RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 NDUFAF3Q9BU61 184 aa3.52□□□□□ -1.85
SFXN1-202ENST00000421887 TMEM109Q9BVC6 243 aa3.52□□□□□ -1.85
SFXN1-202ENST00000421887 FUNDC2Q9BWH2 189 aa3.52□□□□□ -1.85
SFXN1-202ENST00000421887 CHST5Q9GZS9 411 aa3.52□□□□□ -1.85
SFXN1-202ENST00000421887 C11orf68Q9H3H3 251 aaKnown RBP3.52□□□□□ -1.85
SFXN1-202ENST00000421887 FBXL15Q9H469 300 aa3.52□□□□□ -1.85
SFXN1-202ENST00000421887 CMC2Q9NRP2 79 aa3.52□□□□□ -1.85
SFXN1-202ENST00000421887 OR52A1Q9UKL2 312 aa3.52□□□□□ -1.85
SFXN1-202ENST00000421887 SAMD4AQ9UPU9 718 aaKnown RBP3.52□□□□□ -1.85
SFXN1-202ENST00000421887 KLHDC2Q9Y2U9 406 aa3.52□□□□□ -1.85
SFXN1-202ENST00000421887 TMEM14AQ9Y6G1 99 aa3.52□□□□□ -1.85
SFXN1-202ENST00000421887 PKHD1P08F94 4074 aa3.52□□□□□ -1.85
SFXN1-202ENST00000421887 DNAH10Q8IVF4 4471 aa3.51□□□□□ -1.85
SFXN1-202ENST00000421887 TRAV39A0A0B4J263 110 aa3.51□□□□□ -1.85
SFXN1-202ENST00000421887 TRBV5-5A0A0J9YX44 114 aa3.51□□□□□ -1.85
SFXN1-202ENST00000421887 C2orf70A6NJV1 201 aa3.51□□□□□ -1.85
SFXN1-202ENST00000421887 MPTX1A8MV57 137 aa3.51□□□□□ -1.85
SFXN1-202ENST00000421887 H7C2Y5 167 aa3.51□□□□□ -1.85
SFXN1-202ENST00000421887 FXYD1O00168 92 aa3.51□□□□□ -1.85
SFXN1-202ENST00000421887 SLC22A1O15245 554 aa3.51□□□□□ -1.85
SFXN1-202ENST00000421887 DEFB4AO15263 64 aa3.51□□□□□ -1.85
SFXN1-202ENST00000421887 LANCL1O43813 399 aa3.51□□□□□ -1.85
SFXN1-202ENST00000421887 NDUFA3O95167 84 aa3.51□□□□□ -1.85
SFXN1-202ENST00000421887 SOX14O95416 240 aa3.51□□□□□ -1.85
SFXN1-202ENST00000421887 TRBV12-3P01733 135 aa3.51□□□□□ -1.85
SFXN1-202ENST00000421887 ZNF137PP52743 207 aa3.51□□□□□ -1.85
SFXN1-202ENST00000421887 HCCSP53701 268 aa3.51□□□□□ -1.85
SFXN1-202ENST00000421887 LIPEQ05469 1076 aa3.51□□□□□ -1.85
SFXN1-202ENST00000421887 RSBN1Q5VWQ0 802 aaPredicted RBP3.51□□□□□ -1.85
SFXN1-202ENST00000421887 ZNF343Q6P1L6 599 aa3.51□□□□□ -1.85
SFXN1-202ENST00000421887 Q6P435 159 aa3.51□□□□□ -1.85
SFXN1-202ENST00000421887 ZNF562Q6V9R5 426 aa3.51□□□□□ -1.85
SFXN1-202ENST00000421887 RASSF6Q6ZTQ3 369 aa3.51□□□□□ -1.85
SFXN1-202ENST00000421887 TMEM179BQ7Z7N9 219 aa3.51□□□□□ -1.85
SFXN1-202ENST00000421887 LINC00596Q86U02 117 aa3.51□□□□□ -1.85
SFXN1-202ENST00000421887 TMEM61Q8N0U2 210 aa3.51□□□□□ -1.85
SFXN1-202ENST00000421887 CCDC197Q8NCU1 140 aa3.51□□□□□ -1.85
SFXN1-202ENST00000421887 CCDC54Q8NEL0 328 aa3.51□□□□□ -1.85
SFXN1-202ENST00000421887 OR5D18Q8NGL1 313 aa3.51□□□□□ -1.85
SFXN1-202ENST00000421887 OR6M1Q8NGM8 313 aa3.51□□□□□ -1.85
SFXN1-202ENST00000421887 GRPEL2Q8TAA5 225 aa3.51□□□□□ -1.85
SFXN1-202ENST00000421887 CNIH3Q8TBE1 160 aa3.51□□□□□ -1.85
SFXN1-202ENST00000421887 NEK7Q8TDX7 302 aa3.51□□□□□ -1.85
SFXN1-202ENST00000421887 PP6455Q8WZ26 134 aa3.51□□□□□ -1.85
SFXN1-202ENST00000421887 C10orf35Q96D05 121 aa3.51□□□□□ -1.85
SFXN1-202ENST00000421887 MRPL53Q96EL3 112 aaKnown RBP3.51□□□□□ -1.85
SFXN1-202ENST00000421887 RNF126Q9BV68 326 aa3.51□□□□□ -1.85
SFXN1-202ENST00000421887 TTTY10Q9BZA0 68 aa3.51□□□□□ -1.85
SFXN1-202ENST00000421887 YIPF3Q9GZM5 350 aa3.51□□□□□ -1.85
SFXN1-202ENST00000421887 ARMC1Q9NVT9 282 aa3.51□□□□□ -1.85
SFXN1-202ENST00000421887 COA4Q9NYJ1 87 aa3.51□□□□□ -1.85
SFXN1-202ENST00000421887 METTL1Q9UBP6 276 aaKnown RBP3.51□□□□□ -1.85
SFXN1-202ENST00000421887 ING4Q9UNL4 249 aa3.51□□□□□ -1.85
SFXN1-202ENST00000421887 MRPS7Q9Y2R9 242 aaKnown RBP3.51□□□□□ -1.85
SFXN1-202ENST00000421887 SELENOKQ9Y6D0 94 aa3.51□□□□□ -1.85
SFXN1-202ENST00000421887 R4GMQ9 66 aa3.51□□□□□ -1.85
SFXN1-202ENST00000421887 A0A1B0GTI1 187 aa3.5□□□□□ -1.85
SFXN1-202ENST00000421887 TMEM30CPA0ZSE6 113 aa3.5□□□□□ -1.85
SFXN1-202ENST00000421887 H3BN98 237 aa3.5□□□□□ -1.85
SFXN1-202ENST00000421887 FCN1O00602 326 aa3.5□□□□□ -1.85
SFXN1-202ENST00000421887 SLC31A2O15432 143 aa3.5□□□□□ -1.85
SFXN1-202ENST00000421887 ORC5O43913 435 aa3.5□□□□□ -1.85
SFXN1-202ENST00000421887 DFFBO76075 338 aa3.5□□□□□ -1.85
SFXN1-202ENST00000421887 RPP14O95059 124 aaKnown RBP3.5□□□□□ -1.85
SFXN1-202ENST00000421887 CA2P00918 260 aa3.5□□□□□ -1.85
SFXN1-202ENST00000421887 FABP3P05413 133 aa3.5□□□□□ -1.85
SFXN1-202ENST00000421887 MRPL3P09001 348 aaKnown RBP3.5□□□□□ -1.85
SFXN1-202ENST00000421887 DBTP11182 482 aaKnown RBP3.5□□□□□ -1.85
SFXN1-202ENST00000421887 CBLN1P23435 193 aa3.5□□□□□ -1.85
SFXN1-202ENST00000421887 HLA-DMBP28068 263 aa3.5□□□□□ -1.85
SFXN1-202ENST00000421887 FCGR2BP31994 310 aaPredicted RBP3.5□□□□□ -1.85
SFXN1-202ENST00000421887 VHLP40337 213 aa3.5□□□□□ -1.85
SFXN1-202ENST00000421887 DEFA5Q01523 94 aa3.5□□□□□ -1.85
SFXN1-202ENST00000421887 FXYD3Q14802 87 aa3.5□□□□□ -1.85
SFXN1-202ENST00000421887 LRRC37A5PQ49AS3 106 aa3.5□□□□□ -1.85
SFXN1-202ENST00000421887 ZC2HC1BQ5TFG8 222 aa3.5□□□□□ -1.85
SFXN1-202ENST00000421887 Q5VSD8 79 aa3.5□□□□□ -1.85
SFXN1-202ENST00000421887 C5orf24Q7Z6I8 188 aa3.5□□□□□ -1.85
SFXN1-202ENST00000421887 STX19Q8N4C7 294 aa3.5□□□□□ -1.85
SFXN1-202ENST00000421887 ZNF383Q8NA42 475 aa3.5□□□□□ -1.85
SFXN1-202ENST00000421887 ADAD2Q8NCV1 583 aaKnown RBP3.5□□□□□ -1.85
SFXN1-202ENST00000421887 OR9Q2Q8NGE9 314 aa3.5□□□□□ -1.85
SFXN1-202ENST00000421887 OR10V1Q8NGI7 309 aa3.5□□□□□ -1.85
SFXN1-202ENST00000421887 OR8D4Q8NGM9 314 aa3.5□□□□□ -1.85
SFXN1-202ENST00000421887 GHSRQ92847 366 aa3.5□□□□□ -1.85
SFXN1-202ENST00000421887 MRPS24Q96EL2 167 aaKnown RBP3.5□□□□□ -1.85
SFXN1-202ENST00000421887 GALNT14Q96FL9 552 aa3.5□□□□□ -1.85
SFXN1-202ENST00000421887 C7orf34Q96L11 122 aa3.5□□□□□ -1.85
SFXN1-202ENST00000421887 OPALINQ96PE5 141 aa3.5□□□□□ -1.85
SFXN1-202ENST00000421887 NEDD4LQ96PU5 975 aa3.5□□□□□ -1.85
SFXN1-202ENST00000421887 PHB2Q99623 299 aa3.5□□□□□ -1.85
SFXN1-202ENST00000421887 LITAFQ99732 161 aa3.5□□□□□ -1.85
SFXN1-202ENST00000421887 KCTD14Q9BQ13 255 aaPredicted RBP3.5□□□□□ -1.85
SFXN1-202ENST00000421887 ENOPH1Q9UHY7 261 aa3.5□□□□□ -1.85
SFXN1-202ENST00000421887 V9GYQ6 96 aa3.5□□□□□ -1.85
SFXN1-202ENST00000421887 UBR4Q5T4S7 5183 aa3.5□□□□□ -1.85
SFXN1-202ENST00000421887 DEFB131BA0A096LNP1 70 aa3.49□□□□□ -1.85
SFXN1-202ENST00000421887 IGLV9-49A0A0B4J1Y8 123 aa3.49□□□□□ -1.85
SFXN1-202ENST00000421887 TRAV25A0A0B4J276 109 aa3.49□□□□□ -1.85
SFXN1-202ENST00000421887 IGKV1-12A0A0C4DH73 117 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms