RNA–Protein interactions for RNA: ENST00000422797.5

LIMS1-207, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene LIMS1, Length 1,544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-207ENST00000422797 OPN3Q9H1Y3 402 aaPredicted RBP9.15□□□□□ -0.94
LIMS1-207ENST00000422797 ENY2Q9NPA8 101 aa9.15□□□□□ -0.94
LIMS1-207ENST00000422797 ZNF586Q9NXT0 402 aa9.15□□□□□ -0.94
LIMS1-207ENST00000422797 SLC45A2Q9UMX9 530 aa9.15□□□□□ -0.94
LIMS1-207ENST00000422797 REV3LO60673 3130 aa9.15□□□□□ -0.94
LIMS1-207ENST00000422797 SAA2-SAA4A0A096LPE2 208 aa9.15□□□□□ -0.95
LIMS1-207ENST00000422797 F2RL2O00254 374 aa9.15□□□□□ -0.95
LIMS1-207ENST00000422797 MGST3O14880 152 aa9.15□□□□□ -0.95
LIMS1-207ENST00000422797 GFRA3O60609 400 aa9.15□□□□□ -0.95
LIMS1-207ENST00000422797 FCGR3BO75015 233 aa9.15□□□□□ -0.95
LIMS1-207ENST00000422797 REG1AP05451 166 aa9.15□□□□□ -0.95
LIMS1-207ENST00000422797 LGALS4P56470 323 aa9.15□□□□□ -0.95
LIMS1-207ENST00000422797 OR10J3Q5JRS4 329 aa9.15□□□□□ -0.95
LIMS1-207ENST00000422797 Q6ZT83 130 aa9.15□□□□□ -0.95
LIMS1-207ENST00000422797 C11orf53Q8IXP5 236 aa9.15□□□□□ -0.95
LIMS1-207ENST00000422797 OR13A1Q8NGR1 328 aa9.15□□□□□ -0.95
LIMS1-207ENST00000422797 TMEM68Q96MH6 324 aa9.15□□□□□ -0.95
LIMS1-207ENST00000422797 HES7Q9BYE0 225 aa9.15□□□□□ -0.95
LIMS1-207ENST00000422797 MRPL18Q9H0U6 180 aaKnown RBP9.15□□□□□ -0.95
LIMS1-207ENST00000422797 MS4A5Q9H3V2 200 aa9.15□□□□□ -0.95
LIMS1-207ENST00000422797 GNG12Q9UBI6 72 aa9.15□□□□□ -0.95
LIMS1-207ENST00000422797 FOXA2Q9Y261 457 aaPredicted RBP9.15□□□□□ -0.95
LIMS1-207ENST00000422797 PI4KAP42356 2102 aa9.14□□□□□ -0.95
LIMS1-207ENST00000422797 SCO2A0A1W2PP80 73 aa9.14□□□□□ -0.95
LIMS1-207ENST00000422797 C15orf61A6NNL5 157 aa9.14□□□□□ -0.95
LIMS1-207ENST00000422797 ZNHIT1O43257 154 aa9.14□□□□□ -0.95
LIMS1-207ENST00000422797 TIMM8AO60220 97 aaPredicted RBP9.14□□□□□ -0.95
LIMS1-207ENST00000422797 IGKV3-15P01624 115 aa9.14□□□□□ -0.95
LIMS1-207ENST00000422797 IL6RP08887 468 aaPredicted RBP9.14□□□□□ -0.95
LIMS1-207ENST00000422797 OR5G3P0C626 314 aa9.14□□□□□ -0.95
LIMS1-207ENST00000422797 CFHR2P36980 270 aa9.14□□□□□ -0.95
LIMS1-207ENST00000422797 THBS3P49746 956 aa9.14□□□□□ -0.95
LIMS1-207ENST00000422797 ZXDAP98168 799 aa9.14□□□□□ -0.95
LIMS1-207ENST00000422797 RELBQ01201 579 aa9.14□□□□□ -0.95
LIMS1-207ENST00000422797 MBNL2Q5VZF2 373 aaKnown RBP9.14□□□□□ -0.95
LIMS1-207ENST00000422797 TOMM20LQ6UXN7 152 aa9.14□□□□□ -0.95
LIMS1-207ENST00000422797 GCSAMQ8N6F7 178 aa9.14□□□□□ -0.95
LIMS1-207ENST00000422797 OR1L6Q8NGR2 347 aa9.14□□□□□ -0.95
LIMS1-207ENST00000422797 OCC1Q8TAD7 63 aa9.14□□□□□ -0.95
LIMS1-207ENST00000422797 SDSLQ96GA7 329 aa9.14□□□□□ -0.95
LIMS1-207ENST00000422797 RNF2Q99496 336 aa9.14□□□□□ -0.95
LIMS1-207ENST00000422797 DERL1Q9BUN8 251 aa9.14□□□□□ -0.95
LIMS1-207ENST00000422797 VAMP8Q9BV40 100 aa9.14□□□□□ -0.95
LIMS1-207ENST00000422797 PARD6AQ9NPB6 346 aa9.14□□□□□ -0.95
LIMS1-207ENST00000422797 OSTCQ9NRP0 149 aa9.14□□□□□ -0.95
LIMS1-207ENST00000422797 CBLN4Q9NTU7 201 aa9.14□□□□□ -0.95
LIMS1-207ENST00000422797 TCF19Q9Y242 345 aa9.14□□□□□ -0.95
LIMS1-207ENST00000422797 CHD3Q12873 2000 aaKnown RBP9.13□□□□□ -0.95
LIMS1-207ENST00000422797 COL27A1Q8IZC6 1860 aaPredicted RBP9.13□□□□□ -0.95
LIMS1-207ENST00000422797 PCSK5Q92824 1860 aa9.13□□□□□ -0.95
LIMS1-207ENST00000422797 TRBV20OR9-2A0A075B6H5 130 aa9.13□□□□□ -0.95
LIMS1-207ENST00000422797 PATE3B3GLJ2 98 aa9.13□□□□□ -0.95
LIMS1-207ENST00000422797 C9orf172C9J069 976 aa9.13□□□□□ -0.95
LIMS1-207ENST00000422797 M0R1X1 148 aa9.13□□□□□ -0.95
LIMS1-207ENST00000422797 LINC00614P0C842 121 aa9.13□□□□□ -0.95
LIMS1-207ENST00000422797 IGHV1-2P23083 117 aa9.13□□□□□ -0.95
LIMS1-207ENST00000422797 NPY1RP25929 384 aa9.13□□□□□ -0.95
LIMS1-207ENST00000422797 BRS3P32247 399 aa9.13□□□□□ -0.95
LIMS1-207ENST00000422797 SSTR5P35346 364 aa9.13□□□□□ -0.95
LIMS1-207ENST00000422797 CEBPDP49716 269 aaPredicted RBP9.13□□□□□ -0.95
LIMS1-207ENST00000422797 TAS2R45P59539 299 aa9.13□□□□□ -0.95
LIMS1-207ENST00000422797 RPL31P62899 125 aaKnown RBP9.13□□□□□ -0.95
LIMS1-207ENST00000422797 EFNB3Q15768 340 aa9.13□□□□□ -0.95
LIMS1-207ENST00000422797 POU2AF1Q16633 256 aa9.13□□□□□ -0.95
LIMS1-207ENST00000422797 MORN2Q502X0 79 aa9.13□□□□□ -0.95
LIMS1-207ENST00000422797 TPTE2P1Q5T6R2 138 aa9.13□□□□□ -0.95
LIMS1-207ENST00000422797 MIC13Q5XKP0 118 aa9.13□□□□□ -0.95
LIMS1-207ENST00000422797 RASL11AQ6T310 242 aa9.13□□□□□ -0.95
LIMS1-207ENST00000422797 PQLC2Q6ZP29 291 aa9.13□□□□□ -0.95
LIMS1-207ENST00000422797 LINC00696Q6ZRV3 163 aa9.13□□□□□ -0.95
LIMS1-207ENST00000422797 BAGE3Q86Y29 109 aa9.13□□□□□ -0.95
LIMS1-207ENST00000422797 BAGE2Q86Y30 109 aa9.13□□□□□ -0.95
LIMS1-207ENST00000422797 TMEM256Q8N2U0 113 aa9.13□□□□□ -0.95
LIMS1-207ENST00000422797 SIGLECL1Q8N7X8 197 aa9.13□□□□□ -0.95
LIMS1-207ENST00000422797 FAM169BQ8N8A8 192 aa9.13□□□□□ -0.95
LIMS1-207ENST00000422797 ZNF114Q8NC26 417 aa9.13□□□□□ -0.95
LIMS1-207ENST00000422797 EAF1Q96JC9 268 aaPredicted RBP9.13□□□□□ -0.95
LIMS1-207ENST00000422797 SAMD10Q9BYL1 202 aa9.13□□□□□ -0.95
LIMS1-207ENST00000422797 PATZ1Q9HBE1 687 aaKnown RBP9.13□□□□□ -0.95
LIMS1-207ENST00000422797 TMEM140Q9NV12 185 aa9.13□□□□□ -0.95
LIMS1-207ENST00000422797 IL19Q9UHD0 177 aa9.13□□□□□ -0.95
LIMS1-207ENST00000422797 PRNDQ9UKY0 176 aa9.13□□□□□ -0.95
LIMS1-207ENST00000422797 FCN1O00602 326 aa9.12□□□□□ -0.95
LIMS1-207ENST00000422797 WNT9BO14905 357 aa9.12□□□□□ -0.95
LIMS1-207ENST00000422797 HLA-DQA1P01909 254 aa9.12□□□□□ -0.95
LIMS1-207ENST00000422797 CELA3BP08861 270 aa9.12□□□□□ -0.95
LIMS1-207ENST00000422797 PRDX2P32119 198 aa9.12□□□□□ -0.95
LIMS1-207ENST00000422797 MPV17P39210 176 aa9.12□□□□□ -0.95
LIMS1-207ENST00000422797 GNG4P50150 75 aa9.12□□□□□ -0.95
LIMS1-207ENST00000422797 HSPE1P61604 102 aaKnown RBP9.12□□□□□ -0.95
LIMS1-207ENST00000422797 C3AR1Q16581 482 aa9.12□□□□□ -0.95
LIMS1-207ENST00000422797 TIGITQ495A1 244 aa9.12□□□□□ -0.95
LIMS1-207ENST00000422797 GCSAMLQ5JQS6 135 aa9.12□□□□□ -0.95
LIMS1-207ENST00000422797 FAM214BQ7L5A3 538 aa9.12□□□□□ -0.95
LIMS1-207ENST00000422797 MMD2Q8IY49 270 aa9.12□□□□□ -0.95
LIMS1-207ENST00000422797 STPG3Q8N7X2 389 aa9.12□□□□□ -0.95
LIMS1-207ENST00000422797 SLC24A4Q8NFF2 622 aa9.12□□□□□ -0.95
LIMS1-207ENST00000422797 TECRQ9NZ01 308 aaKnown RBP9.12□□□□□ -0.95
LIMS1-207ENST00000422797 PLA2G3Q9NZ20 509 aa9.12□□□□□ -0.95
LIMS1-207ENST00000422797 CLCF1Q9UBD9 225 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms