RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 TIMM13Q9Y5L4 95 aaPredicted RBP4.5□□□□□ -1.69
PTPN4-203ENST00000430976 HEATR5BQ9P2D3 2071 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.5□□□□□ -1.69
PTPN4-203ENST00000430976 A0A0A0MQY5 61 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 KNCNA6PVL3 124 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 SLC25A5P05141 298 aaKnown RBP4.5□□□□□ -1.69
PTPN4-203ENST00000430976 FKBP1AP62942 108 aaKnown RBP4.5□□□□□ -1.69
PTPN4-203ENST00000430976 LEG1Q6P5S2 330 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 C20orf196Q8IYI0 205 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 OLIG1Q8TAK6 271 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 CKLFQ9UBR5 152 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 CACNG5Q9UF02 275 aa4.5□□□□□ -1.69
PTPN4-203ENST00000430976 COL22A1Q8NFW1 1626 aaPredicted RBP4.5□□□□□ -1.69
PTPN4-203ENST00000430976 UNC13BO14795 1591 aa4.49□□□□□ -1.69
PTPN4-203ENST00000430976 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.49□□□□□ -1.69
PTPN4-203ENST00000430976 MYO5AQ9Y4I1 1855 aaKnown RBP4.49□□□□□ -1.69
PTPN4-203ENST00000430976 HEATR5AQ86XA9 2040 aa4.49□□□□□ -1.69
PTPN4-203ENST00000430976 TRBV4-1A0A0J9YWV2 114 aa4.49□□□□□ -1.69
PTPN4-203ENST00000430976 SMIM13P0DJ93 91 aa4.49□□□□□ -1.69
PTPN4-203ENST00000430976 RND3P61587 244 aa4.49□□□□□ -1.69
PTPN4-203ENST00000430976 SNRPFP62306 86 aaKnown RBP4.49□□□□□ -1.69
PTPN4-203ENST00000430976 SEC11AP67812 179 aa4.49□□□□□ -1.69
PTPN4-203ENST00000430976 KIR3DS1Q14943 382 aa4.49□□□□□ -1.69
PTPN4-203ENST00000430976 RFLNAQ6ZTI6 216 aa4.49□□□□□ -1.69
PTPN4-203ENST00000430976 ADOQ96SZ5 270 aa4.49□□□□□ -1.69
PTPN4-203ENST00000430976 C11orf68Q9H3H3 251 aaKnown RBP4.49□□□□□ -1.69
PTPN4-203ENST00000430976 TAAR3PQ9P1P4 343 aa4.49□□□□□ -1.69
PTPN4-203ENST00000430976 A0A087WUU8 490 aa4.49□□□□□ -1.69
PTPN4-203ENST00000430976 ZFP92A6NM28 416 aa4.49□□□□□ -1.69
PTPN4-203ENST00000430976 SNRPGP15A8MWD9 76 aa4.49□□□□□ -1.69
PTPN4-203ENST00000430976 FCGR3AP08637 254 aa4.49□□□□□ -1.69
PTPN4-203ENST00000430976 DLX1P56177 255 aa4.49□□□□□ -1.69
PTPN4-203ENST00000430976 UBE2G1P62253 170 aa4.49□□□□□ -1.69
PTPN4-203ENST00000430976 TCF15Q12870 199 aa4.49□□□□□ -1.69
PTPN4-203ENST00000430976 ASPHD1Q5U4P2 390 aa4.49□□□□□ -1.69
PTPN4-203ENST00000430976 TRNP1Q6NT89 227 aa4.49□□□□□ -1.69
PTPN4-203ENST00000430976 ZNF740Q8NDX6 193 aa4.49□□□□□ -1.69
PTPN4-203ENST00000430976 OR8B3Q8NGG8 313 aa4.49□□□□□ -1.69
PTPN4-203ENST00000430976 S1PR3Q99500 378 aa4.49□□□□□ -1.69
PTPN4-203ENST00000430976 CHST6Q9GZX3 395 aa4.49□□□□□ -1.69
PTPN4-203ENST00000430976 VSIRQ9H7M9 311 aa4.49□□□□□ -1.69
PTPN4-203ENST00000430976 TPSG1Q9NRR2 321 aa4.49□□□□□ -1.69
PTPN4-203ENST00000430976 CES1P1Q9UKY3 287 aa4.49□□□□□ -1.69
PTPN4-203ENST00000430976 XRN1Q8IZH2 1706 aaKnown RBP4.49□□□□□ -1.69
PTPN4-203ENST00000430976 BRWD3Q6RI45 1802 aa4.49□□□□□ -1.69
PTPN4-203ENST00000430976 A0A087WV48 116 aa4.49□□□□□ -1.69
PTPN4-203ENST00000430976 SPINT3P49223 89 aa4.49□□□□□ -1.69
PTPN4-203ENST00000430976 FOXF2Q12947 444 aa4.49□□□□□ -1.69
PTPN4-203ENST00000430976 SPANXN4Q5MJ08 99 aa4.49□□□□□ -1.69
PTPN4-203ENST00000430976 PLPP4Q5VZY2 271 aa4.49□□□□□ -1.69
PTPN4-203ENST00000430976 Q6ZWC4 215 aa4.49□□□□□ -1.69
PTPN4-203ENST00000430976 APRG1Q8IVJ8 170 aa4.49□□□□□ -1.69
PTPN4-203ENST00000430976 Q8TCH9 128 aa4.49□□□□□ -1.69
PTPN4-203ENST00000430976 FMC1Q96HJ9 113 aa4.49□□□□□ -1.69
PTPN4-203ENST00000430976 SLC39A9Q9NUM3 307 aa4.49□□□□□ -1.69
PTPN4-203ENST00000430976 TRPM1Q7Z4N2 1603 aa4.49□□□□□ -1.69
PTPN4-203ENST00000430976 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.48□□□□□ -1.69
PTPN4-203ENST00000430976 A0A1W2PNR3 127 aa4.48□□□□□ -1.69
PTPN4-203ENST00000430976 ZNF43P17038 809 aa4.48□□□□□ -1.69
PTPN4-203ENST00000430976 SFTPDP35247 375 aa4.48□□□□□ -1.69
PTPN4-203ENST00000430976 VEGFBP49765 207 aa4.48□□□□□ -1.69
PTPN4-203ENST00000430976 CDSNQ15517 529 aa4.48□□□□□ -1.69
PTPN4-203ENST00000430976 ZNF718Q3SXZ3 478 aa4.48□□□□□ -1.69
PTPN4-203ENST00000430976 TRAPPC6BQ86SZ2 158 aa4.48□□□□□ -1.69
PTPN4-203ENST00000430976 NPWQ8N729 165 aa4.48□□□□□ -1.69
PTPN4-203ENST00000430976 EMC6Q9BV81 110 aa4.48□□□□□ -1.69
PTPN4-203ENST00000430976 SAP30LQ9HAJ7 183 aa4.48□□□□□ -1.69
PTPN4-203ENST00000430976 TP53TG1Q9Y2A0 90 aa4.48□□□□□ -1.69
PTPN4-203ENST00000430976 SPHKAPQ2M3C7 1700 aa4.48□□□□□ -1.69
PTPN4-203ENST00000430976 TRAV9-2A0A087WT02 112 aa4.48□□□□□ -1.69
PTPN4-203ENST00000430976 A0A1W2PPM0 123 aa4.48□□□□□ -1.69
PTPN4-203ENST00000430976 MSGN1A6NI15 193 aa4.48□□□□□ -1.69
PTPN4-203ENST00000430976 ZNF736B4DX44 427 aaPredicted RBP4.48□□□□□ -1.69
PTPN4-203ENST00000430976 H3BMG7 143 aa4.48□□□□□ -1.69
PTPN4-203ENST00000430976 SERF1AO75920 110 aa4.48□□□□□ -1.69
PTPN4-203ENST00000430976 SOD1P00441 154 aa4.48□□□□□ -1.69
PTPN4-203ENST00000430976 INSL3P51460 131 aa4.48□□□□□ -1.69
PTPN4-203ENST00000430976 EEF1DP3Q658K8 133 aa4.48□□□□□ -1.69
PTPN4-203ENST00000430976 CYB561D1Q8N8Q1 229 aa4.48□□□□□ -1.69
PTPN4-203ENST00000430976 TM2D2Q9BX73 214 aa4.48□□□□□ -1.69
PTPN4-203ENST00000430976 TM2D1Q9BX74 207 aa4.48□□□□□ -1.69
PTPN4-203ENST00000430976 AAMDCQ9H7C9 122 aa4.48□□□□□ -1.69
PTPN4-203ENST00000430976 PRDM6Q9NQX0 595 aa4.48□□□□□ -1.69
PTPN4-203ENST00000430976 SDK2Q58EX2 2172 aa4.48□□□□□ -1.69
PTPN4-203ENST00000430976 A0A0A6YYD5 115 aa4.48□□□□□ -1.69
PTPN4-203ENST00000430976 LOC107984156A0A0G2JMH3 177 aa4.48□□□□□ -1.69
PTPN4-203ENST00000430976 J3QQQ9 107 aa4.48□□□□□ -1.69
PTPN4-203ENST00000430976 FGF1P05230 155 aa4.48□□□□□ -1.69
PTPN4-203ENST00000430976 S100A3P33764 101 aa4.48□□□□□ -1.69
PTPN4-203ENST00000430976 ATP5G3P48201 142 aa4.48□□□□□ -1.69
PTPN4-203ENST00000430976 C6orf201Q7Z4U5 140 aa4.48□□□□□ -1.69
PTPN4-203ENST00000430976 ARL17AQ8IVW1 177 aa4.48□□□□□ -1.69
PTPN4-203ENST00000430976 SGPP2Q8IWX5 399 aa4.48□□□□□ -1.69
PTPN4-203ENST00000430976 PIANPQ8IYJ0 282 aa4.48□□□□□ -1.69
PTPN4-203ENST00000430976 ZNRF2Q8NHG8 242 aa4.48□□□□□ -1.69
PTPN4-203ENST00000430976 CRYGNQ8WXF5 182 aa4.48□□□□□ -1.69
PTPN4-203ENST00000430976 PRRC2BQ5JSZ5 2229 aaKnown RBP4.48□□□□□ -1.69
PTPN4-203ENST00000430976 IFT172Q9UG01 1749 aa4.48□□□□□ -1.69
PTPN4-203ENST00000430976 E9PLN8 166 aa4.47□□□□□ -1.69
PTPN4-203ENST00000430976 F8W1H4 67 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms