RNA–Protein interactions for RNA: ENST00000427118.1

AFF3-208, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 4

Gene AFF3, Length 528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-208ENST00000427118 SIRT7Q9NRC8 400 aa13□□□□□ -0.33
AFF3-208ENST00000427118 CTNNBIP1Q9NSA3 81 aaPredicted RBP13□□□□□ -0.33
AFF3-208ENST00000427118 MED9Q9NWA0 146 aa13□□□□□ -0.33
AFF3-208ENST00000427118 IGHV1-69DA0A0B4J2H0 117 aa12.99□□□□□ -0.33
AFF3-208ENST00000427118 RPS10-NUDT3A0A1W2PQS6 291 aa12.99□□□□□ -0.33
AFF3-208ENST00000427118 TMEM89A2RUT3 159 aa12.99□□□□□ -0.33
AFF3-208ENST00000427118 SSSCA1O60232 199 aa12.99□□□□□ -0.33
AFF3-208ENST00000427118 IGKV1-5P01602 117 aa12.99□□□□□ -0.33
AFF3-208ENST00000427118 IGHV1-69P01742 117 aa12.99□□□□□ -0.33
AFF3-208ENST00000427118 OMGP23515 440 aa12.99□□□□□ -0.33
AFF3-208ENST00000427118 TAS2R30P59541 319 aa12.99□□□□□ -0.33
AFF3-208ENST00000427118 ERVFRD-1P60508 538 aa12.99□□□□□ -0.33
AFF3-208ENST00000427118 ERVK-16P61578 105 aa12.99□□□□□ -0.33
AFF3-208ENST00000427118 POLR2GP62487 172 aaKnown RBP eCLIP12.99□□□□□ -0.33
AFF3-208ENST00000427118 RPL30P62888 115 aaKnown RBP12.99□□□□□ -0.33
AFF3-208ENST00000427118 CT45A1Q5HYN5 189 aa12.99□□□□□ -0.33
AFF3-208ENST00000427118 CXorf66Q5JRM2 361 aaPredicted RBP12.99□□□□□ -0.33
AFF3-208ENST00000427118 RBMS3Q6XE24 437 aaKnown RBP12.99□□□□□ -0.33
AFF3-208ENST00000427118 SLC25A48Q6ZT89 311 aaKnown RBP12.99□□□□□ -0.33
AFF3-208ENST00000427118 TCF23Q7RTU1 214 aa12.99□□□□□ -0.33
AFF3-208ENST00000427118 H2BFWTQ7Z2G1 175 aa12.99□□□□□ -0.33
AFF3-208ENST00000427118 ZNF439Q8NDP4 499 aa12.99□□□□□ -0.33
AFF3-208ENST00000427118 OR4S2Q8NH73 311 aa12.99□□□□□ -0.33
AFF3-208ENST00000427118 CT45A3Q8NHU0 189 aa12.99□□□□□ -0.33
AFF3-208ENST00000427118 TNFRSF14Q92956 283 aa12.99□□□□□ -0.33
AFF3-208ENST00000427118 C5orf30Q96GV9 206 aa12.99□□□□□ -0.33
AFF3-208ENST00000427118 AIFM2Q9BRQ8 373 aa12.99□□□□□ -0.33
AFF3-208ENST00000427118 C11orf1Q9H5F2 150 aa12.99□□□□□ -0.33
AFF3-208ENST00000427118 CYTL1Q9NRR1 136 aa12.99□□□□□ -0.33
AFF3-208ENST00000427118 LYRM2Q9NU23 88 aaPredicted RBP12.99□□□□□ -0.33
AFF3-208ENST00000427118 PFDN2Q9UHV9 154 aa12.99□□□□□ -0.33
AFF3-208ENST00000427118 DSCAML1Q8TD84 2053 aa12.99□□□□□ -0.33
AFF3-208ENST00000427118 MEX3AA1L020 520 aaKnown RBP12.98□□□□□ -0.33
AFF3-208ENST00000427118 RNASEK-C17orf49H0YIS7 233 aa12.98□□□□□ -0.33
AFF3-208ENST00000427118 KCNAB3O43448 404 aa12.98□□□□□ -0.33
AFF3-208ENST00000427118 SYNGR2O43760 224 aa12.98□□□□□ -0.33
AFF3-208ENST00000427118 CHST1O43916 411 aa12.98□□□□□ -0.33
AFF3-208ENST00000427118 SCAF4O95104 1147 aaKnown RBP12.98□□□□□ -0.33
AFF3-208ENST00000427118 CAV2P51636 162 aa12.98□□□□□ -0.33
AFF3-208ENST00000427118 ZNF816Q0VGE8 651 aaPredicted RBP12.98□□□□□ -0.33
AFF3-208ENST00000427118 PRAMEF5Q5TYX0 476 aa12.98□□□□□ -0.33
AFF3-208ENST00000427118 C12orf54Q6X4T0 127 aa12.98□□□□□ -0.33
AFF3-208ENST00000427118 STX12Q86Y82 276 aa12.98□□□□□ -0.33
AFF3-208ENST00000427118 FBXL17Q9UF56 701 aa12.98□□□□□ -0.33
AFF3-208ENST00000427118 WSB1Q9Y6I7 421 aa12.98□□□□□ -0.33
AFF3-208ENST00000427118 KIAA2026Q5HYC2 2103 aa12.98□□□□□ -0.33
AFF3-208ENST00000427118 A0A0G2JRQ6 117 aa12.97□□□□□ -0.33
AFF3-208ENST00000427118 S1PR2O95136 353 aa12.97□□□□□ -0.33
AFF3-208ENST00000427118 KRASP01116 189 aa12.97□□□□□ -0.33
AFF3-208ENST00000427118 RRASP10301 218 aa12.97□□□□□ -0.33
AFF3-208ENST00000427118 UBE2E1P51965 193 aa12.97□□□□□ -0.33
AFF3-208ENST00000427118 ZNF134P52741 427 aa12.97□□□□□ -0.33
AFF3-208ENST00000427118 KLRD1Q13241 179 aa12.97□□□□□ -0.33
AFF3-208ENST00000427118 ZNF266Q14584 549 aa12.97□□□□□ -0.33
AFF3-208ENST00000427118 FAM53AQ6NSI3 398 aaPredicted RBP12.97□□□□□ -0.33
AFF3-208ENST00000427118 FAM71F2Q6NXP2 309 aa12.97□□□□□ -0.33
AFF3-208ENST00000427118 LYG1Q8N1E2 194 aa12.97□□□□□ -0.33
AFF3-208ENST00000427118 LINC00311Q8N616 119 aa12.97□□□□□ -0.33
AFF3-208ENST00000427118 UBAC2Q8NBM4 344 aa12.97□□□□□ -0.33
AFF3-208ENST00000427118 RNF141Q8WVD5 230 aa12.97□□□□□ -0.33
AFF3-208ENST00000427118 R3HDM4Q96D70 268 aa12.97□□□□□ -0.33
AFF3-208ENST00000427118 SMIM8Q96KF7 97 aa12.97□□□□□ -0.33
AFF3-208ENST00000427118 CIB3Q96Q77 187 aaPredicted RBP12.97□□□□□ -0.33
AFF3-208ENST00000427118 MAGT1Q9H0U3 335 aa12.97□□□□□ -0.33
AFF3-208ENST00000427118 TNFRSF19Q9NS68 423 aa12.97□□□□□ -0.33
AFF3-208ENST00000427118 LINC00473A8K010 186 aa12.96□□□□□ -0.33
AFF3-208ENST00000427118 HAX1O00165 279 aa12.96□□□□□ -0.33
AFF3-208ENST00000427118 HOXA3O43365 443 aaPredicted RBP12.96□□□□□ -0.33
AFF3-208ENST00000427118 RAMP3O60896 148 aa12.96□□□□□ -0.33
AFF3-208ENST00000427118 FCGR3BO75015 233 aa12.96□□□□□ -0.33
AFF3-208ENST00000427118 NMBP08949 121 aa12.96□□□□□ -0.33
AFF3-208ENST00000427118 P0C879 139 aa12.96□□□□□ -0.33
AFF3-208ENST00000427118 IGHV1-8P0DP01 117 aa12.96□□□□□ -0.33
AFF3-208ENST00000427118 NQO2P16083 231 aa12.96□□□□□ -0.33
AFF3-208ENST00000427118 IL3RAP26951 378 aa12.96□□□□□ -0.33
AFF3-208ENST00000427118 EWSR1Q01844 656 aaKnown RBP eCLIP12.96□□□□□ -0.33
AFF3-208ENST00000427118 OR2B11Q5JQS5 317 aa12.96□□□□□ -0.33
AFF3-208ENST00000427118 DHRS7BQ6IAN0 325 aaPredicted RBP12.96□□□□□ -0.33
AFF3-208ENST00000427118 SESN1Q9Y6P5 492 aa12.96□□□□□ -0.33
AFF3-208ENST00000427118 SAA2-SAA4A0A096LPE2 208 aa12.95□□□□□ -0.34
AFF3-208ENST00000427118 A0A1W2PRD5 423 aa12.95□□□□□ -0.34
AFF3-208ENST00000427118 A0A1W2PRF3 423 aa12.95□□□□□ -0.34
AFF3-208ENST00000427118 A0A1W2PRM7 423 aa12.95□□□□□ -0.34
AFF3-208ENST00000427118 MARCH11A6NNE9 402 aa12.95□□□□□ -0.34
AFF3-208ENST00000427118 DFFBO76075 338 aa12.95□□□□□ -0.34
AFF3-208ENST00000427118 SAA2P0DJI9 122 aaPredicted RBP12.95□□□□□ -0.34
AFF3-208ENST00000427118 G6PCP35575 357 aa12.95□□□□□ -0.34
AFF3-208ENST00000427118 COMPP49747 757 aaPredicted RBP12.95□□□□□ -0.34
AFF3-208ENST00000427118 RTL8BQ17RB0 113 aa12.95□□□□□ -0.34
AFF3-208ENST00000427118 MIDNQ504T8 468 aa12.95□□□□□ -0.34
AFF3-208ENST00000427118 AWAT1Q58HT5 328 aa12.95□□□□□ -0.34
AFF3-208ENST00000427118 RPL39P5Q59GN2 51 aa12.95□□□□□ -0.34
AFF3-208ENST00000427118 RPL7L1Q6DKI1 246 aaKnown RBP12.95□□□□□ -0.34
AFF3-208ENST00000427118 HCP5Q6MZN7 132 aa12.95□□□□□ -0.34
AFF3-208ENST00000427118 COMMD7Q86VX2 200 aa12.95□□□□□ -0.34
AFF3-208ENST00000427118 PNKDQ8N490 385 aa12.95□□□□□ -0.34
AFF3-208ENST00000427118 PIP4P2Q8N4L2 257 aa12.95□□□□□ -0.34
AFF3-208ENST00000427118 TMEM252Q8N6L7 170 aa12.95□□□□□ -0.34
AFF3-208ENST00000427118 OR13D1Q8NGV5 346 aa12.95□□□□□ -0.34
AFF3-208ENST00000427118 CLCC1Q96S66 551 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms