RNA–Protein interactions for RNA: ENST00000427645.5

SMARCAL1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-206ENST00000427645 HILPDAQ9Y5L2 63 aa6.65□□□□□ -1.34
SMARCAL1-206ENST00000427645 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.65□□□□□ -1.35
SMARCAL1-206ENST00000427645 A0A1W2PPI3 338 aa6.64□□□□□ -1.35
SMARCAL1-206ENST00000427645 A0A1W2PRD5 423 aa6.64□□□□□ -1.35
SMARCAL1-206ENST00000427645 A0A1W2PRF3 423 aa6.64□□□□□ -1.35
SMARCAL1-206ENST00000427645 A0A1W2PRM7 423 aa6.64□□□□□ -1.35
SMARCAL1-206ENST00000427645 MARCH11A6NNE9 402 aa6.64□□□□□ -1.35
SMARCAL1-206ENST00000427645 FAM90A26D6RGX4 464 aa6.64□□□□□ -1.35
SMARCAL1-206ENST00000427645 CCSO14618 274 aa6.64□□□□□ -1.35
SMARCAL1-206ENST00000427645 ST8SIA3O43173 380 aa6.64□□□□□ -1.35
SMARCAL1-206ENST00000427645 TCF21O43680 179 aa6.64□□□□□ -1.35
SMARCAL1-206ENST00000427645 MED6O75586 246 aa6.64□□□□□ -1.35
SMARCAL1-206ENST00000427645 VENTXO95231 258 aa6.64□□□□□ -1.35
SMARCAL1-206ENST00000427645 LY86O95711 162 aa6.64□□□□□ -1.35
SMARCAL1-206ENST00000427645 IGKV1-5P01602 117 aa6.64□□□□□ -1.35
SMARCAL1-206ENST00000427645 C1QBP02746 253 aa6.64□□□□□ -1.35
SMARCAL1-206ENST00000427645 HNRNPCP07910 306 aaKnown RBP eCLIP6.64□□□□□ -1.35
SMARCAL1-206ENST00000427645 FGF2P09038 288 aa6.64□□□□□ -1.35
SMARCAL1-206ENST00000427645 SAA4P35542 130 aa6.64□□□□□ -1.35
SMARCAL1-206ENST00000427645 ID3Q02535 119 aa6.64□□□□□ -1.35
SMARCAL1-206ENST00000427645 PRB3Q04118 309 aaPredicted RBP6.64□□□□□ -1.35
SMARCAL1-206ENST00000427645 IL15RAQ13261 267 aa6.64□□□□□ -1.35
SMARCAL1-206ENST00000427645 EBI3Q14213 229 aa6.64□□□□□ -1.35
SMARCAL1-206ENST00000427645 VMA21Q3ZAQ7 101 aa6.64□□□□□ -1.35
SMARCAL1-206ENST00000427645 ZFP69Q49AA0 526 aa6.64□□□□□ -1.35
SMARCAL1-206ENST00000427645 LHFPL4Q7Z7J7 247 aa6.64□□□□□ -1.35
SMARCAL1-206ENST00000427645 TEX45Q8NA69 505 aa6.64□□□□□ -1.35
SMARCAL1-206ENST00000427645 ZBTB8BQ8NAP8 495 aaPredicted RBP6.64□□□□□ -1.35
SMARCAL1-206ENST00000427645 OR2T35Q8NGX2 323 aa6.64□□□□□ -1.35
SMARCAL1-206ENST00000427645 OR2T10Q8NGZ9 312 aa6.64□□□□□ -1.35
SMARCAL1-206ENST00000427645 OR4A16Q8NH70 328 aa6.64□□□□□ -1.35
SMARCAL1-206ENST00000427645 OR1S1Q8NH92 325 aa6.64□□□□□ -1.35
SMARCAL1-206ENST00000427645 THAP6Q8TBB0 222 aa6.64□□□□□ -1.35
SMARCAL1-206ENST00000427645 FYTTD1Q96QD9 318 aaKnown RBP6.64□□□□□ -1.35
SMARCAL1-206ENST00000427645 BET1LQ9NYM9 111 aa6.64□□□□□ -1.35
SMARCAL1-206ENST00000427645 NUP50Q9UKX7 468 aa6.64□□□□□ -1.35
SMARCAL1-206ENST00000427645 TRAV40A0A0B4J280 105 aa6.63□□□□□ -1.35
SMARCAL1-206ENST00000427645 HMSDA8MTL9 139 aa6.63□□□□□ -1.35
SMARCAL1-206ENST00000427645 MPTX1A8MV57 137 aa6.63□□□□□ -1.35
SMARCAL1-206ENST00000427645 TIMM23O14925 209 aa6.63□□□□□ -1.35
SMARCAL1-206ENST00000427645 PITX3O75364 302 aa6.63□□□□□ -1.35
SMARCAL1-206ENST00000427645 RBMXL2O75526 392 aaKnown RBP6.63□□□□□ -1.35
SMARCAL1-206ENST00000427645 SPDEFO95238 335 aa6.63□□□□□ -1.35
SMARCAL1-206ENST00000427645 MOSP00540 346 aa6.63□□□□□ -1.35
SMARCAL1-206ENST00000427645 IGKV1-16P04430 117 aa6.63□□□□□ -1.35
SMARCAL1-206ENST00000427645 IL6RP08887 468 aaPredicted RBP6.63□□□□□ -1.35
SMARCAL1-206ENST00000427645 FBP1P09467 338 aa6.63□□□□□ -1.35
SMARCAL1-206ENST00000427645 P0C879 139 aa6.63□□□□□ -1.35
SMARCAL1-206ENST00000427645 PVALBP20472 110 aaPredicted RBP6.63□□□□□ -1.35
SMARCAL1-206ENST00000427645 NKX2-1P43699 371 aaPredicted RBP6.63□□□□□ -1.35
SMARCAL1-206ENST00000427645 DYNLT3P51808 116 aa6.63□□□□□ -1.35
SMARCAL1-206ENST00000427645 AANATQ16613 207 aa6.63□□□□□ -1.35
SMARCAL1-206ENST00000427645 ARSJQ5FYB0 599 aaPredicted RBP6.63□□□□□ -1.35
SMARCAL1-206ENST00000427645 LDLRAD2Q5SZI1 272 aa6.63□□□□□ -1.35
SMARCAL1-206ENST00000427645 OR4A47Q6IF82 309 aa6.63□□□□□ -1.35
SMARCAL1-206ENST00000427645 C12orf54Q6X4T0 127 aa6.63□□□□□ -1.35
SMARCAL1-206ENST00000427645 ZNF429Q86V71 674 aa6.63□□□□□ -1.35
SMARCAL1-206ENST00000427645 OR8H1Q8NGG4 311 aa6.63□□□□□ -1.35
SMARCAL1-206ENST00000427645 OR4D5Q8NGN0 318 aa6.63□□□□□ -1.35
SMARCAL1-206ENST00000427645 OR52E5Q8NH55 327 aa6.63□□□□□ -1.35
SMARCAL1-206ENST00000427645 PPP1R1CQ8WVI7 109 aa6.63□□□□□ -1.35
SMARCAL1-206ENST00000427645 CFHR4Q92496 578 aa6.63□□□□□ -1.35
SMARCAL1-206ENST00000427645 HARBI1Q96MB7 349 aa6.63□□□□□ -1.35
SMARCAL1-206ENST00000427645 TMEM140Q9NV12 185 aa6.63□□□□□ -1.35
SMARCAL1-206ENST00000427645 C1RLQ9NZP8 487 aa6.63□□□□□ -1.35
SMARCAL1-206ENST00000427645 TENM1Q9UKZ4 2725 aa6.63□□□□□ -1.35
SMARCAL1-206ENST00000427645 WNK2Q9Y3S1 2297 aa6.62□□□□□ -1.35
SMARCAL1-206ENST00000427645 IGHV3-72A0A0B4J1Y9 119 aa6.62□□□□□ -1.35
SMARCAL1-206ENST00000427645 WRBO00258 174 aa6.62□□□□□ -1.35
SMARCAL1-206ENST00000427645 UPK2O00526 184 aa6.62□□□□□ -1.35
SMARCAL1-206ENST00000427645 KCNAB3O43448 404 aa6.62□□□□□ -1.35
SMARCAL1-206ENST00000427645 MPC2O95563 127 aa6.62□□□□□ -1.35
SMARCAL1-206ENST00000427645 SNRNP70P08621 437 aaKnown RBP6.62□□□□□ -1.35
SMARCAL1-206ENST00000427645 IGHV4-38-2P0DP08 117 aa6.62□□□□□ -1.35
SMARCAL1-206ENST00000427645 SLC25A4P12235 298 aa6.62□□□□□ -1.35
SMARCAL1-206ENST00000427645 MAS1LP35410 378 aa6.62□□□□□ -1.35
SMARCAL1-206ENST00000427645 NUP62P37198 522 aaPredicted RBP6.62□□□□□ -1.35
SMARCAL1-206ENST00000427645 UBE2KP61086 200 aa6.62□□□□□ -1.35
SMARCAL1-206ENST00000427645 HES1Q14469 280 aa6.62□□□□□ -1.35
SMARCAL1-206ENST00000427645 KLF17Q5JT82 389 aaPredicted RBP6.62□□□□□ -1.35
SMARCAL1-206ENST00000427645 C11orf87Q6NUJ2 197 aa6.62□□□□□ -1.35
SMARCAL1-206ENST00000427645 PRSS54Q6PEW0 395 aa6.62□□□□□ -1.35
SMARCAL1-206ENST00000427645 TMEM65Q6PI78 240 aa6.62□□□□□ -1.35
SMARCAL1-206ENST00000427645 Q6ZRM9 215 aa6.62□□□□□ -1.35
SMARCAL1-206ENST00000427645 C9orf139Q6ZV77 190 aa6.62□□□□□ -1.35
SMARCAL1-206ENST00000427645 SSX9Q7RTT3 188 aa6.62□□□□□ -1.35
SMARCAL1-206ENST00000427645 PUSL1Q8N0Z8 303 aaKnown RBP6.62□□□□□ -1.35
SMARCAL1-206ENST00000427645 TMEM167AQ8TBQ9 72 aa6.62□□□□□ -1.35
SMARCAL1-206ENST00000427645 EAF1Q96JC9 268 aaPredicted RBP6.62□□□□□ -1.35
SMARCAL1-206ENST00000427645 RAB40CQ96S21 281 aa6.62□□□□□ -1.35
SMARCAL1-206ENST00000427645 KIAA1456Q9P272 454 aa6.62□□□□□ -1.35
SMARCAL1-206ENST00000427645 CACNG5Q9UF02 275 aa6.62□□□□□ -1.35
SMARCAL1-206ENST00000427645 PRNDQ9UKY0 176 aa6.62□□□□□ -1.35
SMARCAL1-206ENST00000427645 POMT1Q9Y6A1 747 aa6.62□□□□□ -1.35
SMARCAL1-206ENST00000427645 SRRM4A7MD48 611 aaKnown RBP6.61□□□□□ -1.35
SMARCAL1-206ENST00000427645 E5RGE8 158 aa6.61□□□□□ -1.35
SMARCAL1-206ENST00000427645 K7EPK0 472 aa6.61□□□□□ -1.35
SMARCAL1-206ENST00000427645 SYNGR2O43760 224 aa6.61□□□□□ -1.35
SMARCAL1-206ENST00000427645 GPR137BO60478 399 aa6.61□□□□□ -1.35
SMARCAL1-206ENST00000427645 ACTL6BO94805 426 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms