RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 FAM90A2PQ658T7 463 aa12.96□□□□□ -0.33
SCARF1-203ENST00000434376 Q8IYB0 196 aa12.96□□□□□ -0.33
SCARF1-203ENST00000434376 IGFBPL1Q8WX77 278 aa12.96□□□□□ -0.33
SCARF1-203ENST00000434376 CSPG4Q6UVK1 2322 aa12.96□□□□□ -0.33
SCARF1-203ENST00000434376 FAM3BP58499 235 aaPredicted RBP12.96□□□□□ -0.33
SCARF1-203ENST00000434376 ASCL5Q7RTU5 278 aa12.96□□□□□ -0.33
SCARF1-203ENST00000434376 RBMXL3Q8N7X1 1067 aaKnown RBP12.96□□□□□ -0.33
SCARF1-203ENST00000434376 SSMEM1Q8WWF3 244 aa12.96□□□□□ -0.33
SCARF1-203ENST00000434376 SCNM1Q9BWG6 230 aa12.96□□□□□ -0.33
SCARF1-203ENST00000434376 BSNQ9UPA5 3926 aa12.96□□□□□ -0.34
SCARF1-203ENST00000434376 A0A1B0GU03 582 aa12.96□□□□□ -0.34
SCARF1-203ENST00000434376 ZNF737O75373 536 aa12.96□□□□□ -0.34
SCARF1-203ENST00000434376 SELENOVP59797 346 aa12.96□□□□□ -0.34
SCARF1-203ENST00000434376 HAPLN4Q86UW8 402 aa12.96□□□□□ -0.34
SCARF1-203ENST00000434376 OR13D1Q8NGV5 346 aa12.96□□□□□ -0.34
SCARF1-203ENST00000434376 QTRT1Q9BXR0 403 aaKnown RBP12.96□□□□□ -0.34
SCARF1-203ENST00000434376 TRGV8A0A0C4DH27 118 aa12.95□□□□□ -0.34
SCARF1-203ENST00000434376 ZNF146Q15072 292 aa12.95□□□□□ -0.34
SCARF1-203ENST00000434376 RCC1LQ96I51 464 aaKnown RBP12.95□□□□□ -0.34
SCARF1-203ENST00000434376 SMDT1Q9H4I9 107 aa12.95□□□□□ -0.34
SCARF1-203ENST00000434376 MKRN2OSH3BPM6 223 aa12.95□□□□□ -0.34
SCARF1-203ENST00000434376 CATR1Q13166 79 aa12.95□□□□□ -0.34
SCARF1-203ENST00000434376 ZNF295-AS1Q8N0V1 137 aa12.95□□□□□ -0.34
SCARF1-203ENST00000434376 RNF115Q9Y4L5 304 aa12.95□□□□□ -0.34
SCARF1-203ENST00000434376 OOEPA6NGQ2 149 aa12.95□□□□□ -0.34
SCARF1-203ENST00000434376 MMP23AO75900 390 aa12.95□□□□□ -0.34
SCARF1-203ENST00000434376 ZNF134P52741 427 aa12.95□□□□□ -0.34
SCARF1-203ENST00000434376 TMEM183AQ8IXX5 376 aa12.95□□□□□ -0.34
SCARF1-203ENST00000434376 Q8NFD4 153 aa12.95□□□□□ -0.34
SCARF1-203ENST00000434376 SLC25A15Q9Y619 301 aa12.95□□□□□ -0.34
SCARF1-203ENST00000434376 IGHV3-72A0A0B4J1Y9 119 aa12.94□□□□□ -0.34
SCARF1-203ENST00000434376 AHRRA9YTQ3 701 aa12.94□□□□□ -0.34
SCARF1-203ENST00000434376 LY6HO94772 140 aa12.94□□□□□ -0.34
SCARF1-203ENST00000434376 BSXQ3C1V8 233 aa12.94□□□□□ -0.34
SCARF1-203ENST00000434376 DTD1Q8TEA8 209 aa12.94□□□□□ -0.34
SCARF1-203ENST00000434376 R3HDM4Q96D70 268 aa12.94□□□□□ -0.34
SCARF1-203ENST00000434376 TRAV38-1A0A0B4J264 116 aa12.94□□□□□ -0.34
SCARF1-203ENST00000434376 A6NNC1 897 aa12.94□□□□□ -0.34
SCARF1-203ENST00000434376 MARCH11A6NNE9 402 aa12.94□□□□□ -0.34
SCARF1-203ENST00000434376 FAM90A27PA6NNH2 459 aa12.94□□□□□ -0.34
SCARF1-203ENST00000434376 SDF2L1Q9HCN8 221 aa12.94□□□□□ -0.34
SCARF1-203ENST00000434376 A8MWP6 167 aa12.93□□□□□ -0.34
SCARF1-203ENST00000434376 PRRG2O14669 202 aa12.93□□□□□ -0.34
SCARF1-203ENST00000434376 MAS1LP35410 378 aa12.93□□□□□ -0.34
SCARF1-203ENST00000434376 PAX5Q02548 391 aa12.93□□□□□ -0.34
SCARF1-203ENST00000434376 TNFRSF9Q07011 255 aa12.93□□□□□ -0.34
SCARF1-203ENST00000434376 JOSD1Q15040 202 aaPredicted RBP12.93□□□□□ -0.34
SCARF1-203ENST00000434376 TMEM241Q24JQ0 296 aa12.93□□□□□ -0.34
SCARF1-203ENST00000434376 IL22RA2Q969J5 263 aa12.93□□□□□ -0.34
SCARF1-203ENST00000434376 PLSCR4Q9NRQ2 329 aa12.93□□□□□ -0.34
SCARF1-203ENST00000434376 COL27A1Q8IZC6 1860 aaPredicted RBP12.93□□□□□ -0.34
SCARF1-203ENST00000434376 SETD2Q9BYW2 2564 aaPredicted RBP12.93□□□□□ -0.34
SCARF1-203ENST00000434376 ACTL6BO94805 426 aa12.93□□□□□ -0.34
SCARF1-203ENST00000434376 CCL3L1P16619 93 aa12.93□□□□□ -0.34
SCARF1-203ENST00000434376 SPCS3P61009 180 aa12.93□□□□□ -0.34
SCARF1-203ENST00000434376 IFNA1P01562 189 aa12.93□□□□□ -0.34
SCARF1-203ENST00000434376 OR9G9P0C7N8 305 aa12.93□□□□□ -0.34
SCARF1-203ENST00000434376 HBG1P69891 147 aa12.93□□□□□ -0.34
SCARF1-203ENST00000434376 HBG2P69892 147 aa12.93□□□□□ -0.34
SCARF1-203ENST00000434376 ZNF645Q8N7E2 425 aa12.93□□□□□ -0.34
SCARF1-203ENST00000434376 ZNF709Q8N972 641 aa12.93□□□□□ -0.34
SCARF1-203ENST00000434376 OR4A16Q8NH70 328 aa12.93□□□□□ -0.34
SCARF1-203ENST00000434376 A0A1B0GW64 132 aa12.92□□□□□ -0.34
SCARF1-203ENST00000434376 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.92□□□□□ -0.34
SCARF1-203ENST00000434376 MDH2P40926 338 aaKnown RBP12.92□□□□□ -0.34
SCARF1-203ENST00000434376 GNB2P62879 340 aa12.92□□□□□ -0.34
SCARF1-203ENST00000434376 LHFPL4Q7Z7J7 247 aa12.92□□□□□ -0.34
SCARF1-203ENST00000434376 CELSR1Q9NYQ6 3014 aa12.92□□□□□ -0.34
SCARF1-203ENST00000434376 GZMHP20718 246 aa12.92□□□□□ -0.34
SCARF1-203ENST00000434376 ZNF726P1Q15940 193 aa12.92□□□□□ -0.34
SCARF1-203ENST00000434376 FAM90A1Q86YD7 464 aa12.92□□□□□ -0.34
SCARF1-203ENST00000434376 RAB40CQ96S21 281 aa12.92□□□□□ -0.34
SCARF1-203ENST00000434376 NDUFAF3Q9BU61 184 aa12.92□□□□□ -0.34
SCARF1-203ENST00000434376 A0A1W2PRD5 423 aa12.91□□□□□ -0.34
SCARF1-203ENST00000434376 A0A1W2PRF3 423 aa12.91□□□□□ -0.34
SCARF1-203ENST00000434376 A0A1W2PRM7 423 aa12.91□□□□□ -0.34
SCARF1-203ENST00000434376 B4DEV8 164 aa12.91□□□□□ -0.34
SCARF1-203ENST00000434376 FFAR4Q5NUL3 377 aa12.91□□□□□ -0.34
SCARF1-203ENST00000434376 C1orf185Q5T7R7 199 aa12.91□□□□□ -0.34
SCARF1-203ENST00000434376 OR10P1Q8NGE3 313 aa12.91□□□□□ -0.34
SCARF1-203ENST00000434376 VAX2Q9UIW0 290 aa12.91□□□□□ -0.34
SCARF1-203ENST00000434376 PKD1L2Q7Z442 2459 aa12.91□□□□□ -0.34
SCARF1-203ENST00000434376 COX5AP20674 150 aa12.91□□□□□ -0.34
SCARF1-203ENST00000434376 BRWD1-AS2P59051 145 aa12.91□□□□□ -0.34
SCARF1-203ENST00000434376 PNRC1Q12796 327 aaPredicted RBP12.91□□□□□ -0.34
SCARF1-203ENST00000434376 MSMO1Q15800 293 aa12.91□□□□□ -0.34
SCARF1-203ENST00000434376 FAM78BQ5VT40 261 aa12.91□□□□□ -0.34
SCARF1-203ENST00000434376 ZNF525Q8N782 197 aa12.91□□□□□ -0.34
SCARF1-203ENST00000434376 TMEM18Q96B42 140 aa12.91□□□□□ -0.34
SCARF1-203ENST00000434376 KMT2EQ8IZD2 1858 aa12.91□□□□□ -0.34
SCARF1-203ENST00000434376 ZNF320A2RRD8 509 aa12.91□□□□□ -0.34
SCARF1-203ENST00000434376 IGKV1D-33P01593 117 aa12.91□□□□□ -0.34
SCARF1-203ENST00000434376 IGKV1-33P01594 117 aa12.91□□□□□ -0.34
SCARF1-203ENST00000434376 IRF2P14316 349 aa12.91□□□□□ -0.34
SCARF1-203ENST00000434376 CD82P27701 267 aa12.91□□□□□ -0.34
SCARF1-203ENST00000434376 C1orf229Q6ZS94 237 aaPredicted RBP12.91□□□□□ -0.34
SCARF1-203ENST00000434376 LINC01560Q8TB33 94 aa12.91□□□□□ -0.34
SCARF1-203ENST00000434376 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.91□□□□□ -0.34
SCARF1-203ENST00000434376 CRYBG3Q68DQ2 2970 aa12.91□□□□□ -0.34
SCARF1-203ENST00000434376 IGHV3-21A0A0B4J1V1 117 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms