RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 EGR4Q05215 589 aa10.53□□□□□ -0.72
CLCN4-203ENST00000421085 FBLN7Q53RD9 439 aa10.53□□□□□ -0.72
CLCN4-203ENST00000421085 ZNF324BQ6AW86 544 aaPredicted RBP10.53□□□□□ -0.72
CLCN4-203ENST00000421085 DEFB123Q8N688 67 aa10.53□□□□□ -0.72
CLCN4-203ENST00000421085 MEGF9Q9H1U4 602 aa10.53□□□□□ -0.72
CLCN4-203ENST00000421085 CRYBA2P53672 197 aa10.53□□□□□ -0.72
CLCN4-203ENST00000421085 MEF2CQ06413 473 aaPredicted RBP10.53□□□□□ -0.72
CLCN4-203ENST00000421085 ICAM4Q14773 271 aa10.53□□□□□ -0.72
CLCN4-203ENST00000421085 PRELID3AQ96N28 172 aa10.53□□□□□ -0.72
CLCN4-203ENST00000421085 ATXN7O15265 892 aaPredicted RBP10.53□□□□□ -0.72
CLCN4-203ENST00000421085 NEUROG1Q92886 237 aa10.53□□□□□ -0.72
CLCN4-203ENST00000421085 JPT1Q9UK76 154 aa10.53□□□□□ -0.72
CLCN4-203ENST00000421085 C21orf140B9A014 251 aa10.52□□□□□ -0.72
CLCN4-203ENST00000421085 STAG3L3P0CL85 134 aa10.52□□□□□ -0.72
CLCN4-203ENST00000421085 RIPPLY3P57055 190 aa10.52□□□□□ -0.72
CLCN4-203ENST00000421085 DCAF10Q5QP82 559 aa10.52□□□□□ -0.72
CLCN4-203ENST00000421085 OR4C13Q8NGP0 309 aa10.52□□□□□ -0.72
CLCN4-203ENST00000421085 F5P12259 2224 aa10.52□□□□□ -0.72
CLCN4-203ENST00000421085 MFAP4P55083 255 aa10.52□□□□□ -0.72
CLCN4-203ENST00000421085 PEAR1Q5VY43 1037 aaPredicted RBP10.52□□□□□ -0.72
CLCN4-203ENST00000421085 PCSK4Q6UW60 755 aa10.52□□□□□ -0.72
CLCN4-203ENST00000421085 NR2C2APQ86WQ0 139 aa10.52□□□□□ -0.72
CLCN4-203ENST00000421085 C1orf174Q8IYL3 243 aa10.52□□□□□ -0.72
CLCN4-203ENST00000421085 FNDC4Q9H6D8 234 aaPredicted RBP10.52□□□□□ -0.72
CLCN4-203ENST00000421085 KIAA1217Q5T5P2 1943 aa10.52□□□□□ -0.73
CLCN4-203ENST00000421085 C17orf51A8MQB3 221 aa10.52□□□□□ -0.73
CLCN4-203ENST00000421085 MOSP00540 346 aa10.52□□□□□ -0.73
CLCN4-203ENST00000421085 GPX4P36969 197 aaPredicted RBP10.52□□□□□ -0.73
CLCN4-203ENST00000421085 MESP2Q0VG99 397 aa10.52□□□□□ -0.73
CLCN4-203ENST00000421085 MEIG1Q5JSS6 88 aa10.52□□□□□ -0.73
CLCN4-203ENST00000421085 GATAD1Q8WUU5 269 aa10.52□□□□□ -0.73
CLCN4-203ENST00000421085 A6NNC1 897 aa10.52□□□□□ -0.73
CLCN4-203ENST00000421085 C16orf97H3BN30 126 aa10.52□□□□□ -0.73
CLCN4-203ENST00000421085 UBTD1Q9HAC8 227 aa10.52□□□□□ -0.73
CLCN4-203ENST00000421085 LPAR2Q9HBW0 351 aa10.52□□□□□ -0.73
CLCN4-203ENST00000421085 TGFAP01135 160 aa10.52□□□□□ -0.73
CLCN4-203ENST00000421085 IGKV3D-11A0A0A0MRZ8 115 aa10.51□□□□□ -0.73
CLCN4-203ENST00000421085 IGHV1-45A0A0A0MS14 117 aa10.51□□□□□ -0.73
CLCN4-203ENST00000421085 A0A1W2PQF6 199 aa10.51□□□□□ -0.73
CLCN4-203ENST00000421085 IGKV3-11P04433 115 aa10.51□□□□□ -0.73
CLCN4-203ENST00000421085 RSPO4Q2I0M5 234 aaPredicted RBP10.51□□□□□ -0.73
CLCN4-203ENST00000421085 SLC25A28Q96A46 364 aa10.51□□□□□ -0.73
CLCN4-203ENST00000421085 PRDM14Q9GZV8 571 aa10.51□□□□□ -0.73
CLCN4-203ENST00000421085 ADRA2AP08913 450 aa10.51□□□□□ -0.73
CLCN4-203ENST00000421085 GPR183P32249 361 aa10.51□□□□□ -0.73
CLCN4-203ENST00000421085 TRIP6Q15654 476 aaKnown RBP10.51□□□□□ -0.73
CLCN4-203ENST00000421085 TMEM170BQ5T4T1 132 aa10.51□□□□□ -0.73
CLCN4-203ENST00000421085 COPS9Q8WXC6 57 aa10.51□□□□□ -0.73
CLCN4-203ENST00000421085 ADAMTSL3P82987 1691 aa10.51□□□□□ -0.73
CLCN4-203ENST00000421085 A0A1B0GTI1 187 aa10.51□□□□□ -0.73
CLCN4-203ENST00000421085 CTHRC1Q96CG8 243 aa10.51□□□□□ -0.73
CLCN4-203ENST00000421085 CRISPLD2Q9H0B8 497 aa10.51□□□□□ -0.73
CLCN4-203ENST00000421085 PPP1R17O96001 155 aa10.51□□□□□ -0.73
CLCN4-203ENST00000421085 SLC22A18ASQ8N1D0 253 aa10.51□□□□□ -0.73
CLCN4-203ENST00000421085 ANKRD31Q8N7Z5 1873 aa10.51□□□□□ -0.73
CLCN4-203ENST00000421085 TRAV9-1A0A075B6T8 112 aa10.5□□□□□ -0.73
CLCN4-203ENST00000421085 LY6G6FQ5SQ64 297 aa10.5□□□□□ -0.73
CLCN4-203ENST00000421085 FAM74A4Q5TZK3 123 aa10.5□□□□□ -0.73
CLCN4-203ENST00000421085 KIR2DL4Q99706 377 aa10.5□□□□□ -0.73
CLCN4-203ENST00000421085 FOXC2Q99958 501 aa10.5□□□□□ -0.73
CLCN4-203ENST00000421085 TMEM106BQ9NUM4 274 aa10.5□□□□□ -0.73
CLCN4-203ENST00000421085 ARFGEF1Q9Y6D6 1849 aa10.5□□□□□ -0.73
CLCN4-203ENST00000421085 TRAV30A0A087WSZ9 112 aa10.5□□□□□ -0.73
CLCN4-203ENST00000421085 TM2D1Q9BX74 207 aa10.5□□□□□ -0.73
CLCN4-203ENST00000421085 ACSF3Q4G176 576 aaPredicted RBP10.5□□□□□ -0.73
CLCN4-203ENST00000421085 SRXN1Q9BYN0 137 aa10.5□□□□□ -0.73
CLCN4-203ENST00000421085 A0A1W2PS18 150 aa10.5□□□□□ -0.73
CLCN4-203ENST00000421085 SMIM10L1P0DMW3 83 aa10.5□□□□□ -0.73
CLCN4-203ENST00000421085 IGFBP2P18065 325 aa10.5□□□□□ -0.73
CLCN4-203ENST00000421085 SMIM10Q96HG1 83 aa10.5□□□□□ -0.73
CLCN4-203ENST00000421085 MUC21A0A0G2JKD1 596 aa10.5□□□□□ -0.73
CLCN4-203ENST00000421085 MUC21A0A140T8X8 626 aa10.5□□□□□ -0.73
CLCN4-203ENST00000421085 IZUMO1RA6ND01 250 aa10.5□□□□□ -0.73
CLCN4-203ENST00000421085 DNAL4O96015 105 aa10.5□□□□□ -0.73
CLCN4-203ENST00000421085 GPX1P07203 203 aa10.5□□□□□ -0.73
CLCN4-203ENST00000421085 CTSBP07858 339 aa10.5□□□□□ -0.73
CLCN4-203ENST00000421085 IFI6P09912 130 aa10.5□□□□□ -0.73
CLCN4-203ENST00000421085 PTGDSP41222 190 aa10.5□□□□□ -0.73
CLCN4-203ENST00000421085 MUC21Q5SSG8 566 aa10.5□□□□□ -0.73
CLCN4-203ENST00000421085 LDLRAD2Q5SZI1 272 aa10.5□□□□□ -0.73
CLCN4-203ENST00000421085 HEPN1Q6WQI6 88 aa10.5□□□□□ -0.73
CLCN4-203ENST00000421085 FAM214BQ7L5A3 538 aa10.5□□□□□ -0.73
CLCN4-203ENST00000421085 PTPRFP10586 1907 aa10.5□□□□□ -0.73
CLCN4-203ENST00000421085 FOXI3A8MTJ6 420 aaPredicted RBP10.5□□□□□ -0.73
CLCN4-203ENST00000421085 PEX7O00628 323 aa10.5□□□□□ -0.73
CLCN4-203ENST00000421085 RPL39P5Q59GN2 51 aa10.5□□□□□ -0.73
CLCN4-203ENST00000421085 C1orf210Q8IVY1 113 aa10.5□□□□□ -0.73
CLCN4-203ENST00000421085 C5orf30Q96GV9 206 aa10.5□□□□□ -0.73
CLCN4-203ENST00000421085 HIST1H2BLQ99880 126 aa10.5□□□□□ -0.73
CLCN4-203ENST00000421085 LOC390937A0A1W2PQ73 354 aa10.49□□□□□ -0.73
CLCN4-203ENST00000421085 F8VVB4 439 aa10.49□□□□□ -0.73
CLCN4-203ENST00000421085 F8VWA3 439 aa10.49□□□□□ -0.73
CLCN4-203ENST00000421085 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.49□□□□□ -0.73
CLCN4-203ENST00000421085 UNQ5815/PRO19632Q6UWF5 114 aa10.49□□□□□ -0.73
CLCN4-203ENST00000421085 PROB1E7EW31 1015 aa10.49□□□□□ -0.73
CLCN4-203ENST00000421085 APOMO95445 188 aa10.49□□□□□ -0.73
CLCN4-203ENST00000421085 UCP1P25874 307 aa10.49□□□□□ -0.73
CLCN4-203ENST00000421085 GEMIN7Q9H840 131 aaKnown RBP10.49□□□□□ -0.73
CLCN4-203ENST00000421085 DOCK5Q9H7D0 1870 aa10.49□□□□□ -0.73
CLCN4-203ENST00000421085 FGF16O43320 207 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms