RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 SSX9Q7RTT3 188 aa16.9■□□□□ 0.3
TRAF4-204ENST00000422344 OR51H1Q8NH63 302 aa16.9■□□□□ 0.3
TRAF4-204ENST00000422344 GPX8Q8TED1 209 aa16.9■□□□□ 0.3
TRAF4-204ENST00000422344 RANGRFQ9HD47 186 aaPredicted RBP16.9■□□□□ 0.3
TRAF4-204ENST00000422344 SCOCQ9UIL1 159 aa16.9■□□□□ 0.3
TRAF4-204ENST00000422344 RBFOX2O43251 390 aaKnown RBP eCLIP16.89■□□□□ 0.291e-6■□□□□ 9.7
TRAF4-204ENST00000422344 SAP30O75446 220 aa16.89■□□□□ 0.29
TRAF4-204ENST00000422344 HLA-DMAP28067 261 aa16.89■□□□□ 0.29
TRAF4-204ENST00000422344 MAS1LP35410 378 aa16.89■□□□□ 0.29
TRAF4-204ENST00000422344 BRWD1-AS2P59051 145 aa16.89■□□□□ 0.29
TRAF4-204ENST00000422344 CD69Q07108 199 aa16.89■□□□□ 0.29
TRAF4-204ENST00000422344 C10orf55Q5SWW7 151 aa16.89■□□□□ 0.29
TRAF4-204ENST00000422344 ZNF429Q86V71 674 aa16.89■□□□□ 0.29
TRAF4-204ENST00000422344 PUSL1Q8N0Z8 303 aaKnown RBP16.89■□□□□ 0.29
TRAF4-204ENST00000422344 ADAD2Q8NCV1 583 aaKnown RBP16.89■□□□□ 0.29
TRAF4-204ENST00000422344 OR6F1Q8NGZ6 308 aa16.89■□□□□ 0.29
TRAF4-204ENST00000422344 TMEM167AQ8TBQ9 72 aa16.89■□□□□ 0.29
TRAF4-204ENST00000422344 MOB3AQ96BX8 217 aa16.89■□□□□ 0.29
TRAF4-204ENST00000422344 USMG5Q96IX5 58 aa16.89■□□□□ 0.29
TRAF4-204ENST00000422344 ANKRD34BA5PLL1 514 aa16.88■□□□□ 0.29
TRAF4-204ENST00000422344 ZP3P21754 424 aa16.88■□□□□ 0.29
TRAF4-204ENST00000422344 RCVRNP35243 200 aa16.88■□□□□ 0.29
TRAF4-204ENST00000422344 HRH1P35367 487 aa16.88■□□□□ 0.29
TRAF4-204ENST00000422344 ALDH3B2P48448 385 aa16.88■□□□□ 0.29
TRAF4-204ENST00000422344 TSPAN5P62079 268 aa16.88■□□□□ 0.29
TRAF4-204ENST00000422344 SLC25A42Q86VD7 318 aa16.88■□□□□ 0.29
TRAF4-204ENST00000422344 CD300LFQ8TDQ1 290 aa16.88■□□□□ 0.29
TRAF4-204ENST00000422344 HRASLSQ9HDD0 168 aa16.88■□□□□ 0.29
TRAF4-204ENST00000422344 DPPA5A6NC42 116 aa16.87■□□□□ 0.29
TRAF4-204ENST00000422344 HPRT1P00492 218 aa16.87■□□□□ 0.29
TRAF4-204ENST00000422344 GNRHRP30968 328 aa16.87■□□□□ 0.29
TRAF4-204ENST00000422344 RPL27AP46776 148 aaKnown RBP16.87■□□□□ 0.29
TRAF4-204ENST00000422344 DEFA5Q01523 94 aa16.87■□□□□ 0.29
TRAF4-204ENST00000422344 LYSMD2Q8IV50 215 aa16.87■□□□□ 0.29
TRAF4-204ENST00000422344 CMTM1Q8IZ96 169 aa16.87■□□□□ 0.29
TRAF4-204ENST00000422344 OR4A5Q8NH83 315 aa16.87■□□□□ 0.29
TRAF4-204ENST00000422344 WWC2-AS2Q96NR7 200 aa16.87■□□□□ 0.29
TRAF4-204ENST00000422344 FYTTD1Q96QD9 318 aaKnown RBP16.87■□□□□ 0.29
TRAF4-204ENST00000422344 LY86O95711 162 aa16.86■□□□□ 0.29
TRAF4-204ENST00000422344 NQO2P16083 231 aa16.86■□□□□ 0.29
TRAF4-204ENST00000422344 TAS2R31P59538 309 aa16.86■□□□□ 0.29
TRAF4-204ENST00000422344 RPL8P62917 257 aaKnown RBP16.86■□□□□ 0.29
TRAF4-204ENST00000422344 OR4A47Q6IF82 309 aa16.86■□□□□ 0.29
TRAF4-204ENST00000422344 TTC9CQ8N5M4 171 aa16.86■□□□□ 0.29
TRAF4-204ENST00000422344 OR4C12Q96R67 309 aa16.86■□□□□ 0.29
TRAF4-204ENST00000422344 PRR25Q96S07 402 aa16.86■□□□□ 0.29
TRAF4-204ENST00000422344 ELOVL1Q9BW60 279 aa16.86■□□□□ 0.29
TRAF4-204ENST00000422344 EXTL2Q9UBQ6 330 aa16.86■□□□□ 0.29
TRAF4-204ENST00000422344 ADAM30Q9UKF2 790 aa16.86■□□□□ 0.29
TRAF4-204ENST00000422344 ZNF256Q9Y2P7 627 aaPredicted RBP16.86■□□□□ 0.29
TRAF4-204ENST00000422344 FAM223BA6NKX1 122 aa16.85■□□□□ 0.29
TRAF4-204ENST00000422344 RLN1P04808 185 aa16.85■□□□□ 0.29
TRAF4-204ENST00000422344 HLA-GP17693 338 aa16.85■□□□□ 0.29
TRAF4-204ENST00000422344 S100GP29377 79 aa16.85■□□□□ 0.29
TRAF4-204ENST00000422344 RHOGP84095 191 aa16.85■□□□□ 0.29
TRAF4-204ENST00000422344 CLVS1Q8IUQ0 354 aaPredicted RBP16.85■□□□□ 0.29
TRAF4-204ENST00000422344 FAM223AQ8IWN6 122 aa16.85■□□□□ 0.29
TRAF4-204ENST00000422344 DMBX1Q8NFW5 382 aa16.85■□□□□ 0.29
TRAF4-204ENST00000422344 FXYD6Q9H0Q3 95 aa16.85■□□□□ 0.29
TRAF4-204ENST00000422344 PLEKHA2Q9HB19 425 aa16.85■□□□□ 0.29
TRAF4-204ENST00000422344 BET1LQ9NYM9 111 aa16.85■□□□□ 0.29
TRAF4-204ENST00000422344 PEF1Q9UBV8 284 aaKnown RBP16.85■□□□□ 0.29
TRAF4-204ENST00000422344 HMX3A6NHT5 357 aa16.84■□□□□ 0.29
TRAF4-204ENST00000422344 GPR31O00270 319 aa16.84■□□□□ 0.29
TRAF4-204ENST00000422344 PRH1P02810 166 aa16.84■□□□□ 0.29
TRAF4-204ENST00000422344 ERVK-16P61578 105 aa16.84■□□□□ 0.29
TRAF4-204ENST00000422344 ATP5G2Q06055 141 aa16.84■□□□□ 0.29
TRAF4-204ENST00000422344 RNASE12Q5GAN4 147 aaKnown RBP16.84■□□□□ 0.29
TRAF4-204ENST00000422344 LPCAT3Q6P1A2 487 aa16.84■□□□□ 0.29
TRAF4-204ENST00000422344 ZNF343Q6P1L6 599 aa16.84■□□□□ 0.29
TRAF4-204ENST00000422344 ACSM6Q6P461 480 aa16.84■□□□□ 0.29
TRAF4-204ENST00000422344 C15orf40Q8WUR7 153 aa16.84■□□□□ 0.29
TRAF4-204ENST00000422344 B9D2Q9BPU9 175 aa16.84■□□□□ 0.29
TRAF4-204ENST00000422344 COMMD9Q9P000 198 aa16.84■□□□□ 0.29
TRAF4-204ENST00000422344 ZNF257Q9Y2Q1 563 aa16.84■□□□□ 0.29
TRAF4-204ENST00000422344 TEX22C9J3V5 150 aa16.83■□□□□ 0.28
TRAF4-204ENST00000422344 RGS5O15539 181 aa16.83■□□□□ 0.28
TRAF4-204ENST00000422344 PGLYRP1O75594 196 aaPredicted RBP16.83■□□□□ 0.28
TRAF4-204ENST00000422344 S1PR2O95136 353 aa16.83■□□□□ 0.28
TRAF4-204ENST00000422344 NECAP1Q8NC96 275 aa16.83■□□□□ 0.28
TRAF4-204ENST00000422344 OR6Q1Q8NGQ2 317 aa16.83■□□□□ 0.28
TRAF4-204ENST00000422344 AKIP1Q9NQ31 210 aa16.83■□□□□ 0.28
TRAF4-204ENST00000422344 SLC2A9Q9NRM0 540 aa16.83■□□□□ 0.28
TRAF4-204ENST00000422344 TNCP24821 2201 aa16.82■□□□□ 0.28
TRAF4-204ENST00000422344 NOL3O60936 208 aaKnown RBP16.82■□□□□ 0.28
TRAF4-204ENST00000422344 DHFRP00374 187 aa16.82■□□□□ 0.28
TRAF4-204ENST00000422344 IL6RP08887 468 aaPredicted RBP16.82■□□□□ 0.28
TRAF4-204ENST00000422344 ZNF735P0CB33 412 aa16.82■□□□□ 0.28
TRAF4-204ENST00000422344 F2RP25116 425 aa16.82■□□□□ 0.28
TRAF4-204ENST00000422344 ZNF45Q02386 682 aa16.82■□□□□ 0.28
TRAF4-204ENST00000422344 EXOSC2Q13868 293 aaKnown RBP16.82■□□□□ 0.28
TRAF4-204ENST00000422344 POU2AF1Q16633 256 aa16.82■□□□□ 0.28
TRAF4-204ENST00000422344 TATDN3Q17R31 274 aa16.82■□□□□ 0.28
TRAF4-204ENST00000422344 RAB2BQ8WUD1 216 aa16.82■□□□□ 0.28
TRAF4-204ENST00000422344 COMMD5Q9GZQ3 224 aa16.82■□□□□ 0.28
TRAF4-204ENST00000422344 TMEM140Q9NV12 185 aa16.82■□□□□ 0.28
TRAF4-204ENST00000422344 NPIPB5A8MRT5 1133 aa16.81■□□□□ 0.28
TRAF4-204ENST00000422344 UPK2O00526 184 aa16.81■□□□□ 0.28
TRAF4-204ENST00000422344 IFNA6P05013 189 aa16.81■□□□□ 0.28
TRAF4-204ENST00000422344 SPCS2Q15005 226 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms