RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 C12orf77C9JDV5 145 aa8.23□□□□□ -1.09
SNX13-203ENST00000428135 HKR1P10072 659 aa8.23□□□□□ -1.09
SNX13-203ENST00000428135 HSPE1P61604 102 aaKnown RBP8.23□□□□□ -1.09
SNX13-203ENST00000428135 CX3CL1P78423 397 aa8.23□□□□□ -1.09
SNX13-203ENST00000428135 TNFRSF9Q07011 255 aa8.23□□□□□ -1.09
SNX13-203ENST00000428135 GLMPQ8WWB7 406 aa8.23□□□□□ -1.09
SNX13-203ENST00000428135 EEF1AKMT3Q96AZ1 226 aa8.23□□□□□ -1.09
SNX13-203ENST00000428135 C17orf100A8MU93 164 aa8.23□□□□□ -1.09
SNX13-203ENST00000428135 NPPCP23582 126 aa8.23□□□□□ -1.09
SNX13-203ENST00000428135 MYOZ3Q8TDC0 251 aa8.23□□□□□ -1.09
SNX13-203ENST00000428135 RAX2Q96IS3 184 aa8.23□□□□□ -1.09
SNX13-203ENST00000428135 LINC00470Q9BZP3 86 aa8.23□□□□□ -1.09
SNX13-203ENST00000428135 FOXD3Q9UJU5 478 aaPredicted RBP8.23□□□□□ -1.09
SNX13-203ENST00000428135 PHLDA3Q9Y5J5 127 aa8.23□□□□□ -1.09
SNX13-203ENST00000428135 H7C2G1 150 aa8.22□□□□□ -1.09
SNX13-203ENST00000428135 LY6HO94772 140 aa8.22□□□□□ -1.09
SNX13-203ENST00000428135 RNASE1P07998 156 aaKnown RBP8.22□□□□□ -1.09
SNX13-203ENST00000428135 SRD5A1P18405 259 aa8.22□□□□□ -1.09
SNX13-203ENST00000428135 KIR3DL3Q8N743 410 aa8.22□□□□□ -1.09
SNX13-203ENST00000428135 MRPL20Q9BYC9 149 aaKnown RBP8.22□□□□□ -1.09
SNX13-203ENST00000428135 PPP1R3EQ9H7J1 279 aa8.22□□□□□ -1.09
SNX13-203ENST00000428135 PRB1P04280 392 aa8.22□□□□□ -1.09
SNX13-203ENST00000428135 COX5BP10606 129 aa8.22□□□□□ -1.09
SNX13-203ENST00000428135 ZNF250P15622 560 aa8.22□□□□□ -1.09
SNX13-203ENST00000428135 KIR2DL2P43627 348 aaPredicted RBP8.22□□□□□ -1.09
SNX13-203ENST00000428135 COLCA1Q6ZS62 124 aa8.22□□□□□ -1.09
SNX13-203ENST00000428135 BPIFA4PQ86YQ2 179 aa8.22□□□□□ -1.09
SNX13-203ENST00000428135 FLVCR1-AS1Q8TAF5 88 aa8.22□□□□□ -1.09
SNX13-203ENST00000428135 TMEM186Q96B77 213 aa8.22□□□□□ -1.09
SNX13-203ENST00000428135 C7orf77A4D0Y5 90 aa8.22□□□□□ -1.09
SNX13-203ENST00000428135 IFNL4K9M1U5 179 aa8.22□□□□□ -1.09
SNX13-203ENST00000428135 SLC16A13Q7RTY0 426 aa8.22□□□□□ -1.09
SNX13-203ENST00000428135 LHFPL4Q7Z7J7 247 aa8.22□□□□□ -1.09
SNX13-203ENST00000428135 TICRRQ7Z2Z1 1910 aa8.22□□□□□ -1.09
SNX13-203ENST00000428135 RRHO14718 337 aa8.22□□□□□ -1.09
SNX13-203ENST00000428135 PRR30Q53SZ7 412 aaPredicted RBP8.22□□□□□ -1.09
SNX13-203ENST00000428135 WDR73Q6P4I2 378 aa8.22□□□□□ -1.09
SNX13-203ENST00000428135 TMEM45BQ96B21 275 aa8.22□□□□□ -1.09
SNX13-203ENST00000428135 PHYHIPLQ96FC7 376 aa8.22□□□□□ -1.09
SNX13-203ENST00000428135 RARRES2Q99969 163 aa8.22□□□□□ -1.09
SNX13-203ENST00000428135 ZNF324O75467 553 aaPredicted RBP8.22□□□□□ -1.09
SNX13-203ENST00000428135 CA2P00918 260 aa8.22□□□□□ -1.09
SNX13-203ENST00000428135 MAPK1IP1LQ8NDC0 245 aa8.22□□□□□ -1.09
SNX13-203ENST00000428135 TNFSF18Q9UNG2 199 aa8.22□□□□□ -1.09
SNX13-203ENST00000428135 TMEM218A2RU14 115 aa8.21□□□□□ -1.09
SNX13-203ENST00000428135 NTN3O00634 580 aaPredicted RBP8.21□□□□□ -1.09
SNX13-203ENST00000428135 CCKARP32238 428 aa8.21□□□□□ -1.09
SNX13-203ENST00000428135 C1orf100Q5SVJ3 147 aa8.21□□□□□ -1.09
SNX13-203ENST00000428135 DPPA3Q6W0C5 159 aa8.21□□□□□ -1.09
SNX13-203ENST00000428135 GOLT1AQ6ZVE7 132 aa8.21□□□□□ -1.09
SNX13-203ENST00000428135 LSM10Q969L4 123 aaKnown RBP8.21□□□□□ -1.09
SNX13-203ENST00000428135 DPM3Q9P2X0 92 aa8.21□□□□□ -1.09
SNX13-203ENST00000428135 FBXL7Q9UJT9 491 aa8.21□□□□□ -1.09
SNX13-203ENST00000428135 ABCA4P78363 2273 aa8.21□□□□□ -1.09
SNX13-203ENST00000428135 C17orf98A8MV24 154 aa8.21□□□□□ -1.09
SNX13-203ENST00000428135 CRYBB3P26998 211 aa8.21□□□□□ -1.09
SNX13-203ENST00000428135 SRSF9Q13242 221 aaKnown RBP eCLIP8.21□□□□□ -1.09
SNX13-203ENST00000428135 WDR25Q64LD2 544 aaPredicted RBP8.21□□□□□ -1.09
SNX13-203ENST00000428135 EIF4E3Q8N5X7 224 aaKnown RBP8.21□□□□□ -1.09
SNX13-203ENST00000428135 TAF15Q92804 592 aaKnown RBP eCLIP8.21□□□□□ -1.09
SNX13-203ENST00000428135 VPS25Q9BRG1 176 aa8.21□□□□□ -1.09
SNX13-203ENST00000428135 MAP1LC3CQ9BXW4 147 aa8.21□□□□□ -1.09
SNX13-203ENST00000428135 SEMA5BQ9P283 1151 aa8.21□□□□□ -1.09
SNX13-203ENST00000428135 ZNF107Q9UII5 783 aaPredicted RBP8.21□□□□□ -1.09
SNX13-203ENST00000428135 TRAV40A0A0B4J280 105 aa8.21□□□□□ -1.1
SNX13-203ENST00000428135 M0R3E3 92 aa8.21□□□□□ -1.1
SNX13-203ENST00000428135 GCSHP23434 173 aa8.21□□□□□ -1.1
SNX13-203ENST00000428135 GATA2P23769 480 aaPredicted RBP8.21□□□□□ -1.1
SNX13-203ENST00000428135 FHITP49789 147 aa8.21□□□□□ -1.1
SNX13-203ENST00000428135 TCF15Q12870 199 aa8.21□□□□□ -1.1
SNX13-203ENST00000428135 DHRS11Q6UWP2 260 aa8.21□□□□□ -1.1
SNX13-203ENST00000428135 DNM1P46Q6ZS02 220 aa8.21□□□□□ -1.1
SNX13-203ENST00000428135 SGMS2Q8NHU3 365 aa8.21□□□□□ -1.1
SNX13-203ENST00000428135 NEU4Q8WWR8 484 aaPredicted RBP8.21□□□□□ -1.1
SNX13-203ENST00000428135 IGHV1-18A0A0C4DH31 117 aa8.21□□□□□ -1.1
SNX13-203ENST00000428135 C5orf52A6NGY3 159 aa8.21□□□□□ -1.1
SNX13-203ENST00000428135 FAM53AQ6NSI3 398 aaPredicted RBP8.21□□□□□ -1.1
SNX13-203ENST00000428135 OR1N2Q8NGR9 330 aa8.21□□□□□ -1.1
SNX13-203ENST00000428135 DNAJC4Q9NNZ3 241 aa8.21□□□□□ -1.1
SNX13-203ENST00000428135 RALGAPA2Q2PPJ7 1873 aa8.21□□□□□ -1.1
SNX13-203ENST00000428135 KBTBD11O94819 623 aa8.21□□□□□ -1.1
SNX13-203ENST00000428135 MUC1P15941 1255 aaPredicted RBP8.21□□□□□ -1.1
SNX13-203ENST00000428135 OTX1P32242 354 aaPredicted RBP8.21□□□□□ -1.1
SNX13-203ENST00000428135 DLX1P56177 255 aa8.21□□□□□ -1.1
SNX13-203ENST00000428135 RELQ04864 619 aaPredicted RBP8.21□□□□□ -1.1
SNX13-203ENST00000428135 ZNF56Q15929 161 aa8.21□□□□□ -1.1
SNX13-203ENST00000428135 SRSF12Q8WXF0 261 aaKnown RBP8.21□□□□□ -1.1
SNX13-203ENST00000428135 ANAPC16Q96DE5 110 aa8.21□□□□□ -1.1
SNX13-203ENST00000428135 WFIKKN1Q96NZ8 548 aa8.21□□□□□ -1.1
SNX13-203ENST00000428135 IQCJQ1A5X6 159 aa8.2□□□□□ -1.1
SNX13-203ENST00000428135 C1QTNF12Q5T7M4 302 aa8.2□□□□□ -1.1
SNX13-203ENST00000428135 ZNF343Q6P1L6 599 aa8.2□□□□□ -1.1
SNX13-203ENST00000428135 LINC00305Q7Z4B0 112 aa8.2□□□□□ -1.1
SNX13-203ENST00000428135 PPP1R27Q86WC6 154 aa8.2□□□□□ -1.1
SNX13-203ENST00000428135 GTF3AQ92664 365 aaKnown RBP8.2□□□□□ -1.1
SNX13-203ENST00000428135 GSX1Q9H4S2 264 aaPredicted RBP8.2□□□□□ -1.1
SNX13-203ENST00000428135 DOCK4Q8N1I0 1966 aa8.2□□□□□ -1.1
SNX13-203ENST00000428135 CACNA1DQ01668 2161 aa8.2□□□□□ -1.1
SNX13-203ENST00000428135 PSMB11A5LHX3 300 aa8.2□□□□□ -1.1
SNX13-203ENST00000428135 PGA5P0DJD9 388 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms