RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 SPANXN5Q5MJ07 72 aa6.15□□□□□ -1.42
COL17A1-204ENST00000433822 ZNF474Q6S9Z5 364 aaPredicted RBP6.15□□□□□ -1.42
COL17A1-204ENST00000433822 ZNF826PQ6ZT77 177 aa6.15□□□□□ -1.42
COL17A1-204ENST00000433822 PRR18Q8N4B5 295 aa6.15□□□□□ -1.42
COL17A1-204ENST00000433822 CD177Q8N6Q3 437 aa6.15□□□□□ -1.42
COL17A1-204ENST00000433822 CYB561D1Q8N8Q1 229 aa6.15□□□□□ -1.42
COL17A1-204ENST00000433822 CA5BP1Q8WTZ4 195 aa6.15□□□□□ -1.42
COL17A1-204ENST00000433822 DDB2Q92466 427 aa6.15□□□□□ -1.42
COL17A1-204ENST00000433822 RAB39BQ96DA2 213 aa6.15□□□□□ -1.42
COL17A1-204ENST00000433822 RARRES2Q99969 163 aa6.15□□□□□ -1.42
COL17A1-204ENST00000433822 RSG1Q9BU20 258 aa6.15□□□□□ -1.42
COL17A1-204ENST00000433822 ABHD14AQ9BUJ0 271 aa6.15□□□□□ -1.42
COL17A1-204ENST00000433822 MAP1LC3BQ9GZQ8 125 aa6.15□□□□□ -1.42
COL17A1-204ENST00000433822 OPN3Q9H1Y3 402 aaPredicted RBP6.15□□□□□ -1.42
COL17A1-204ENST00000433822 CHODLQ9H9P2 273 aa6.15□□□□□ -1.42
COL17A1-204ENST00000433822 MSL2Q9HCI7 577 aa6.15□□□□□ -1.42
COL17A1-204ENST00000433822 ELOVL5Q9NYP7 299 aa6.15□□□□□ -1.42
COL17A1-204ENST00000433822 WDR83OSQ9Y284 106 aa6.15□□□□□ -1.42
COL17A1-204ENST00000433822 FAM215AQ9Y5M1 114 aa6.15□□□□□ -1.42
COL17A1-204ENST00000433822 NAV3Q8IVL0 2385 aa6.15□□□□□ -1.43
COL17A1-204ENST00000433822 CRYBG3Q68DQ2 2970 aa6.15□□□□□ -1.43
COL17A1-204ENST00000433822 DSCAML1Q8TD84 2053 aa6.14□□□□□ -1.43
COL17A1-204ENST00000433822 HEATR1Q9H583 2144 aaKnown RBP6.14□□□□□ -1.43
COL17A1-204ENST00000433822 DNHD1Q96M86 4753 aa6.14□□□□□ -1.43
COL17A1-204ENST00000433822 TRBV24-1A0A075B6N3 115 aa6.14□□□□□ -1.43
COL17A1-204ENST00000433822 ZNF98A6NK75 572 aa6.14□□□□□ -1.43
COL17A1-204ENST00000433822 ZNF729A6NN14 1252 aaPredicted RBP6.14□□□□□ -1.43
COL17A1-204ENST00000433822 LINC00473A8K010 186 aa6.14□□□□□ -1.43
COL17A1-204ENST00000433822 H3BP45 60 aa6.14□□□□□ -1.43
COL17A1-204ENST00000433822 RAMP3O60896 148 aa6.14□□□□□ -1.43
COL17A1-204ENST00000433822 VENTXO95231 258 aa6.14□□□□□ -1.43
COL17A1-204ENST00000433822 CYB5R3P00387 301 aaPredicted RBP6.14□□□□□ -1.43
COL17A1-204ENST00000433822 KRASP01116 189 aa6.14□□□□□ -1.43
COL17A1-204ENST00000433822 OPN1MWP04001 364 aa6.14□□□□□ -1.43
COL17A1-204ENST00000433822 S100A6P06703 90 aa6.14□□□□□ -1.43
COL17A1-204ENST00000433822 OPN1MW2P0DN77 364 aa6.14□□□□□ -1.43
COL17A1-204ENST00000433822 OPN1MW3P0DN78 364 aa6.14□□□□□ -1.43
COL17A1-204ENST00000433822 NQO2P16083 231 aa6.14□□□□□ -1.43
COL17A1-204ENST00000433822 TNFSF4P23510 183 aa6.14□□□□□ -1.43
COL17A1-204ENST00000433822 SSTR5P35346 364 aa6.14□□□□□ -1.43
COL17A1-204ENST00000433822 G6PCP35575 357 aa6.14□□□□□ -1.43
COL17A1-204ENST00000433822 GPR12P47775 334 aa6.14□□□□□ -1.43
COL17A1-204ENST00000433822 CEBPDP49716 269 aaPredicted RBP6.14□□□□□ -1.43
COL17A1-204ENST00000433822 PSMB3P49720 205 aa6.14□□□□□ -1.43
COL17A1-204ENST00000433822 THBS3P49746 956 aa6.14□□□□□ -1.43
COL17A1-204ENST00000433822 OR2B8PP59922 312 aa6.14□□□□□ -1.43
COL17A1-204ENST00000433822 ERVK-16P61578 105 aa6.14□□□□□ -1.43
COL17A1-204ENST00000433822 IZUMO4Q1ZYL8 232 aa6.14□□□□□ -1.43
COL17A1-204ENST00000433822 ACOT6Q3I5F7 207 aaPredicted RBP6.14□□□□□ -1.43
COL17A1-204ENST00000433822 TEX36Q5VZQ5 186 aa6.14□□□□□ -1.43
COL17A1-204ENST00000433822 STUMQ69YW2 141 aa6.14□□□□□ -1.43
COL17A1-204ENST00000433822 CYP2G1PQ6ZSU1 146 aa6.14□□□□□ -1.43
COL17A1-204ENST00000433822 OR2Z1Q8NG97 314 aa6.14□□□□□ -1.43
COL17A1-204ENST00000433822 OR4S2Q8NH73 311 aa6.14□□□□□ -1.43
COL17A1-204ENST00000433822 R3HDM4Q96D70 268 aa6.14□□□□□ -1.43
COL17A1-204ENST00000433822 OR2V2Q96R30 315 aa6.14□□□□□ -1.43
COL17A1-204ENST00000433822 ACTR3CQ9C0K3 210 aaPredicted RBP6.14□□□□□ -1.43
COL17A1-204ENST00000433822 SAV1Q9H4B6 383 aaPredicted RBP6.14□□□□□ -1.43
COL17A1-204ENST00000433822 SDF2L1Q9HCN8 221 aa6.14□□□□□ -1.43
COL17A1-204ENST00000433822 SLC39A9Q9NUM3 307 aa6.14□□□□□ -1.43
COL17A1-204ENST00000433822 RNF7Q9UBF6 113 aa6.14□□□□□ -1.43
COL17A1-204ENST00000433822 PSG11Q9UQ72 335 aa6.14□□□□□ -1.43
COL17A1-204ENST00000433822 PUS1Q9Y606 427 aaKnown RBP eCLIP6.14□□□□□ -1.43
COL17A1-204ENST00000433822 ARL2-SNX15V9GYD0 113 aa6.14□□□□□ -1.43
COL17A1-204ENST00000433822 NF1P21359 2839 aa6.14□□□□□ -1.43
COL17A1-204ENST00000433822 FBN3Q75N90 2809 aa6.14□□□□□ -1.43
COL17A1-204ENST00000433822 MTORP42345 2549 aa6.13□□□□□ -1.43
COL17A1-204ENST00000433822 KBTBD11-OT1A0A1B0GTJ5 212 aa6.13□□□□□ -1.43
COL17A1-204ENST00000433822 UBE2L5PA0A1B0GUS4 154 aa6.13□□□□□ -1.43
COL17A1-204ENST00000433822 A0A1W2PPH5 198 aa6.13□□□□□ -1.43
COL17A1-204ENST00000433822 C15orf62A8K5M9 175 aa6.13□□□□□ -1.43
COL17A1-204ENST00000433822 A8MXE2 369 aa6.13□□□□□ -1.43
COL17A1-204ENST00000433822 CLDN34H7C241 214 aa6.13□□□□□ -1.43
COL17A1-204ENST00000433822 AP4M1O00189 453 aa6.13□□□□□ -1.43
COL17A1-204ENST00000433822 CYB5BO43169 146 aa6.13□□□□□ -1.43
COL17A1-204ENST00000433822 PROP1O75360 226 aa6.13□□□□□ -1.43
COL17A1-204ENST00000433822 KBTBD11O94819 623 aa6.13□□□□□ -1.43
COL17A1-204ENST00000433822 EGR1P18146 543 aa6.13□□□□□ -1.43
COL17A1-204ENST00000433822 FGF7P21781 194 aa6.13□□□□□ -1.43
COL17A1-204ENST00000433822 VDAC2P45880 294 aaPredicted RBP6.13□□□□□ -1.43
COL17A1-204ENST00000433822 MEF2BQ02080 365 aaPredicted RBP6.13□□□□□ -1.43
COL17A1-204ENST00000433822 HAGHQ16775 308 aa6.13□□□□□ -1.43
COL17A1-204ENST00000433822 FAM71F2Q6NXP2 309 aa6.13□□□□□ -1.43
COL17A1-204ENST00000433822 ZNF788Q6ZQV5 615 aa6.13□□□□□ -1.43
COL17A1-204ENST00000433822 RPP25LQ8N5L8 163 aaKnown RBP6.13□□□□□ -1.43
COL17A1-204ENST00000433822 RBMXL3Q8N7X1 1067 aaKnown RBP6.13□□□□□ -1.43
COL17A1-204ENST00000433822 ZNF709Q8N972 641 aa6.13□□□□□ -1.43
COL17A1-204ENST00000433822 SYT8Q8NBV8 401 aa6.13□□□□□ -1.43
COL17A1-204ENST00000433822 LHX4Q969G2 390 aa6.13□□□□□ -1.43
COL17A1-204ENST00000433822 BTF3L4Q96K17 158 aa6.13□□□□□ -1.43
COL17A1-204ENST00000433822 S1PR3Q99500 378 aa6.13□□□□□ -1.43
COL17A1-204ENST00000433822 NPCDR1Q9BY65 106 aa6.13□□□□□ -1.43
COL17A1-204ENST00000433822 IFI27L2Q9H2X8 130 aa6.13□□□□□ -1.43
COL17A1-204ENST00000433822 ESRP2Q9H6T0 727 aaKnown RBP6.13□□□□□ -1.43
COL17A1-204ENST00000433822 ZNF665Q9H7R5 613 aa6.13□□□□□ -1.43
COL17A1-204ENST00000433822 UFSP2Q9NUQ7 469 aa6.13□□□□□ -1.43
COL17A1-204ENST00000433822 GFOD1Q9NXC2 390 aa6.13□□□□□ -1.43
COL17A1-204ENST00000433822 CALYQ9NYX4 217 aa6.13□□□□□ -1.43
COL17A1-204ENST00000433822 GNG13Q9P2W3 67 aa6.13□□□□□ -1.43
COL17A1-204ENST00000433822 GNG12Q9UBI6 72 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms