RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 TMEM204Q9BSN7 226 aa9.52□□□□□ -0.89
CLDN4-202ENST00000431918 GAB2Q9UQC2 676 aa9.52□□□□□ -0.89
CLDN4-202ENST00000431918 MGAQ8IWI9 3026 aa9.51□□□□□ -0.89
CLDN4-202ENST00000431918 TRBV6-6A0A0A6YYG2 114 aa9.51□□□□□ -0.89
CLDN4-202ENST00000431918 CD5P06127 495 aa9.51□□□□□ -0.89
CLDN4-202ENST00000431918 RAB7AP51149 207 aa9.51□□□□□ -0.89
CLDN4-202ENST00000431918 ARL16Q0P5N6 197 aa9.51□□□□□ -0.89
CLDN4-202ENST00000431918 ZNF66Q6ZN08 573 aa9.51□□□□□ -0.89
CLDN4-202ENST00000431918 Q6ZS92 163 aa9.51□□□□□ -0.89
CLDN4-202ENST00000431918 SMIM15Q7Z3B0 74 aa9.51□□□□□ -0.89
CLDN4-202ENST00000431918 RBMXL3Q8N7X1 1067 aaKnown RBP9.51□□□□□ -0.89
CLDN4-202ENST00000431918 RCC1LQ96I51 464 aaKnown RBP9.51□□□□□ -0.89
CLDN4-202ENST00000431918 LRFN3Q9BTN0 628 aa9.51□□□□□ -0.89
CLDN4-202ENST00000431918 COMMD5Q9GZQ3 224 aa9.51□□□□□ -0.89
CLDN4-202ENST00000431918 DKK4Q9UBT3 224 aa9.51□□□□□ -0.89
CLDN4-202ENST00000431918 MBD3L4A6NDZ8 208 aaPredicted RBP9.51□□□□□ -0.89
CLDN4-202ENST00000431918 MBD3L3A6NE82 208 aaPredicted RBP9.51□□□□□ -0.89
CLDN4-202ENST00000431918 MBD3L5A6NJ08 208 aaPredicted RBP9.51□□□□□ -0.89
CLDN4-202ENST00000431918 PTTG1IPP53801 180 aa9.51□□□□□ -0.89
CLDN4-202ENST00000431918 MBD3L2Q8NHZ7 208 aaPredicted RBP9.51□□□□□ -0.89
CLDN4-202ENST00000431918 SLC25A10Q9UBX3 287 aaPredicted RBP9.51□□□□□ -0.89
CLDN4-202ENST00000431918 LINC00473A8K010 186 aa9.51□□□□□ -0.89
CLDN4-202ENST00000431918 HPRT1P00492 218 aa9.51□□□□□ -0.89
CLDN4-202ENST00000431918 MDKP21741 143 aaPredicted RBP9.51□□□□□ -0.89
CLDN4-202ENST00000431918 CDC34P49427 236 aaPredicted RBP9.51□□□□□ -0.89
CLDN4-202ENST00000431918 PRB3Q04118 309 aaPredicted RBP9.51□□□□□ -0.89
CLDN4-202ENST00000431918 TMEM41BQ5BJD5 291 aa9.51□□□□□ -0.89
CLDN4-202ENST00000431918 MBNL3Q9NUK0 354 aaKnown RBP9.51□□□□□ -0.89
CLDN4-202ENST00000431918 IGKV1D-17A0A075B6S4 117 aa9.5□□□□□ -0.89
CLDN4-202ENST00000431918 C20orf202A1L168 122 aa9.5□□□□□ -0.89
CLDN4-202ENST00000431918 SRRM5B3KS81 715 aa9.5□□□□□ -0.89
CLDN4-202ENST00000431918 BSPH1Q075Z2 132 aa9.5□□□□□ -0.89
CLDN4-202ENST00000431918 TFF3Q07654 80 aa9.5□□□□□ -0.89
CLDN4-202ENST00000431918 TCF15Q12870 199 aa9.5□□□□□ -0.89
CLDN4-202ENST00000431918 DAZAP2Q15038 168 aaPredicted RBP9.5□□□□□ -0.89
CLDN4-202ENST00000431918 AARDQ4LEZ3 155 aa9.5□□□□□ -0.89
CLDN4-202ENST00000431918 LRRC10Q5BKY1 277 aa9.5□□□□□ -0.89
CLDN4-202ENST00000431918 CLEC2AQ6UVW9 174 aa9.5□□□□□ -0.89
CLDN4-202ENST00000431918 WDR61Q9GZS3 305 aaKnown RBP9.5□□□□□ -0.89
CLDN4-202ENST00000431918 TMEM140Q9NV12 185 aa9.5□□□□□ -0.89
CLDN4-202ENST00000431918 TRAV38-1A0A0B4J264 116 aa9.5□□□□□ -0.89
CLDN4-202ENST00000431918 PAGE4O60829 102 aa9.5□□□□□ -0.89
CLDN4-202ENST00000431918 APELAP0DMC3 54 aa9.5□□□□□ -0.89
CLDN4-202ENST00000431918 BCL2P10415 239 aa9.5□□□□□ -0.89
CLDN4-202ENST00000431918 ERVFRD-1P60508 538 aa9.5□□□□□ -0.89
CLDN4-202ENST00000431918 ABHD5Q8WTS1 349 aa9.5□□□□□ -0.89
CLDN4-202ENST00000431918 FRZBQ92765 325 aa9.5□□□□□ -0.89
CLDN4-202ENST00000431918 ACY3Q96HD9 319 aa9.5□□□□□ -0.89
CLDN4-202ENST00000431918 FAM215AQ9Y5M1 114 aa9.5□□□□□ -0.89
CLDN4-202ENST00000431918 H7BYZ3 331 aa9.5□□□□□ -0.89
CLDN4-202ENST00000431918 RAB29O14966 203 aa9.5□□□□□ -0.89
CLDN4-202ENST00000431918 HRASP01112 189 aa9.5□□□□□ -0.89
CLDN4-202ENST00000431918 PAX9P55771 341 aa9.5□□□□□ -0.89
CLDN4-202ENST00000431918 PRR30Q53SZ7 412 aaPredicted RBP9.5□□□□□ -0.89
CLDN4-202ENST00000431918 SPRNQ5BIV9 151 aa9.5□□□□□ -0.89
CLDN4-202ENST00000431918 STUMQ69YW2 141 aa9.5□□□□□ -0.89
CLDN4-202ENST00000431918 ZNF343Q6P1L6 599 aa9.5□□□□□ -0.89
CLDN4-202ENST00000431918 DUX4L9Q6RFH8 374 aaPredicted RBP9.5□□□□□ -0.89
CLDN4-202ENST00000431918 CHD8Q9HCK8 2581 aa9.5□□□□□ -0.89
CLDN4-202ENST00000431918 A8MWP6 167 aa9.5□□□□□ -0.89
CLDN4-202ENST00000431918 SOD3P08294 240 aa9.5□□□□□ -0.89
CLDN4-202ENST00000431918 C10orf91Q5T1B1 145 aa9.5□□□□□ -0.89
CLDN4-202ENST00000431918 PRSS33Q8NF86 280 aa9.5□□□□□ -0.89
CLDN4-202ENST00000431918 JPT1Q9UK76 154 aa9.5□□□□□ -0.89
CLDN4-202ENST00000431918 RPH3ALQ9UNE2 315 aa9.5□□□□□ -0.89
CLDN4-202ENST00000431918 FRYQ5TBA9 3013 aa9.49□□□□□ -0.89
CLDN4-202ENST00000431918 IGHV3-72A0A0B4J1Y9 119 aa9.49□□□□□ -0.89
CLDN4-202ENST00000431918 A8MXE2 369 aa9.49□□□□□ -0.89
CLDN4-202ENST00000431918 GNB1P62873 340 aa9.49□□□□□ -0.89
CLDN4-202ENST00000431918 SERF2P84101 59 aa9.49□□□□□ -0.89
CLDN4-202ENST00000431918 ATP6V1FQ16864 119 aa9.49□□□□□ -0.89
CLDN4-202ENST00000431918 MORN2Q502X0 79 aa9.49□□□□□ -0.89
CLDN4-202ENST00000431918 C11orf53Q8IXP5 236 aa9.49□□□□□ -0.89
CLDN4-202ENST00000431918 C1orf174Q8IYL3 243 aa9.49□□□□□ -0.89
CLDN4-202ENST00000431918 A0A1W2PPQ1 181 aa9.49□□□□□ -0.89
CLDN4-202ENST00000431918 CD1BP29016 333 aa9.49□□□□□ -0.89
CLDN4-202ENST00000431918 MBNL2Q5VZF2 373 aaKnown RBP9.49□□□□□ -0.89
CLDN4-202ENST00000431918 SNRNP40Q96DI7 357 aaKnown RBP9.49□□□□□ -0.89
CLDN4-202ENST00000431918 TNRC6BQ9UPQ9 1833 aaKnown RBP9.49□□□□□ -0.89
CLDN4-202ENST00000431918 PPIAL4EA0A075B759 164 aa9.49□□□□□ -0.89
CLDN4-202ENST00000431918 PPIAL4DF5H284 164 aa9.49□□□□□ -0.89
CLDN4-202ENST00000431918 MT-CO2P00403 227 aa9.49□□□□□ -0.89
CLDN4-202ENST00000431918 IGHV1-46P01743 117 aa9.49□□□□□ -0.89
CLDN4-202ENST00000431918 PPIAL4FP0DN26 164 aa9.49□□□□□ -0.89
CLDN4-202ENST00000431918 COX7A1P24310 79 aa9.49□□□□□ -0.89
CLDN4-202ENST00000431918 SNHG12Q9BXW3 62 aa9.49□□□□□ -0.89
CLDN4-202ENST00000431918 TUBA4BQ9H853 241 aa9.49□□□□□ -0.89
CLDN4-202ENST00000431918 VAX2Q9UIW0 290 aa9.49□□□□□ -0.89
CLDN4-202ENST00000431918 RALYQ9UKM9 306 aaKnown RBP9.49□□□□□ -0.89
CLDN4-202ENST00000431918 PPIAL4AQ9Y536 164 aa9.49□□□□□ -0.89
CLDN4-202ENST00000431918 PCSK5Q92824 1860 aa9.48□□□□□ -0.89
CLDN4-202ENST00000431918 FAM90A26D6RGX4 464 aa9.48□□□□□ -0.89
CLDN4-202ENST00000431918 OR7C2O60412 319 aa9.48□□□□□ -0.89
CLDN4-202ENST00000431918 LINC00614P0C842 121 aa9.48□□□□□ -0.89
CLDN4-202ENST00000431918 CCL3L1P16619 93 aa9.48□□□□□ -0.89
CLDN4-202ENST00000431918 SEM1Q6ZVN7 128 aa9.48□□□□□ -0.89
CLDN4-202ENST00000431918 FAM90A1Q86YD7 464 aa9.48□□□□□ -0.89
CLDN4-202ENST00000431918 DOLPP1Q86YN1 238 aa9.48□□□□□ -0.89
CLDN4-202ENST00000431918 SPACA3Q8IXA5 215 aa9.48□□□□□ -0.89
CLDN4-202ENST00000431918 ZNF664Q8N3J9 261 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms