RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 RAMP3O60896 148 aa12.68□□□□□ -0.38
SHOX2-202ENST00000425436 MMP23AO75900 390 aa12.68□□□□□ -0.38
SHOX2-202ENST00000425436 KRASP01116 189 aa12.68□□□□□ -0.38
SHOX2-202ENST00000425436 FGF2P09038 288 aa12.68□□□□□ -0.38
SHOX2-202ENST00000425436 HNF1AP20823 631 aa12.68□□□□□ -0.38
SHOX2-202ENST00000425436 OMGP23515 440 aa12.68□□□□□ -0.38
SHOX2-202ENST00000425436 THBS3P49746 956 aa12.68□□□□□ -0.38
SHOX2-202ENST00000425436 MIDNQ504T8 468 aa12.68□□□□□ -0.38
SHOX2-202ENST00000425436 NANPQ8TBE9 248 aa12.68□□□□□ -0.38
SHOX2-202ENST00000425436 MARC2Q969Z3 335 aa12.68□□□□□ -0.38
SHOX2-202ENST00000425436 CIB3Q96Q77 187 aaPredicted RBP12.68□□□□□ -0.38
SHOX2-202ENST00000425436 SMIM3Q9BZL3 60 aa12.68□□□□□ -0.38
SHOX2-202ENST00000425436 CDC42EP3Q9UKI2 254 aa12.68□□□□□ -0.38
SHOX2-202ENST00000425436 TRAV40A0A0B4J280 105 aa12.67□□□□□ -0.38
SHOX2-202ENST00000425436 IGSF23A1L1A6 192 aa12.67□□□□□ -0.38
SHOX2-202ENST00000425436 ZNF705EA8MWA4 302 aaPredicted RBP12.67□□□□□ -0.38
SHOX2-202ENST00000425436 TEX46H3BTG2 121 aa12.67□□□□□ -0.38
SHOX2-202ENST00000425436 CRLF1O75462 422 aa12.67□□□□□ -0.38
SHOX2-202ENST00000425436 SULT1A1P50225 295 aa12.67□□□□□ -0.38
SHOX2-202ENST00000425436 ZNF134P52741 427 aa12.67□□□□□ -0.38
SHOX2-202ENST00000425436 ERVK-16P61578 105 aa12.67□□□□□ -0.38
SHOX2-202ENST00000425436 ZNF816Q0VGE8 651 aaPredicted RBP12.67□□□□□ -0.38
SHOX2-202ENST00000425436 KLRD1Q13241 179 aa12.67□□□□□ -0.38
SHOX2-202ENST00000425436 CT45A1Q5HYN5 189 aa12.67□□□□□ -0.38
SHOX2-202ENST00000425436 FAM53AQ6NSI3 398 aaPredicted RBP12.67□□□□□ -0.38
SHOX2-202ENST00000425436 HEPN1Q6WQI6 88 aa12.67□□□□□ -0.38
SHOX2-202ENST00000425436 C1orf122Q6ZSJ8 110 aa12.67□□□□□ -0.38
SHOX2-202ENST00000425436 OR1S2Q8NGQ3 325 aa12.67□□□□□ -0.38
SHOX2-202ENST00000425436 CT45A3Q8NHU0 189 aa12.67□□□□□ -0.38
SHOX2-202ENST00000425436 AIFM2Q9BRQ8 373 aa12.67□□□□□ -0.38
SHOX2-202ENST00000425436 PSENENQ9NZ42 101 aa12.67□□□□□ -0.38
SHOX2-202ENST00000425436 HSPB7Q9UBY9 170 aa12.67□□□□□ -0.38
SHOX2-202ENST00000425436 SOX21Q9Y651 276 aaPredicted RBP12.67□□□□□ -0.38
SHOX2-202ENST00000425436 CUBNO60494 3623 aa12.67□□□□□ -0.38
SHOX2-202ENST00000425436 SETD2Q9BYW2 2564 aaPredicted RBP12.67□□□□□ -0.38
SHOX2-202ENST00000425436 CENPVL3A0A0U1RRI6 287 aa12.67□□□□□ -0.38
SHOX2-202ENST00000425436 A0A1W2PRD5 423 aa12.67□□□□□ -0.38
SHOX2-202ENST00000425436 A0A1W2PRF3 423 aa12.67□□□□□ -0.38
SHOX2-202ENST00000425436 A0A1W2PRM7 423 aa12.67□□□□□ -0.38
SHOX2-202ENST00000425436 LINC00473A8K010 186 aa12.67□□□□□ -0.38
SHOX2-202ENST00000425436 TXNL1O43396 289 aa12.67□□□□□ -0.38
SHOX2-202ENST00000425436 S1PR2O95136 353 aa12.67□□□□□ -0.38
SHOX2-202ENST00000425436 SPP1P10451 314 aa12.67□□□□□ -0.38
SHOX2-202ENST00000425436 PRTN3P24158 256 aa12.67□□□□□ -0.38
SHOX2-202ENST00000425436 G6PCP35575 357 aa12.67□□□□□ -0.38
SHOX2-202ENST00000425436 PAX9P55771 341 aa12.67□□□□□ -0.38
SHOX2-202ENST00000425436 BRWD1-AS2P59051 145 aa12.67□□□□□ -0.38
SHOX2-202ENST00000425436 UBE2KP61086 200 aa12.67□□□□□ -0.38
SHOX2-202ENST00000425436 HBG1P69891 147 aa12.67□□□□□ -0.38
SHOX2-202ENST00000425436 HBG2P69892 147 aa12.67□□□□□ -0.38
SHOX2-202ENST00000425436 TAGLNQ01995 201 aaKnown RBP12.67□□□□□ -0.38
SHOX2-202ENST00000425436 TNFRSF9Q07011 255 aa12.67□□□□□ -0.38
SHOX2-202ENST00000425436 TOR2AQ5JU69 321 aa12.67□□□□□ -0.38
SHOX2-202ENST00000425436 PRAMEF5Q5TYX0 476 aa12.67□□□□□ -0.38
SHOX2-202ENST00000425436 RUSC1-AS1Q66K80 236 aa12.67□□□□□ -0.38
SHOX2-202ENST00000425436 NCR3LG1Q68D85 454 aa12.67□□□□□ -0.38
SHOX2-202ENST00000425436 SLC25A48Q6ZT89 311 aaKnown RBP12.67□□□□□ -0.38
SHOX2-202ENST00000425436 C8orf31Q8N9H6 132 aa12.67□□□□□ -0.38
SHOX2-202ENST00000425436 ZNF439Q8NDP4 499 aa12.67□□□□□ -0.38
SHOX2-202ENST00000425436 OR4S2Q8NH73 311 aa12.67□□□□□ -0.38
SHOX2-202ENST00000425436 C22orf15Q8WYQ4 148 aa12.67□□□□□ -0.38
SHOX2-202ENST00000425436 TNFRSF14Q92956 283 aa12.67□□□□□ -0.38
SHOX2-202ENST00000425436 GNPNAT1Q96EK6 184 aaPredicted RBP12.67□□□□□ -0.38
SHOX2-202ENST00000425436 hCG_1809904A0A1W2PP81 198 aa12.66□□□□□ -0.38
SHOX2-202ENST00000425436 A0A1W2PPE2 198 aa12.66□□□□□ -0.38
SHOX2-202ENST00000425436 A0A1W2PR64 198 aa12.66□□□□□ -0.38
SHOX2-202ENST00000425436 A0A1W2PRV1 198 aa12.66□□□□□ -0.38
SHOX2-202ENST00000425436 RNASEK-C17orf49H0YIS7 233 aa12.66□□□□□ -0.38
SHOX2-202ENST00000425436 FCGR3BO75015 233 aa12.66□□□□□ -0.38
SHOX2-202ENST00000425436 PROP1O75360 226 aa12.66□□□□□ -0.38
SHOX2-202ENST00000425436 TMEM50AO95807 157 aa12.66□□□□□ -0.38
SHOX2-202ENST00000425436 FSHBP01225 129 aa12.66□□□□□ -0.38
SHOX2-202ENST00000425436 IGHV1-8P0DP01 117 aa12.66□□□□□ -0.38
SHOX2-202ENST00000425436 NQO2P16083 231 aa12.66□□□□□ -0.38
SHOX2-202ENST00000425436 HOXB4P17483 251 aaPredicted RBP12.66□□□□□ -0.38
SHOX2-202ENST00000425436 NFYBP25208 207 aa12.66□□□□□ -0.38
SHOX2-202ENST00000425436 BRD3OSQ6XYD6 125 aa12.66□□□□□ -0.38
SHOX2-202ENST00000425436 IL34Q6ZMJ4 242 aa12.66□□□□□ -0.38
SHOX2-202ENST00000425436 STPG2Q8N412 459 aa12.66□□□□□ -0.38
SHOX2-202ENST00000425436 PNKDQ8N490 385 aa12.66□□□□□ -0.38
SHOX2-202ENST00000425436 R3HDM4Q96D70 268 aa12.66□□□□□ -0.38
SHOX2-202ENST00000425436 WFDC1Q9HC57 220 aa12.66□□□□□ -0.38
SHOX2-202ENST00000425436 PARP11Q9NR21 331 aa12.66□□□□□ -0.38
SHOX2-202ENST00000425436 STRAPQ9Y3F4 350 aaKnown RBP12.66□□□□□ -0.38
SHOX2-202ENST00000425436 MARCH11A6NNE9 402 aa12.65□□□□□ -0.38
SHOX2-202ENST00000425436 UMAD1C9J7I0 102 aa12.65□□□□□ -0.38
SHOX2-202ENST00000425436 TRIM77I1YAP6 450 aa12.65□□□□□ -0.38
SHOX2-202ENST00000425436 FBXO24O75426 580 aa12.65□□□□□ -0.38
SHOX2-202ENST00000425436 SRD5A1P18405 259 aa12.65□□□□□ -0.38
SHOX2-202ENST00000425436 ZP3P21754 424 aa12.65□□□□□ -0.38
SHOX2-202ENST00000425436 COX7A1P24310 79 aa12.65□□□□□ -0.38
SHOX2-202ENST00000425436 AARDQ4LEZ3 155 aa12.65□□□□□ -0.38
SHOX2-202ENST00000425436 OR2B11Q5JQS5 317 aa12.65□□□□□ -0.38
SHOX2-202ENST00000425436 UTF1Q5T230 341 aa12.65□□□□□ -0.38
SHOX2-202ENST00000425436 HCP5Q6MZN7 132 aa12.65□□□□□ -0.38
SHOX2-202ENST00000425436 BCL6BQ8N143 479 aaPredicted RBP12.65□□□□□ -0.38
SHOX2-202ENST00000425436 OR5C1Q8NGR4 320 aa12.65□□□□□ -0.38
SHOX2-202ENST00000425436 OR52E5Q8NH55 327 aa12.65□□□□□ -0.38
SHOX2-202ENST00000425436 ATP5SQ99766 215 aa12.65□□□□□ -0.38
SHOX2-202ENST00000425436 NUP50Q9UKX7 468 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms