 113 aa9.07□□□□□ -0.96
LINC00539-203ENST00000434601 NXPH3O95157 252 aa9.07□□□□□ -0.96
LINC00539-203ENST00000434601 RLN2P04090 185 aa9.07□□□□□ -0.96
LINC00539-203ENST00000434601 OR9G9P0C7N8 305 aa9.07□□□□□ -0.96
LINC00539-203ENST00000434601 SAA4P35542 130 aa9.07□□□□□ -0.96
LINC00539-203ENST00000434601 CXorf66Q5JRM2 361 aaPredicted RBP9.07□□□□□ -0.96
LINC00539-203ENST00000434601 LAMTOR1Q6IAA8 161 aa9.07□□□□□ -0.96
LINC00539-203ENST00000434601 OR4A47Q6IF82 309 aa9.07□□□□□ -0.96
LINC00539-203ENST00000434601 ZNF546Q86UE3 836 aa9.07□□□□□ -0.96
LINC00539-203ENST00000434601 VKORC1L1Q8N0U8 176 aa9.07□□□□□ -0.96
LINC00539-203ENST00000434601 RHOVQ96L33 236 aa9.07□□□□□ -0.96
LINC00539-203ENST00000434601 RNF126Q9BV68 326 aa9.07□□□□□ -0.96
LINC00539-203ENST00000434601 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.07□□□□□ -0.96
LINC00539-203ENST00000434601 TNFSF18Q9UNG2 199 aa9.07□□□□□ -0.96
LINC00539-203ENST00000434601 HSPB11Q9Y547 144 aa9.07□□□□□ -0.96
LINC00539-203ENST00000434601 IGHV1-69DA0A0B4J2H0 117 aa9.06□□□□□ -0.96
LINC00539-203ENST00000434601 CENPVL3A0A0U1RRI6 287 aa9.06□□□□□ -0.96
LINC00539-203ENST00000434601 RNF222A6NCQ9 220 aa9.06□□□□□ -0.96
LINC00539-203ENST00000434601 J3QLI3 93 aa9.06□□□□□ -0.96
LINC00539-203ENST00000434601 L7N2F9 121 aa9.06□□□□□ -0.96
LINC00539-203ENST00000434601 TIMM23O14925 209 aa9.06□□□□□ -0.96
LINC00539-203ENST00000434601 SSSCA1O60232 199 aa9.06□□□□□ -0.96
LINC00539-203ENST00000434601 RBMXL2O75526 392 aaKnown RBP9.06□□□□□ -0.96
LINC00539-203ENST00000434601 SNAPC5O75971 98 aa9.06□□□□□ -0.96
LINC00539-203ENST00000434601 IGHV1-69P01742 117 aa9.06□□□□□ -0.96
LINC00539-203ENST00000434601 SAA1P0DJI8 122 aaPredicted RBP9.06□□□□□ -0.96
LINC00539-203ENST00000434601 PVALBP20472 110 aaPredicted RBP9.06□□□□□ -0.96
LINC00539-203ENST00000434601 OR2B8PP59922 312 aa9.06□□□□□ -0.96
LINC00539-203ENST00000434601 RPS16P62249 146 aaKnown RBP9.06□□□□□ -0.96
LINC00539-203ENST00000434601 POLR2GP62487 172 aaKnown RBP eCLIP9.06□□□□□ -0.96
LINC00539-203ENST00000434601 ID3Q02535 119 aa9.06□□□□□ -0.96
LINC00539-203ENST00000434601 HABP2Q14520 560 aaPredicted RBP9.06□□□□□ -0.96
LINC00539-203ENST00000434601 SSX2Q16385 188 aa9.06□□□□□ -0.96
LINC00539-203ENST00000434601 LGALSLQ3ZCW2 172 aaPredicted RBP9.06□□□□□ -0.96
LINC00539-203ENST00000434601 CFHR4Q92496 578 aa9.06□□□□□ -0.96
LINC00539-203ENST00000434601 MS4A7Q9GZW8 240 aaPredicted RBP9.06□□□□□ -0.96
LINC00539-203ENST00000434601 C7orf69Q9H7B7 122 aa9.06□□□□□ -0.96
LINC00539-203ENST00000434601 BET1LQ9NYM9 111 aa9.06□□□□□ -0.96
LINC00539-203ENST00000434601 HILPDAQ9Y5L2 63 aa9.06□□□□□ -0.96
LINC00539-203ENST00000434601 C15orf61A6NNL5 157 aa9.05□□□□□ -0.96
LINC00539-203ENST00000434601 SRRM4A7MD48 611 aaKnown RBP9.05□□□□□ -0.96
LINC00539-203ENST00000434601 E5RGE8 158 aa9.05□□□□□ -0.96
LINC00539-203ENST00000434601 CXCL2P19875 107 aa9.05□□□□□ -0.96
LINC00539-203ENST00000434601 CD1BP29016 333 aa9.05□□□□□ -0.96
LINC00539-203ENST00000434601 VAMP2P63027 116 aa9.05□□□□□ -0.96
LINC00539-203ENST00000434601 TNFRSF9Q07011 255 aa9.05□□□□□ -0.96
LINC00539-203ENST00000434601 ZNF345Q14585 488 aa9.05□□□□□ -0.96
LINC00539-203ENST00000434601 VMA21Q3ZAQ7 101 aa9.05□□□□□ -0.96
LINC00539-203ENST00000434601 AARDQ4LEZ3 155 aa9.05□□□□□ -0.96
LINC00539-203ENST00000434601 GPR157Q5UAW9 335 aa9.05□□□□□ -0.96
LINC00539-203ENST00000434601 PUSL1Q8N0Z8 303 aaKnown RBP9.05□□□□□ -0.96
LINC00539-203ENST00000434601 DYNAPQ8N1N2 210 aa9.05□□□□□ -0.96
LINC00539-203ENST00000434601 INO80EQ8NBZ0 244 aaPredicted RBP9.05□□□□□ -0.96
LINC00539-203ENST00000434601 OR4A16Q8NH70 328 aa9.05□□□□□ -0.96
LINC00539-203ENST00000434601 VSTM2AQ8TAG5 236 aa9.05□□□□□ -0.96
LINC00539-203ENST00000434601 ZNF418Q8TF45 676 aaPredicted RBP9.05□□□□□ -0.96
LINC00539-203ENST00000434601 RBMXL1Q96E39 390 aaKnown RBP9.05□□□□□ -0.96
LINC00539-203ENST00000434601 MALSU1Q96EH3 234 aa9.05□□□□□ -0.96
LINC00539-203ENST00000434601 QTRT1Q9BXR0 403 aaKnown RBP9.05□□□□□ -0.96
LINC00539-203ENST00000434601 MFFQ9GZY8 342 aa9.05□□□□□ -0.96
LINC00539-203ENST00000434601 MAGT1Q9H0U3 335 aa9.05□□□□□ -0.96
LINC00539-203ENST00000434601 C11orf1Q9H5F2 150 aa9.05□□□□□ -0.96
LINC00539-203ENST00000434601 PLSCR3Q9NRY6 295 aa9.05□□□□□ -0.96
LINC00539-203ENST00000434601 HSPB7Q9UBY9 170 aa9.05□□□□□ -0.96
LINC00539-203ENST00000434601 NSG2Q9Y328 171 aa9.05□□□□□ -0.96
LINC00539-203ENST00000434601 BOLA1Q9Y3E2 137 aa9.05□□□□□ -0.96
LINC00539-203ENST00000434601 IGHV3OR16-10A0A075B7F0 116 aa9.04□□□□□ -0.96
LINC00539-203ENST00000434601 TRAV3A0A0B4J244 114 aa9.04□□□□□ -0.96
LINC00539-203ENST00000434601 UPK2O00526 184 aa9.04□□□□□ -0.96
LINC00539-203ENST00000434601 SYNGR2O43760 224 aa9.04□□□□□ -0.96
LINC00539-203ENST00000434601 MED6O75586 246 aa9.04□□□□□ -0.96
LINC00539-203ENST00000434601 KBTBD11O94819 623 aa9.04□□□□□ -0.96
LINC00539-203ENST00000434601 OR2F2O95006 317 aa9.04□□□□□ -0.96
LINC00539-203ENST00000434601 VENTXO95231 258 aa9.04□□□□□ -0.96
LINC00539-203ENST00000434601 IGLV2-23P01705 113 aa9.04□□□□□ -0.96
LINC00539-203ENST00000434601 IGHV4-38-2P0DP08 117 aa9.04□□□□□ -0.96
LINC00539-203ENST00000434601 C4BPBP20851 252 aa9.04□□□□□ -0.96
LINC00539-203ENST00000434601 NUP62P37198 522 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms