RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 DVL1O14640 695 aa7.21□□□□□ -1.25
SNCA-206ENST00000420646 RAB29O14966 203 aa7.21□□□□□ -1.25
SNCA-206ENST00000420646 NDUFS6O75380 124 aaKnown RBP7.21□□□□□ -1.25
SNCA-206ENST00000420646 SNAPINO95295 136 aa7.21□□□□□ -1.25
SNCA-206ENST00000420646 HPRT1P00492 218 aa7.21□□□□□ -1.25
SNCA-206ENST00000420646 IFNA10P01566 189 aa7.21□□□□□ -1.25
SNCA-206ENST00000420646 PEA15Q15121 130 aa7.21□□□□□ -1.25
SNCA-206ENST00000420646 AWAT1Q58HT5 328 aa7.21□□□□□ -1.25
SNCA-206ENST00000420646 NCMAPQ5T1S8 102 aa7.21□□□□□ -1.25
SNCA-206ENST00000420646 ACSM6Q6P461 480 aa7.21□□□□□ -1.25
SNCA-206ENST00000420646 TRAT1Q6PIZ9 186 aa7.21□□□□□ -1.25
SNCA-206ENST00000420646 RPP25LQ8N5L8 163 aaKnown RBP7.21□□□□□ -1.25
SNCA-206ENST00000420646 OR4A16Q8NH70 328 aa7.21□□□□□ -1.25
SNCA-206ENST00000420646 TAF15Q92804 592 aaKnown RBP eCLIP7.21□□□□□ -1.25
SNCA-206ENST00000420646 NAV3Q8IVL0 2385 aa7.21□□□□□ -1.25
SNCA-206ENST00000420646 SMCO3A2RU48 225 aa7.21□□□□□ -1.26
SNCA-206ENST00000420646 C15orf62A8K5M9 175 aa7.21□□□□□ -1.26
SNCA-206ENST00000420646 SOX15O60248 233 aa7.21□□□□□ -1.26
SNCA-206ENST00000420646 TEX36Q5VZQ5 186 aa7.21□□□□□ -1.26
SNCA-206ENST00000420646 ZFP82Q8N141 532 aa7.21□□□□□ -1.26
SNCA-206ENST00000420646 CYB561D1Q8N8Q1 229 aa7.21□□□□□ -1.26
SNCA-206ENST00000420646 GATAD1Q8WUU5 269 aa7.21□□□□□ -1.26
SNCA-206ENST00000420646 TMEM170AQ8WVE7 144 aa7.21□□□□□ -1.26
SNCA-206ENST00000420646 DDB2Q92466 427 aa7.21□□□□□ -1.26
SNCA-206ENST00000420646 RCC1LQ96I51 464 aaKnown RBP7.21□□□□□ -1.26
SNCA-206ENST00000420646 SLC25A22Q9H936 323 aa7.21□□□□□ -1.26
SNCA-206ENST00000420646 HEYLQ9NQ87 328 aaPredicted RBP7.21□□□□□ -1.26
SNCA-206ENST00000420646 IDI2-AS1Q9NZ38 188 aa7.21□□□□□ -1.26
SNCA-206ENST00000420646 CT45A6P0DMU7 189 aa7.21□□□□□ -1.26
SNCA-206ENST00000420646 CT45A5P0DMU8 189 aa7.21□□□□□ -1.26
SNCA-206ENST00000420646 CT45A7P0DMV0 189 aa7.21□□□□□ -1.26
SNCA-206ENST00000420646 PAX6P26367 422 aa7.21□□□□□ -1.26
SNCA-206ENST00000420646 ADORA2A-AS1P86434 159 aa7.21□□□□□ -1.26
SNCA-206ENST00000420646 RELBQ01201 579 aa7.21□□□□□ -1.26
SNCA-206ENST00000420646 AVPI1Q5T686 147 aa7.21□□□□□ -1.26
SNCA-206ENST00000420646 OR4A47Q6IF82 309 aa7.21□□□□□ -1.26
SNCA-206ENST00000420646 ZNF439Q8NDP4 499 aa7.21□□□□□ -1.26
SNCA-206ENST00000420646 OR10P1Q8NGE3 313 aa7.21□□□□□ -1.26
SNCA-206ENST00000420646 BBC3Q96PG8 261 aaPredicted RBP7.21□□□□□ -1.26
SNCA-206ENST00000420646 SLC35B3Q9H1N7 401 aa7.21□□□□□ -1.26
SNCA-206ENST00000420646 CCDC168Q8NDH2 2452 aa7.2□□□□□ -1.26
SNCA-206ENST00000420646 TRAV38-1A0A0B4J264 116 aa7.2□□□□□ -1.26
SNCA-206ENST00000420646 FGF7P21781 194 aa7.2□□□□□ -1.26
SNCA-206ENST00000420646 CA7P43166 264 aa7.2□□□□□ -1.26
SNCA-206ENST00000420646 ICAM4Q14773 271 aa7.2□□□□□ -1.26
SNCA-206ENST00000420646 MOB3BQ86TA1 216 aa7.2□□□□□ -1.26
SNCA-206ENST00000420646 EGLN1Q9GZT9 426 aa7.2□□□□□ -1.26
SNCA-206ENST00000420646 RPUSD1Q9UJJ7 312 aaKnown RBP7.2□□□□□ -1.26
SNCA-206ENST00000420646 IGHV3-72A0A0B4J1Y9 119 aa7.2□□□□□ -1.26
SNCA-206ENST00000420646 C7orf77A4D0Y5 90 aa7.2□□□□□ -1.26
SNCA-206ENST00000420646 ZNF727A8MUV8 499 aa7.2□□□□□ -1.26
SNCA-206ENST00000420646 FAM90A26D6RGX4 464 aa7.2□□□□□ -1.26
SNCA-206ENST00000420646 CD3EP07766 207 aa7.2□□□□□ -1.26
SNCA-206ENST00000420646 NQO2P16083 231 aa7.2□□□□□ -1.26
SNCA-206ENST00000420646 SOHLH1Q5JUK2 328 aa7.2□□□□□ -1.26
SNCA-206ENST00000420646 CLDND2Q8NHS1 167 aa7.2□□□□□ -1.26
SNCA-206ENST00000420646 CA5BP1Q8WTZ4 195 aa7.2□□□□□ -1.26
SNCA-206ENST00000420646 A0A1W2PPE2 198 aa7.19□□□□□ -1.26
SNCA-206ENST00000420646 hADV38S2A0JD32 116 aa7.19□□□□□ -1.26
SNCA-206ENST00000420646 H7C2Y5 167 aa7.19□□□□□ -1.26
SNCA-206ENST00000420646 ERVK-16P61578 105 aa7.19□□□□□ -1.26
SNCA-206ENST00000420646 S100A12P80511 92 aa7.19□□□□□ -1.26
SNCA-206ENST00000420646 TLE4Q04727 773 aa7.19□□□□□ -1.26
SNCA-206ENST00000420646 MLANAQ16655 118 aa7.19□□□□□ -1.26
SNCA-206ENST00000420646 MUC15Q8N387 334 aa7.19□□□□□ -1.26
SNCA-206ENST00000420646 C2CD4CQ8TF44 421 aa7.19□□□□□ -1.26
SNCA-206ENST00000420646 IGHV1-69-2A0A0G2JMI3 117 aa7.19□□□□□ -1.26
SNCA-206ENST00000420646 PPIHO43447 177 aaKnown RBP7.19□□□□□ -1.26
SNCA-206ENST00000420646 CASP6P55212 293 aa7.19□□□□□ -1.26
SNCA-206ENST00000420646 KLRB1Q12918 225 aa7.19□□□□□ -1.26
SNCA-206ENST00000420646 SP5Q6BEB4 398 aaPredicted RBP7.19□□□□□ -1.26
SNCA-206ENST00000420646 ZNF787Q6DD87 383 aa7.19□□□□□ -1.26
SNCA-206ENST00000420646 RITA1Q96K30 269 aa7.19□□□□□ -1.26
SNCA-206ENST00000420646 PBDC1Q9BVG4 233 aa7.19□□□□□ -1.26
SNCA-206ENST00000420646 MRPL20Q9BYC9 149 aaKnown RBP7.19□□□□□ -1.26
SNCA-206ENST00000420646 USP9YO00507 2555 aaPredicted RBP7.19□□□□□ -1.26
SNCA-206ENST00000420646 TEX15Q9BXT5 2789 aa7.19□□□□□ -1.26
SNCA-206ENST00000420646 NKX6-3A6NJ46 265 aa7.18□□□□□ -1.26
SNCA-206ENST00000420646 E7EUB6 86 aa7.18□□□□□ -1.26
SNCA-206ENST00000420646 SCAF4O95104 1147 aaKnown RBP7.18□□□□□ -1.26
SNCA-206ENST00000420646 IGHV3-48P01763 117 aa7.18□□□□□ -1.26
SNCA-206ENST00000420646 IFNA4P05014 189 aa7.18□□□□□ -1.26
SNCA-206ENST00000420646 APOBEC3AP31941 199 aaPredicted RBP7.18□□□□□ -1.26
SNCA-206ENST00000420646 HOXA1P49639 335 aaPredicted RBP7.18□□□□□ -1.26
SNCA-206ENST00000420646 RAB11AP62491 216 aa7.18□□□□□ -1.26
SNCA-206ENST00000420646 DHRS7BQ6IAN0 325 aaPredicted RBP7.18□□□□□ -1.26
SNCA-206ENST00000420646 SLC25A48Q6ZT89 311 aaKnown RBP7.18□□□□□ -1.26
SNCA-206ENST00000420646 OR10W1Q8NGF6 305 aa7.18□□□□□ -1.26
SNCA-206ENST00000420646 ZNF714Q96N38 554 aa7.18□□□□□ -1.26
SNCA-206ENST00000420646 NPCDR1Q9BY65 106 aa7.18□□□□□ -1.26
SNCA-206ENST00000420646 PATZ1Q9HBE1 687 aaKnown RBP7.18□□□□□ -1.26
SNCA-206ENST00000420646 TCF19Q9Y242 345 aa7.18□□□□□ -1.26
SNCA-206ENST00000420646 KPTNQ9Y664 436 aa7.18□□□□□ -1.26
SNCA-206ENST00000420646 MTORP42345 2549 aa7.18□□□□□ -1.26
SNCA-206ENST00000420646 ZNF729A6NN14 1252 aaPredicted RBP7.18□□□□□ -1.26
SNCA-206ENST00000420646 NDUFB3O43676 98 aa7.18□□□□□ -1.26
SNCA-206ENST00000420646 CRYBA1P05813 215 aa7.18□□□□□ -1.26
SNCA-206ENST00000420646 SRP19P09132 144 aaKnown RBP7.18□□□□□ -1.26
SNCA-206ENST00000420646 APELAP0DMC3 54 aa7.18□□□□□ -1.26
SNCA-206ENST00000420646 LOXP28300 417 aaPredicted RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms