RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 OR52L2PQ8NGH6 319 aa6.7□□□□□ -1.34
HMGXB4-202ENST00000418170 FGFBP3Q8TAT2 258 aa6.7□□□□□ -1.34
HMGXB4-202ENST00000418170 PRDM14Q9GZV8 571 aa6.7□□□□□ -1.34
HMGXB4-202ENST00000418170 C2orf70A6NJV1 201 aa6.69□□□□□ -1.34
HMGXB4-202ENST00000418170 C15orf62A8K5M9 175 aa6.69□□□□□ -1.34
HMGXB4-202ENST00000418170 SYNGR1O43759 233 aa6.69□□□□□ -1.34
HMGXB4-202ENST00000418170 HSBP1O75506 76 aa6.69□□□□□ -1.34
HMGXB4-202ENST00000418170 NUDT3O95989 172 aa6.69□□□□□ -1.34
HMGXB4-202ENST00000418170 APCSP02743 223 aa6.69□□□□□ -1.34
HMGXB4-202ENST00000418170 SLC35B1P78383 322 aa6.69□□□□□ -1.34
HMGXB4-202ENST00000418170 ST20Q9HBF5 79 aa6.69□□□□□ -1.34
HMGXB4-202ENST00000418170 OSTCQ9NRP0 149 aa6.69□□□□□ -1.34
HMGXB4-202ENST00000418170 DLL3Q9NYJ7 618 aa6.69□□□□□ -1.34
HMGXB4-202ENST00000418170 CRIM1Q9NZV1 1036 aa6.69□□□□□ -1.34
HMGXB4-202ENST00000418170 LOC102724200A0A096LPH7 203 aaPredicted RBP6.69□□□□□ -1.34
HMGXB4-202ENST00000418170 GABRG2P18507 467 aa6.69□□□□□ -1.34
HMGXB4-202ENST00000418170 GCHFRP30047 84 aa6.69□□□□□ -1.34
HMGXB4-202ENST00000418170 PSG9Q00887 426 aa6.69□□□□□ -1.34
HMGXB4-202ENST00000418170 ESPL1Q14674 2120 aa6.69□□□□□ -1.34
HMGXB4-202ENST00000418170 TNXAQ16473 311 aa6.69□□□□□ -1.34
HMGXB4-202ENST00000418170 MOB1BQ7L9L4 216 aa6.69□□□□□ -1.34
HMGXB4-202ENST00000418170 SPACA9Q96E40 222 aaPredicted RBP6.69□□□□□ -1.34
HMGXB4-202ENST00000418170 DEPPQ9NTK1 212 aa6.69□□□□□ -1.34
HMGXB4-202ENST00000418170 DMXL1Q9Y485 3027 aa6.69□□□□□ -1.34
HMGXB4-202ENST00000418170 CDIPTO14735 213 aa6.69□□□□□ -1.34
HMGXB4-202ENST00000418170 DKK1O94907 266 aa6.69□□□□□ -1.34
HMGXB4-202ENST00000418170 CCR5P51681 352 aa6.69□□□□□ -1.34
HMGXB4-202ENST00000418170 PCBD1P61457 104 aa6.69□□□□□ -1.34
HMGXB4-202ENST00000418170 C12orf54Q6X4T0 127 aa6.69□□□□□ -1.34
HMGXB4-202ENST00000418170 COLCA1Q6ZS62 124 aa6.69□□□□□ -1.34
HMGXB4-202ENST00000418170 C17orf82Q86X59 251 aaPredicted RBP6.69□□□□□ -1.34
HMGXB4-202ENST00000418170 ZNF430Q9H8G1 570 aaPredicted RBP6.69□□□□□ -1.34
HMGXB4-202ENST00000418170 TP73-AS1Q9UF72 201 aa6.69□□□□□ -1.34
HMGXB4-202ENST00000418170 MUC21A0A0G2JKD1 596 aa6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 MUC21A0A140T8X8 626 aa6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 M0R1X1 148 aa6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 M0R2Z0 102 aa6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 WISP2O76076 250 aa6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 ZFAND5O76080 213 aa6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 CELA3BP08861 270 aa6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 NTF4P34130 210 aa6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 GNG4P50150 75 aa6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 DUSP3P51452 185 aaPredicted RBP6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 CENPWQ5EE01 88 aa6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 MUC21Q5SSG8 566 aa6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 SPATA46Q5T0L3 261 aa6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 C1orf185Q5T7R7 199 aa6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 PRAMEF20Q5VT98 475 aa6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 MRPL54Q6P161 138 aaKnown RBP6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 VWA1Q6PCB0 445 aa6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 RNASE7Q9H1E1 156 aaKnown RBP6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 COL27A1Q8IZC6 1860 aaPredicted RBP6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 SMIM27A0A1W2PRY6 76 aa6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 NDUFS8O00217 210 aa6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 CLDN14O95500 239 aa6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 TCL1AP56279 114 aa6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 RIPPLY3P57055 190 aa6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 ZNF816Q0VGE8 651 aaPredicted RBP6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 SLAQ13239 276 aa6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 ABHD3Q8WU67 409 aa6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 ZNF488Q96MN9 340 aa6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 FOXB1Q99853 325 aa6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 GGTLC1Q9BX51 225 aa6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 ASXL3Q9C0F0 2248 aa6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 IGLV3-12A0A075B6K2 115 aa6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 AREGP15514 252 aa6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 APOBEC3AP31941 199 aaPredicted RBP6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 SSTR5P35346 364 aa6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 PDLIM3Q53GG5 364 aaPredicted RBP6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 SPINK9Q5DT21 86 aa6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 TREML4Q6UXN2 200 aa6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 TCF24Q7RTU0 167 aa6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 SPATA12Q7Z6I5 190 aa6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 DOLPP1Q86YN1 238 aa6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 ST6GALNAC6Q969X2 333 aa6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 MGST2Q99735 147 aa6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 SF3B5Q9BWJ5 86 aaKnown RBP6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 CHCHD2Q9Y6H1 151 aaPredicted RBP6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 TMEM238LA0A1B0GVL6 79 aa6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 ISLRO14498 428 aa6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 RAB29O14966 203 aa6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 CD5LO43866 347 aa6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 SAP30O75446 220 aa6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 NPY1RP25929 384 aa6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 CA7P43166 264 aa6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 FXYD3Q14802 87 aa6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 SMIM21Q3B7S5 101 aa6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 ZNF645Q8N7E2 425 aa6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 NINJ1Q92982 152 aa6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 TECRQ9NZ01 308 aaKnown RBP6.68□□□□□ -1.34
HMGXB4-202ENST00000418170 MYO9BQ13459 2157 aa6.67□□□□□ -1.34
HMGXB4-202ENST00000418170 MT-CO2P00403 227 aa6.67□□□□□ -1.34
HMGXB4-202ENST00000418170 IGLC1P0CG04 106 aa6.67□□□□□ -1.34
HMGXB4-202ENST00000418170 OTX2P32243 289 aa6.67□□□□□ -1.34
HMGXB4-202ENST00000418170 ARR3P36575 388 aa6.67□□□□□ -1.34
HMGXB4-202ENST00000418170 RPL30P62888 115 aaKnown RBP6.67□□□□□ -1.34
HMGXB4-202ENST00000418170 MIC13Q5XKP0 118 aa6.67□□□□□ -1.34
HMGXB4-202ENST00000418170 SPACA3Q8IXA5 215 aa6.67□□□□□ -1.34
HMGXB4-202ENST00000418170 ZBTB34Q8NCN2 500 aa6.67□□□□□ -1.34
HMGXB4-202ENST00000418170 UBALD1Q8TB05 177 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 160.8 ms