RNA–Protein interactions for RNA: ENST00000428404.5

TRIM39-207, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-207ENST00000428404 HNF1AP20823 631 aa9.98□□□□□ -0.81
TRIM39-207ENST00000428404 SRP14P37108 136 aaKnown RBP9.98□□□□□ -0.81
TRIM39-207ENST00000428404 IER3P46695 156 aa9.98□□□□□ -0.81
TRIM39-207ENST00000428404 RELBQ01201 579 aa9.98□□□□□ -0.81
TRIM39-207ENST00000428404 SMCO1Q147U7 214 aa9.98□□□□□ -0.81
TRIM39-207ENST00000428404 IAH1Q2TAA2 248 aaPredicted RBP9.98□□□□□ -0.81
TRIM39-207ENST00000428404 Q6YL49 198 aa9.98□□□□□ -0.81
TRIM39-207ENST00000428404 ZBTB8BQ8NAP8 495 aaPredicted RBP9.98□□□□□ -0.81
TRIM39-207ENST00000428404 OR8H1Q8NGG4 311 aa9.98□□□□□ -0.81
TRIM39-207ENST00000428404 OR4D5Q8NGN0 318 aa9.98□□□□□ -0.81
TRIM39-207ENST00000428404 OR4A5Q8NH83 315 aa9.98□□□□□ -0.81
TRIM39-207ENST00000428404 TMEM167AQ8TBQ9 72 aa9.98□□□□□ -0.81
TRIM39-207ENST00000428404 C22orf15Q8WYQ4 148 aa9.98□□□□□ -0.81
TRIM39-207ENST00000428404 SPIN2AQ99865 258 aa9.98□□□□□ -0.81
TRIM39-207ENST00000428404 SPIN2BQ9BPZ2 258 aa9.98□□□□□ -0.81
TRIM39-207ENST00000428404 NMES1Q9C002 83 aa9.98□□□□□ -0.81
TRIM39-207ENST00000428404 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.98□□□□□ -0.81
TRIM39-207ENST00000428404 CACNG5Q9UF02 275 aa9.98□□□□□ -0.81
TRIM39-207ENST00000428404 SIGLEC9Q9Y336 463 aa9.98□□□□□ -0.81
TRIM39-207ENST00000428404 TNCP24821 2201 aa9.97□□□□□ -0.81
TRIM39-207ENST00000428404 RRHO14718 337 aa9.97□□□□□ -0.81
TRIM39-207ENST00000428404 NBR2O15453 112 aa9.97□□□□□ -0.81
TRIM39-207ENST00000428404 SLC25A17O43808 307 aa9.97□□□□□ -0.81
TRIM39-207ENST00000428404 CCNKO75909 580 aa9.97□□□□□ -0.81
TRIM39-207ENST00000428404 KBTBD11O94819 623 aa9.97□□□□□ -0.81
TRIM39-207ENST00000428404 TMEM11P17152 192 aa9.97□□□□□ -0.81
TRIM39-207ENST00000428404 RAP2BP61225 183 aa9.97□□□□□ -0.81
TRIM39-207ENST00000428404 CYCSP99999 105 aaKnown RBP9.97□□□□□ -0.81
TRIM39-207ENST00000428404 CD83Q01151 205 aa9.97□□□□□ -0.81
TRIM39-207ENST00000428404 HES1Q14469 280 aa9.97□□□□□ -0.81
TRIM39-207ENST00000428404 VMA21Q3ZAQ7 101 aa9.97□□□□□ -0.81
TRIM39-207ENST00000428404 FOXRED2Q8IWF2 684 aa9.97□□□□□ -0.81
TRIM39-207ENST00000428404 RNASE11Q8TAA1 199 aaKnown RBP9.97□□□□□ -0.81
TRIM39-207ENST00000428404 VSTM2AQ8TAG5 236 aa9.97□□□□□ -0.81
TRIM39-207ENST00000428404 FYTTD1Q96QD9 318 aaKnown RBP9.97□□□□□ -0.81
TRIM39-207ENST00000428404 GSX1Q9H4S2 264 aaPredicted RBP9.97□□□□□ -0.81
TRIM39-207ENST00000428404 RANBP3Q9H6Z4 567 aaPredicted RBP9.97□□□□□ -0.81
TRIM39-207ENST00000428404 TMEM14BQ9NUH8 114 aa9.97□□□□□ -0.81
TRIM39-207ENST00000428404 TCF19Q9Y242 345 aa9.97□□□□□ -0.81
TRIM39-207ENST00000428404 H3BUX3 64 aa9.96□□□□□ -0.82
TRIM39-207ENST00000428404 IGHV4-59P01825 116 aa9.96□□□□□ -0.82
TRIM39-207ENST00000428404 ID3Q02535 119 aa9.96□□□□□ -0.82
TRIM39-207ENST00000428404 MMDQ15546 238 aa9.96□□□□□ -0.82
TRIM39-207ENST00000428404 C5orf64Q2M2E5 130 aa9.96□□□□□ -0.82
TRIM39-207ENST00000428404 PDLIM3Q53GG5 364 aaPredicted RBP9.96□□□□□ -0.82
TRIM39-207ENST00000428404 CXorf66Q5JRM2 361 aaPredicted RBP9.96□□□□□ -0.82
TRIM39-207ENST00000428404 THOC7Q6I9Y2 204 aaKnown RBP9.96□□□□□ -0.82
TRIM39-207ENST00000428404 AKAP14Q86UN6 197 aa9.96□□□□□ -0.82
TRIM39-207ENST00000428404 ZNF429Q86V71 674 aa9.96□□□□□ -0.82
TRIM39-207ENST00000428404 FAM71E2Q8N5Q1 922 aa9.96□□□□□ -0.82
TRIM39-207ENST00000428404 OR5R1Q8NH85 324 aa9.96□□□□□ -0.82
TRIM39-207ENST00000428404 RBM14Q96PK6 669 aaKnown RBP9.96□□□□□ -0.82
TRIM39-207ENST00000428404 CHIAQ9BZP6 476 aa9.96□□□□□ -0.82
TRIM39-207ENST00000428404 RANGRFQ9HD47 186 aaPredicted RBP9.96□□□□□ -0.82
TRIM39-207ENST00000428404 TPSG1Q9NRR2 321 aa9.96□□□□□ -0.82
TRIM39-207ENST00000428404 GSKIPQ9P0R6 139 aa9.96□□□□□ -0.82
TRIM39-207ENST00000428404 CDC42EP3Q9UKI2 254 aa9.96□□□□□ -0.82
TRIM39-207ENST00000428404 FOXA2Q9Y261 457 aaPredicted RBP9.96□□□□□ -0.82
TRIM39-207ENST00000428404 NSG2Q9Y328 171 aa9.96□□□□□ -0.82
TRIM39-207ENST00000428404 C15orf61A6NNL5 157 aa9.95□□□□□ -0.82
TRIM39-207ENST00000428404 FAM90A26D6RGX4 464 aa9.95□□□□□ -0.82
TRIM39-207ENST00000428404 G3V3Q6 166 aa9.95□□□□□ -0.82
TRIM39-207ENST00000428404 FCN1O00602 326 aa9.95□□□□□ -0.82
TRIM39-207ENST00000428404 SNAPC5O75971 98 aa9.95□□□□□ -0.82
TRIM39-207ENST00000428404 OR2F2O95006 317 aa9.95□□□□□ -0.82
TRIM39-207ENST00000428404 MBPP02686 304 aaPredicted RBP9.95□□□□□ -0.82
TRIM39-207ENST00000428404 CD300CQ08708 224 aa9.95□□□□□ -0.82
TRIM39-207ENST00000428404 PJVKQ0ZLH3 352 aa9.95□□□□□ -0.82
TRIM39-207ENST00000428404 PRSS8Q16651 343 aa9.95□□□□□ -0.82
TRIM39-207ENST00000428404 Q5BKY6 102 aa9.95□□□□□ -0.82
TRIM39-207ENST00000428404 PPP1R27Q86WC6 154 aa9.95□□□□□ -0.82
TRIM39-207ENST00000428404 TCTE3Q8IZS6 198 aa9.95□□□□□ -0.82
TRIM39-207ENST00000428404 SIGLECL1Q8N7X8 197 aa9.95□□□□□ -0.82
TRIM39-207ENST00000428404 Q8N9W7 124 aa9.95□□□□□ -0.82
TRIM39-207ENST00000428404 OR52E5Q8NH55 327 aa9.95□□□□□ -0.82
TRIM39-207ENST00000428404 OR4A16Q8NH70 328 aa9.95□□□□□ -0.82
TRIM39-207ENST00000428404 PPP1R1CQ8WVI7 109 aa9.95□□□□□ -0.82
TRIM39-207ENST00000428404 SSMEM1Q8WWF3 244 aa9.95□□□□□ -0.82
TRIM39-207ENST00000428404 ZDHHC16Q969W1 377 aa9.95□□□□□ -0.82
TRIM39-207ENST00000428404 PDCD10Q9BUL8 212 aa9.95□□□□□ -0.82
TRIM39-207ENST00000428404 QTRT1Q9BXR0 403 aaKnown RBP9.95□□□□□ -0.82
TRIM39-207ENST00000428404 FBXL15Q9H469 300 aa9.95□□□□□ -0.82
TRIM39-207ENST00000428404 ZNF430Q9H8G1 570 aaPredicted RBP9.95□□□□□ -0.82
TRIM39-207ENST00000428404 C1RLQ9NZP8 487 aa9.95□□□□□ -0.82
TRIM39-207ENST00000428404 METTL1Q9UBP6 276 aaKnown RBP9.95□□□□□ -0.82
TRIM39-207ENST00000428404 HSPB7Q9UBY9 170 aa9.95□□□□□ -0.82
TRIM39-207ENST00000428404 CACFD1Q9UGQ2 172 aa9.95□□□□□ -0.82
TRIM39-207ENST00000428404 PRNDQ9UKY0 176 aa9.95□□□□□ -0.82
TRIM39-207ENST00000428404 ST8SIA3O43173 380 aa9.94□□□□□ -0.82
TRIM39-207ENST00000428404 AMY1AP04745 511 aa9.94□□□□□ -0.82
TRIM39-207ENST00000428404 MAS1LP35410 378 aa9.94□□□□□ -0.82
TRIM39-207ENST00000428404 NKX2-1P43699 371 aaPredicted RBP9.94□□□□□ -0.82
TRIM39-207ENST00000428404 HSPE1P61604 102 aaKnown RBP9.94□□□□□ -0.82
TRIM39-207ENST00000428404 RPL8P62917 257 aaKnown RBP9.94□□□□□ -0.82
TRIM39-207ENST00000428404 SSBP2P81877 361 aaPredicted RBP9.94□□□□□ -0.82
TRIM39-207ENST00000428404 TNFRSF9Q07011 255 aa9.94□□□□□ -0.82
TRIM39-207ENST00000428404 MMD2Q8IY49 270 aa9.94□□□□□ -0.82
TRIM39-207ENST00000428404 OR1S1Q8NH92 325 aa9.94□□□□□ -0.82
TRIM39-207ENST00000428404 SLC25A33Q9BSK2 321 aa9.94□□□□□ -0.82
TRIM39-207ENST00000428404 FKBP11Q9NYL4 201 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms