RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 OR2J3O76001 311 aa13.14□□□□□ -0.31
MSH6-203ENST00000420813 RPL27AP46776 148 aaKnown RBP13.14□□□□□ -0.31
MSH6-203ENST00000420813 MSMO1Q15800 293 aa13.14□□□□□ -0.31
MSH6-203ENST00000420813 CD300EQ496F6 205 aaPredicted RBP13.14□□□□□ -0.31
MSH6-203ENST00000420813 ZFAND6Q6FIF0 208 aa13.14□□□□□ -0.31
MSH6-203ENST00000420813 ADAMTSL5Q6ZMM2 481 aa13.14□□□□□ -0.31
MSH6-203ENST00000420813 VKORC1L1Q8N0U8 176 aa13.14□□□□□ -0.31
MSH6-203ENST00000420813 SLC2A9Q9NRM0 540 aa13.14□□□□□ -0.31
MSH6-203ENST00000420813 RHBDL2Q9NX52 303 aa13.14□□□□□ -0.31
MSH6-203ENST00000420813 SPATA2Q9UM82 520 aa13.14□□□□□ -0.31
MSH6-203ENST00000420813 DMRT1Q9Y5R6 373 aa13.14□□□□□ -0.31
MSH6-203ENST00000420813 LYSTQ99698 3801 aa13.14□□□□□ -0.31
MSH6-203ENST00000420813 DPPA5A6NC42 116 aa13.13□□□□□ -0.31
MSH6-203ENST00000420813 HMX3A6NHT5 357 aa13.13□□□□□ -0.31
MSH6-203ENST00000420813 LGALS9O00182 355 aa13.13□□□□□ -0.31
MSH6-203ENST00000420813 GGCTO75223 188 aaKnown RBP13.13□□□□□ -0.31
MSH6-203ENST00000420813 HRASP01112 189 aa13.13□□□□□ -0.31
MSH6-203ENST00000420813 IL6RP08887 468 aaPredicted RBP13.13□□□□□ -0.31
MSH6-203ENST00000420813 ZNF735P0CB33 412 aa13.13□□□□□ -0.31
MSH6-203ENST00000420813 KIR2DS2P43631 304 aa13.13□□□□□ -0.31
MSH6-203ENST00000420813 BRWD1-AS2P59051 145 aa13.13□□□□□ -0.31
MSH6-203ENST00000420813 CD81P60033 236 aa13.13□□□□□ -0.31
MSH6-203ENST00000420813 KLK9Q2XQG4 91 aa13.13□□□□□ -0.31
MSH6-203ENST00000420813 KCTD21Q4G0X4 260 aa13.13□□□□□ -0.31
MSH6-203ENST00000420813 LINC00322Q6ZN03 302 aaPredicted RBP13.13□□□□□ -0.31
MSH6-203ENST00000420813 MFSD4AQ8N468 514 aa13.13□□□□□ -0.31
MSH6-203ENST00000420813 DYNLRB2Q8TF09 96 aa13.13□□□□□ -0.31
MSH6-203ENST00000420813 BATF3Q9NR55 127 aa13.13□□□□□ -0.31
MSH6-203ENST00000420813 SLC2A8Q9NY64 477 aa13.13□□□□□ -0.31
MSH6-203ENST00000420813 KLK9Q9UKQ9 250 aa13.13□□□□□ -0.31
MSH6-203ENST00000420813 CEPT1Q9Y6K0 416 aa13.13□□□□□ -0.31
MSH6-203ENST00000420813 C2orf70A6NJV1 201 aa13.12□□□□□ -0.31
MSH6-203ENST00000420813 TPPPO94811 219 aa13.12□□□□□ -0.31
MSH6-203ENST00000420813 DHFRP00374 187 aa13.12□□□□□ -0.31
MSH6-203ENST00000420813 CRYGCP07315 174 aa13.12□□□□□ -0.31
MSH6-203ENST00000420813 DEFB114Q30KQ6 69 aa13.12□□□□□ -0.31
MSH6-203ENST00000420813 FYTTD1Q96QD9 318 aaKnown RBP13.12□□□□□ -0.31
MSH6-203ENST00000420813 NEURL2Q9BR09 285 aa13.12□□□□□ -0.31
MSH6-203ENST00000420813 AIFM2Q9BRQ8 373 aa13.12□□□□□ -0.31
MSH6-203ENST00000420813 YTHDF1Q9BYJ9 559 aaKnown RBP13.12□□□□□ -0.31
MSH6-203ENST00000420813 ZC4H2Q9NQZ6 224 aa13.12□□□□□ -0.31
MSH6-203ENST00000420813 TAS2R8Q9NYW2 309 aa13.12□□□□□ -0.31
MSH6-203ENST00000420813 TECRQ9NZ01 308 aaKnown RBP13.12□□□□□ -0.31
MSH6-203ENST00000420813 FBXL7Q9UJT9 491 aa13.12□□□□□ -0.31
MSH6-203ENST00000420813 ETV7Q9Y603 341 aa13.12□□□□□ -0.31
MSH6-203ENST00000420813 A0A0A6YYH2 397 aa13.11□□□□□ -0.31
MSH6-203ENST00000420813 A6NJ64 397 aa13.11□□□□□ -0.31
MSH6-203ENST00000420813 ZNF785A8K8V0 405 aa13.11□□□□□ -0.31
MSH6-203ENST00000420813 PPP5D1E7EU14 171 aa13.11□□□□□ -0.31
MSH6-203ENST00000420813 E7EUB6 86 aa13.11□□□□□ -0.31
MSH6-203ENST00000420813 PSMB6P28072 239 aa13.11□□□□□ -0.31
MSH6-203ENST00000420813 SDC2P34741 201 aa13.11□□□□□ -0.31
MSH6-203ENST00000420813 ARPC4P59998 168 aa13.11□□□□□ -0.31
MSH6-203ENST00000420813 GPHB5Q86YW7 130 aa13.11□□□□□ -0.31
MSH6-203ENST00000420813 ZBTB34Q8NCN2 500 aa13.11□□□□□ -0.31
MSH6-203ENST00000420813 BEST4Q8NFU0 473 aa13.11□□□□□ -0.31
MSH6-203ENST00000420813 OR4A5Q8NH83 315 aa13.11□□□□□ -0.31
MSH6-203ENST00000420813 FANCD2OSQ96PS1 177 aa13.11□□□□□ -0.31
MSH6-203ENST00000420813 MRPS26Q9BYN8 205 aaKnown RBP13.11□□□□□ -0.31
MSH6-203ENST00000420813 PLEKHA3Q9HB20 300 aa13.11□□□□□ -0.31
MSH6-203ENST00000420813 A0A1B0GW64 132 aa13.1□□□□□ -0.31
MSH6-203ENST00000420813 RBFOX2O43251 390 aaKnown RBP eCLIP13.1□□□□□ -0.314e-10■□□□□ 8.3
MSH6-203ENST00000420813 FOLR2P14207 255 aa13.1□□□□□ -0.31
MSH6-203ENST00000420813 HIST1H1BP16401 226 aaKnown RBP13.1□□□□□ -0.31
MSH6-203ENST00000420813 CTRB1P17538 263 aa13.1□□□□□ -0.31
MSH6-203ENST00000420813 RPL8P62917 257 aaKnown RBP13.1□□□□□ -0.31
MSH6-203ENST00000420813 CTRB2Q6GPI1 263 aa13.1□□□□□ -0.31
MSH6-203ENST00000420813 HOGA1Q86XE5 327 aa13.1□□□□□ -0.31
MSH6-203ENST00000420813 OR13F1Q8NGS4 319 aa13.1□□□□□ -0.31
MSH6-203ENST00000420813 SLC25A38Q96DW6 304 aa13.1□□□□□ -0.31
MSH6-203ENST00000420813 CCDC140Q96MF4 163 aa13.1□□□□□ -0.31
MSH6-203ENST00000420813 HIPK2Q9H2X6 1198 aa13.1□□□□□ -0.31
MSH6-203ENST00000420813 BET1LQ9NYM9 111 aa13.1□□□□□ -0.31
MSH6-203ENST00000420813 NDUFB8O95169 186 aa13.09□□□□□ -0.31
MSH6-203ENST00000420813 OR2C1O95371 312 aa13.09□□□□□ -0.31
MSH6-203ENST00000420813 HLA-AP01891 365 aaKnown RBP13.09□□□□□ -0.31
MSH6-203ENST00000420813 CD7P09564 240 aa13.09□□□□□ -0.31
MSH6-203ENST00000420813 SMIM18P0DKX4 95 aa13.09□□□□□ -0.31
MSH6-203ENST00000420813 AREGP15514 252 aa13.09□□□□□ -0.31
MSH6-203ENST00000420813 HLA-GP17693 338 aa13.09□□□□□ -0.31
MSH6-203ENST00000420813 FCGR2CP31995 323 aa13.09□□□□□ -0.31
MSH6-203ENST00000420813 ARL3P36405 182 aa13.09□□□□□ -0.31
MSH6-203ENST00000420813 TIMM50Q3ZCQ8 353 aa13.09□□□□□ -0.31
MSH6-203ENST00000420813 C19orf35Q6ZS72 473 aa13.09□□□□□ -0.31
MSH6-203ENST00000420813 SECTM1Q8WVN6 248 aa13.09□□□□□ -0.31
MSH6-203ENST00000420813 EEF1AKMT3Q96AZ1 226 aa13.09□□□□□ -0.31
MSH6-203ENST00000420813 CCL28Q9NRJ3 127 aa13.09□□□□□ -0.31
MSH6-203ENST00000420813 TRAV18A0A075B6X5 111 aa13.08□□□□□ -0.32
MSH6-203ENST00000420813 A8MWP6 167 aa13.08□□□□□ -0.32
MSH6-203ENST00000420813 TMEM127O75204 238 aa13.08□□□□□ -0.32
MSH6-203ENST00000420813 PPYP01298 95 aa13.08□□□□□ -0.32
MSH6-203ENST00000420813 MXD1Q05195 221 aa13.08□□□□□ -0.32
MSH6-203ENST00000420813 CATR1Q13166 79 aa13.08□□□□□ -0.32
MSH6-203ENST00000420813 POU2AF1Q16633 256 aa13.08□□□□□ -0.32
MSH6-203ENST00000420813 OR4A47Q6IF82 309 aa13.08□□□□□ -0.32
MSH6-203ENST00000420813 ZNF773Q6PK81 442 aa13.08□□□□□ -0.32
MSH6-203ENST00000420813 CLEC19AQ6UXS0 136 aa13.08□□□□□ -0.32
MSH6-203ENST00000420813 SSX9Q7RTT3 188 aa13.08□□□□□ -0.32
MSH6-203ENST00000420813 SPAG16Q8N0X2 631 aa13.08□□□□□ -0.32
MSH6-203ENST00000420813 GVQW1Q8N7I0 195 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms