RNA–Protein interactions for RNA: ENST00000421431.1

UBL4A-204, Transcript of ubiquitin like 4A, humanhuman

TSL 5

Gene UBL4A, Length 1,652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4A-204ENST00000421431 KCNAB3O43448 404 aa12.8□□□□□ -0.36
UBL4A-204ENST00000421431 SAA1P0DJI8 122 aaPredicted RBP12.8□□□□□ -0.36
UBL4A-204ENST00000421431 CXCL2P19875 107 aa12.8□□□□□ -0.36
UBL4A-204ENST00000421431 LGALSLQ3ZCW2 172 aaPredicted RBP12.8□□□□□ -0.36
UBL4A-204ENST00000421431 AARDQ4LEZ3 155 aa12.8□□□□□ -0.36
UBL4A-204ENST00000421431 TMEM65Q6PI78 240 aa12.8□□□□□ -0.36
UBL4A-204ENST00000421431 PUSL1Q8N0Z8 303 aaKnown RBP12.8□□□□□ -0.36
UBL4A-204ENST00000421431 MALSU1Q96EH3 234 aa12.8□□□□□ -0.36
UBL4A-204ENST00000421431 SMR3AQ99954 134 aa12.8□□□□□ -0.36
UBL4A-204ENST00000421431 MS4A7Q9GZW8 240 aaPredicted RBP12.8□□□□□ -0.36
UBL4A-204ENST00000421431 MAGT1Q9H0U3 335 aa12.8□□□□□ -0.36
UBL4A-204ENST00000421431 PLSCR3Q9NRY6 295 aa12.8□□□□□ -0.36
UBL4A-204ENST00000421431 TNFSF18Q9UNG2 199 aa12.8□□□□□ -0.36
UBL4A-204ENST00000421431 BOLA1Q9Y3E2 137 aa12.8□□□□□ -0.36
UBL4A-204ENST00000421431 CD1BP29016 333 aa12.8□□□□□ -0.36
UBL4A-204ENST00000421431 OR2B8PP59922 312 aa12.8□□□□□ -0.36
UBL4A-204ENST00000421431 RPS16P62249 146 aaKnown RBP12.8□□□□□ -0.36
UBL4A-204ENST00000421431 BRD3OSQ6XYD6 125 aa12.8□□□□□ -0.36
UBL4A-204ENST00000421431 QTRT1Q9BXR0 403 aaKnown RBP12.8□□□□□ -0.36
UBL4A-204ENST00000421431 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.8□□□□□ -0.36
UBL4A-204ENST00000421431 RNF222A6NCQ9 220 aa12.79□□□□□ -0.36
UBL4A-204ENST00000421431 J3QLI3 93 aa12.79□□□□□ -0.36
UBL4A-204ENST00000421431 PET100P0DJ07 73 aa12.79□□□□□ -0.36
UBL4A-204ENST00000421431 CNTFRP26992 372 aa12.79□□□□□ -0.36
UBL4A-204ENST00000421431 ARHGDIBP52566 201 aa12.79□□□□□ -0.36
UBL4A-204ENST00000421431 GPR157Q5UAW9 335 aa12.79□□□□□ -0.36
UBL4A-204ENST00000421431 CCDC144NLQ6NUI1 221 aa12.79□□□□□ -0.36
UBL4A-204ENST00000421431 Q71RC1 249 aaPredicted RBP12.79□□□□□ -0.36
UBL4A-204ENST00000421431 ZNF546Q86UE3 836 aa12.79□□□□□ -0.36
UBL4A-204ENST00000421431 DCUN1D4Q92564 292 aa12.79□□□□□ -0.36
UBL4A-204ENST00000421431 BET1LQ9NYM9 111 aa12.79□□□□□ -0.36
UBL4A-204ENST00000421431 HSPB7Q9UBY9 170 aa12.79□□□□□ -0.36
UBL4A-204ENST00000421431 TMEM50AO95807 157 aa12.78□□□□□ -0.36
UBL4A-204ENST00000421431 CD24P25063 80 aa12.78□□□□□ -0.36
UBL4A-204ENST00000421431 TNFRSF9Q07011 255 aa12.78□□□□□ -0.36
UBL4A-204ENST00000421431 ZFP57Q9NU63 452 aa12.78□□□□□ -0.36
UBL4A-204ENST00000421431 WNK2Q9Y3S1 2297 aa12.78□□□□□ -0.36
UBL4A-204ENST00000421431 MSGN1A6NI15 193 aa12.77□□□□□ -0.36
UBL4A-204ENST00000421431 C15orf61A6NNL5 157 aa12.77□□□□□ -0.36
UBL4A-204ENST00000421431 FAM90A26D6RGX4 464 aa12.77□□□□□ -0.36
UBL4A-204ENST00000421431 UPK2O00526 184 aa12.77□□□□□ -0.36
UBL4A-204ENST00000421431 SSSCA1O60232 199 aa12.77□□□□□ -0.36
UBL4A-204ENST00000421431 KBTBD11O94819 623 aa12.77□□□□□ -0.36
UBL4A-204ENST00000421431 IGKV1D-33P01593 117 aa12.77□□□□□ -0.36
UBL4A-204ENST00000421431 IGKV1-33P01594 117 aa12.77□□□□□ -0.36
UBL4A-204ENST00000421431 MRGPRG-AS1Q2M3A8 158 aa12.77□□□□□ -0.36
UBL4A-204ENST00000421431 KRTAP21-3Q3LHN1 58 aa12.77□□□□□ -0.36
UBL4A-204ENST00000421431 CYB5R2Q6BCY4 276 aa12.77□□□□□ -0.36
UBL4A-204ENST00000421431 AIFM2Q9BRQ8 373 aa12.77□□□□□ -0.36
UBL4A-204ENST00000421431 TPSG1Q9NRR2 321 aa12.77□□□□□ -0.36
UBL4A-204ENST00000421431 TMEM14BQ9NUH8 114 aa12.77□□□□□ -0.36
UBL4A-204ENST00000421431 HSPB11Q9Y547 144 aa12.77□□□□□ -0.36
UBL4A-204ENST00000421431 SOX21Q9Y651 276 aaPredicted RBP12.77□□□□□ -0.36
UBL4A-204ENST00000421431 NSD1Q96L73 2696 aaPredicted RBP12.77□□□□□ -0.37
UBL4A-204ENST00000421431 SMAD7O15105 426 aaKnown RBP12.77□□□□□ -0.37
UBL4A-204ENST00000421431 CHST1O43916 411 aa12.77□□□□□ -0.37
UBL4A-204ENST00000421431 RLN2P04090 185 aa12.77□□□□□ -0.37
UBL4A-204ENST00000421431 CRYGBP07316 175 aa12.77□□□□□ -0.37
UBL4A-204ENST00000421431 SNRNP70P08621 437 aaKnown RBP12.77□□□□□ -0.37
UBL4A-204ENST00000421431 MYOD1P15172 320 aa12.77□□□□□ -0.37
UBL4A-204ENST00000421431 LGALS7P47929 136 aa12.77□□□□□ -0.37
UBL4A-204ENST00000421431 PAX9P55771 341 aa12.77□□□□□ -0.37
UBL4A-204ENST00000421431 UBE2KP61086 200 aa12.77□□□□□ -0.37
UBL4A-204ENST00000421431 ZNF429Q86V71 674 aa12.77□□□□□ -0.37
UBL4A-204ENST00000421431 OR4A16Q8NH70 328 aa12.77□□□□□ -0.37
UBL4A-204ENST00000421431 TMEM167AQ8TBQ9 72 aa12.77□□□□□ -0.37
UBL4A-204ENST00000421431 MFFQ9GZY8 342 aa12.77□□□□□ -0.37
UBL4A-204ENST00000421431 RBKSQ9H477 322 aa12.77□□□□□ -0.37
UBL4A-204ENST00000421431 FOXA2Q9Y261 457 aaPredicted RBP12.77□□□□□ -0.37
UBL4A-204ENST00000421431 A0A0U1RQK1 487 aa12.76□□□□□ -0.37
UBL4A-204ENST00000421431 E5RGE8 158 aa12.76□□□□□ -0.37
UBL4A-204ENST00000421431 SYNGR2O43760 224 aa12.76□□□□□ -0.37
UBL4A-204ENST00000421431 SLC25A17O43808 307 aa12.76□□□□□ -0.37
UBL4A-204ENST00000421431 RBMXL2O75526 392 aaKnown RBP12.76□□□□□ -0.37
UBL4A-204ENST00000421431 EBI3Q14213 229 aa12.76□□□□□ -0.37
UBL4A-204ENST00000421431 ZDHHC16Q969W1 377 aa12.76□□□□□ -0.37
UBL4A-204ENST00000421431 EAF1Q96JC9 268 aaPredicted RBP12.76□□□□□ -0.37
UBL4A-204ENST00000421431 RNF5Q99942 180 aa12.76□□□□□ -0.37
UBL4A-204ENST00000421431 SNAPC5O75971 98 aa12.75□□□□□ -0.37
UBL4A-204ENST00000421431 MOSP00540 346 aa12.75□□□□□ -0.37
UBL4A-204ENST00000421431 FSHBP01225 129 aa12.75□□□□□ -0.37
UBL4A-204ENST00000421431 HKR1P10072 659 aa12.75□□□□□ -0.37
UBL4A-204ENST00000421431 IAPPP10997 89 aa12.75□□□□□ -0.37
UBL4A-204ENST00000421431 F2RL1P55085 397 aa12.75□□□□□ -0.37
UBL4A-204ENST00000421431 PSG5Q15238 335 aa12.75□□□□□ -0.37
UBL4A-204ENST00000421431 VMA21Q3ZAQ7 101 aa12.75□□□□□ -0.37
UBL4A-204ENST00000421431 PDLIM3Q53GG5 364 aaPredicted RBP12.75□□□□□ -0.37
UBL4A-204ENST00000421431 SPINK9Q5DT21 86 aa12.75□□□□□ -0.37
UBL4A-204ENST00000421431 FAM120AOSQ5T036 256 aa12.75□□□□□ -0.37
UBL4A-204ENST00000421431 Q8N6K4 173 aa12.75□□□□□ -0.37
UBL4A-204ENST00000421431 VSTM2AQ8TAG5 236 aa12.75□□□□□ -0.37
UBL4A-204ENST00000421431 DNHD1Q96M86 4753 aa12.75□□□□□ -0.37
UBL4A-204ENST00000421431 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.75□□□□□ -0.371e-5■■■■□ 21.5
UBL4A-204ENST00000421431 L7N2F9 121 aa12.74□□□□□ -0.37
UBL4A-204ENST00000421431 WRBO00258 174 aa12.74□□□□□ -0.37
UBL4A-204ENST00000421431 P2RY1P47900 373 aa12.74□□□□□ -0.37
UBL4A-204ENST00000421431 AP2S1P53680 142 aaPredicted RBP12.74□□□□□ -0.37
UBL4A-204ENST00000421431 KRTAP1-1Q07627 177 aa12.74□□□□□ -0.37
UBL4A-204ENST00000421431 HNF4GQ14541 408 aa12.74□□□□□ -0.37
UBL4A-204ENST00000421431 ZNF345Q14585 488 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms