RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 FAT2Q9NYQ8 4349 aa6.04□□□□□ -1.44
VIM-202ENST00000421459 IGKV1D-13A0A0B4J2D9 117 aa6.04□□□□□ -1.44
VIM-202ENST00000421459 SMIM30A4D0T7 59 aa6.04□□□□□ -1.44
VIM-202ENST00000421459 MFSD2BA6NFX1 497 aa6.04□□□□□ -1.44
VIM-202ENST00000421459 CGB1A6NKQ9 187 aa6.04□□□□□ -1.44
VIM-202ENST00000421459 MFNGO00587 321 aa6.04□□□□□ -1.44
VIM-202ENST00000421459 MRPS14O60783 128 aaKnown RBP6.04□□□□□ -1.44
VIM-202ENST00000421459 DEDDO75618 318 aa6.04□□□□□ -1.44
VIM-202ENST00000421459 ACTL6BO94805 426 aa6.04□□□□□ -1.44
VIM-202ENST00000421459 IGLV2-14P01704 120 aa6.04□□□□□ -1.44
VIM-202ENST00000421459 IGKV1-13P0DP09 117 aa6.04□□□□□ -1.44
VIM-202ENST00000421459 HIST1H1DP16402 221 aaKnown RBP6.04□□□□□ -1.44
VIM-202ENST00000421459 ARL3P36405 182 aa6.04□□□□□ -1.44
VIM-202ENST00000421459 TPBGQ13641 420 aa6.04□□□□□ -1.44
VIM-202ENST00000421459 ZNF57Q68EA5 555 aaPredicted RBP6.04□□□□□ -1.44
VIM-202ENST00000421459 UNQ9165/PRO28630Q6UXU0 137 aa6.04□□□□□ -1.44
VIM-202ENST00000421459 SSX9Q7RTT3 188 aa6.04□□□□□ -1.44
VIM-202ENST00000421459 TSPAN14Q8NG11 270 aa6.04□□□□□ -1.44
VIM-202ENST00000421459 OR52B4Q8NGK2 314 aa6.04□□□□□ -1.44
VIM-202ENST00000421459 OSR1Q8TAX0 266 aaPredicted RBP6.04□□□□□ -1.44
VIM-202ENST00000421459 SPIN2AQ99865 258 aa6.04□□□□□ -1.44
VIM-202ENST00000421459 SPIN2BQ9BPZ2 258 aa6.04□□□□□ -1.44
VIM-202ENST00000421459 GGTLC1Q9BX51 225 aa6.04□□□□□ -1.44
VIM-202ENST00000421459 TECRQ9NZ01 308 aaKnown RBP6.04□□□□□ -1.44
VIM-202ENST00000421459 DNAH6Q9C0G6 4158 aa6.03□□□□□ -1.44
VIM-202ENST00000421459 DNAH17Q9UFH2 4485 aa6.03□□□□□ -1.44
VIM-202ENST00000421459 A0A087WXM4 84 aa6.03□□□□□ -1.44
VIM-202ENST00000421459 LOC102724200A0A096LPH7 203 aaPredicted RBP6.03□□□□□ -1.44
VIM-202ENST00000421459 LGALS9O00182 355 aa6.03□□□□□ -1.44
VIM-202ENST00000421459 ARL6IP5O75915 188 aa6.03□□□□□ -1.44
VIM-202ENST00000421459 CLEC3BP05452 202 aa6.03□□□□□ -1.44
VIM-202ENST00000421459 PTHLHP12272 177 aa6.03□□□□□ -1.44
VIM-202ENST00000421459 RPL27AP46776 148 aaKnown RBP6.03□□□□□ -1.44
VIM-202ENST00000421459 TNFRSF9Q07011 255 aa6.03□□□□□ -1.44
VIM-202ENST00000421459 ARFRP1Q13795 201 aa6.03□□□□□ -1.44
VIM-202ENST00000421459 ZNF585BQ52M93 769 aa6.03□□□□□ -1.44
VIM-202ENST00000421459 ZNF773Q6PK81 442 aa6.03□□□□□ -1.44
VIM-202ENST00000421459 KCTD9Q7L273 389 aa6.03□□□□□ -1.44
VIM-202ENST00000421459 SLC16A13Q7RTY0 426 aa6.03□□□□□ -1.44
VIM-202ENST00000421459 NR2C2APQ86WQ0 139 aa6.03□□□□□ -1.44
VIM-202ENST00000421459 GPHB5Q86YW7 130 aa6.03□□□□□ -1.44
VIM-202ENST00000421459 MMD2Q8IY49 270 aa6.03□□□□□ -1.44
VIM-202ENST00000421459 ZNF645Q8N7E2 425 aa6.03□□□□□ -1.44
VIM-202ENST00000421459 ADTRPQ96IZ2 230 aa6.03□□□□□ -1.44
VIM-202ENST00000421459 MRPS26Q9BYN8 205 aaKnown RBP6.03□□□□□ -1.44
VIM-202ENST00000421459 CCDC90BQ9GZT6 254 aa6.03□□□□□ -1.44
VIM-202ENST00000421459 OR51E2Q9H255 320 aa6.03□□□□□ -1.44
VIM-202ENST00000421459 SCN3BQ9NY72 215 aa6.03□□□□□ -1.44
VIM-202ENST00000421459 SPATA2Q9UM82 520 aa6.03□□□□□ -1.44
VIM-202ENST00000421459 RBMX2Q9Y388 322 aaKnown RBP6.03□□□□□ -1.44
VIM-202ENST00000421459 TPRKBQ9Y3C4 175 aa6.03□□□□□ -1.44
VIM-202ENST00000421459 TNCP24821 2201 aa6.03□□□□□ -1.44
VIM-202ENST00000421459 TRAV3A0A0B4J244 114 aa6.02□□□□□ -1.45
VIM-202ENST00000421459 DPPA5A6NC42 116 aa6.02□□□□□ -1.45
VIM-202ENST00000421459 NPIPB5A8MRT5 1133 aa6.02□□□□□ -1.45
VIM-202ENST00000421459 TNFSF12O43508 249 aa6.02□□□□□ -1.45
VIM-202ENST00000421459 KBTBD11O94819 623 aa6.02□□□□□ -1.45
VIM-202ENST00000421459 S1PR2O95136 353 aa6.02□□□□□ -1.45
VIM-202ENST00000421459 HLA-DQB1P01920 261 aa6.02□□□□□ -1.45
VIM-202ENST00000421459 ZNF735P0CB33 412 aa6.02□□□□□ -1.45
VIM-202ENST00000421459 RPA2P15927 270 aa6.02□□□□□ -1.45
VIM-202ENST00000421459 PSMB6P28072 239 aa6.02□□□□□ -1.45
VIM-202ENST00000421459 TALDO1P37837 337 aa6.02□□□□□ -1.45
VIM-202ENST00000421459 EIF4EBP1Q13541 118 aaPredicted RBP6.02□□□□□ -1.45
VIM-202ENST00000421459 SSX1Q16384 188 aa6.02□□□□□ -1.45
VIM-202ENST00000421459 DEFB135Q30KP9 77 aa6.02□□□□□ -1.45
VIM-202ENST00000421459 CDNFQ49AH0 187 aa6.02□□□□□ -1.45
VIM-202ENST00000421459 CEMP1Q6PRD7 247 aaPredicted RBP6.02□□□□□ -1.45
VIM-202ENST00000421459 PRSS48Q7RTY5 328 aa6.02□□□□□ -1.45
VIM-202ENST00000421459 LYG2Q86SG7 212 aa6.02□□□□□ -1.45
VIM-202ENST00000421459 SPARTQ8N0X7 666 aa6.02□□□□□ -1.45
VIM-202ENST00000421459 PUSL1Q8N0Z8 303 aaKnown RBP6.02□□□□□ -1.45
VIM-202ENST00000421459 TCTEX1D2Q8WW35 142 aa6.02□□□□□ -1.45
VIM-202ENST00000421459 OR2A7Q96R45 310 aa6.02□□□□□ -1.45
VIM-202ENST00000421459 ATG5Q9H1Y0 275 aa6.02□□□□□ -1.45
VIM-202ENST00000421459 SLC2A9Q9NRM0 540 aa6.02□□□□□ -1.45
VIM-202ENST00000421459 TAS2R8Q9NYW2 309 aa6.02□□□□□ -1.45
VIM-202ENST00000421459 ZNF257Q9Y2Q1 563 aa6.02□□□□□ -1.45
VIM-202ENST00000421459 IGHV3OR16-8A0A075B7F1 116 aa6.01□□□□□ -1.45
VIM-202ENST00000421459 IGHV3-21A0A0B4J1V1 117 aa6.01□□□□□ -1.45
VIM-202ENST00000421459 IFITM5A6NNB3 132 aa6.01□□□□□ -1.45
VIM-202ENST00000421459 SPRY2O43597 315 aa6.01□□□□□ -1.45
VIM-202ENST00000421459 RGS10O43665 173 aa6.01□□□□□ -1.45
VIM-202ENST00000421459 FCER2P06734 321 aa6.01□□□□□ -1.45
VIM-202ENST00000421459 CRYGCP07315 174 aa6.01□□□□□ -1.45
VIM-202ENST00000421459 CTRB1P17538 263 aa6.01□□□□□ -1.45
VIM-202ENST00000421459 RPL35AP18077 110 aaKnown RBP6.01□□□□□ -1.45
VIM-202ENST00000421459 GADD45AP24522 165 aa6.01□□□□□ -1.45
VIM-202ENST00000421459 GPR183P32249 361 aa6.01□□□□□ -1.45
VIM-202ENST00000421459 RPL5P46777 297 aaKnown RBP6.01□□□□□ -1.45
VIM-202ENST00000421459 ALDH3B2P48448 385 aa6.01□□□□□ -1.45
VIM-202ENST00000421459 PSMD7P51665 324 aa6.01□□□□□ -1.45
VIM-202ENST00000421459 MLLT11Q13015 90 aaPredicted RBP6.01□□□□□ -1.45
VIM-202ENST00000421459 TBCEQ15813 527 aaPredicted RBP6.01□□□□□ -1.45
VIM-202ENST00000421459 ZNF124Q15973 351 aa6.01□□□□□ -1.45
VIM-202ENST00000421459 FAM106AQ4KMX7 169 aa6.01□□□□□ -1.45
VIM-202ENST00000421459 CTRB2Q6GPI1 263 aa6.01□□□□□ -1.45
VIM-202ENST00000421459 SLC25A42Q86VD7 318 aa6.01□□□□□ -1.45
VIM-202ENST00000421459 MFSD4AQ8N468 514 aa6.01□□□□□ -1.45
VIM-202ENST00000421459 TMEM167AQ8TBQ9 72 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms