RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 ZNF891A8MT65 544 aaPredicted RBP12.32□□□□□ -0.44
NCKIPSD-204ENST00000416649 CER1O95813 267 aa12.32□□□□□ -0.44
NCKIPSD-204ENST00000416649 IGLV2-14P01704 120 aa12.32□□□□□ -0.44
NCKIPSD-204ENST00000416649 MORN2Q502X0 79 aa12.32□□□□□ -0.44
NCKIPSD-204ENST00000416649 ZIC4Q8N9L1 334 aa12.32□□□□□ -0.44
NCKIPSD-204ENST00000416649 SERTAD4Q9NUC0 356 aa12.32□□□□□ -0.44
NCKIPSD-204ENST00000416649 OTOGLQ3ZCN5 2332 aa12.32□□□□□ -0.44
NCKIPSD-204ENST00000416649 IGLC7A0M8Q6 106 aa12.32□□□□□ -0.44
NCKIPSD-204ENST00000416649 IGLL1P15814 213 aa12.32□□□□□ -0.44
NCKIPSD-204ENST00000416649 AMMECR1LQ6DCA0 310 aa12.32□□□□□ -0.44
NCKIPSD-204ENST00000416649 DOLPP1Q86YN1 238 aa12.32□□□□□ -0.44
NCKIPSD-204ENST00000416649 KCNE4Q8WWG9 221 aa12.32□□□□□ -0.44
NCKIPSD-204ENST00000416649 PRR31Q5SQ13 230 aa12.31□□□□□ -0.44
NCKIPSD-204ENST00000416649 DRAM1Q8N682 238 aa12.31□□□□□ -0.44
NCKIPSD-204ENST00000416649 TSKUQ8WUA8 353 aa12.31□□□□□ -0.44
NCKIPSD-204ENST00000416649 DEFB126Q9BYW3 111 aa12.31□□□□□ -0.44
NCKIPSD-204ENST00000416649 STRADBQ9C0K7 418 aa12.31□□□□□ -0.44
NCKIPSD-204ENST00000416649 RNASE7Q9H1E1 156 aaKnown RBP12.31□□□□□ -0.44
NCKIPSD-204ENST00000416649 TRAPPC2LQ9UL33 140 aa12.31□□□□□ -0.44
NCKIPSD-204ENST00000416649 SLC23A3Q6PIS1 610 aa12.31□□□□□ -0.44
NCKIPSD-204ENST00000416649 YTHDF2Q9Y5A9 579 aaKnown RBP12.31□□□□□ -0.44
NCKIPSD-204ENST00000416649 ROS1P08922 2347 aa12.31□□□□□ -0.44
NCKIPSD-204ENST00000416649 RRHO14718 337 aa12.31□□□□□ -0.44
NCKIPSD-204ENST00000416649 HSBP1O75506 76 aa12.31□□□□□ -0.44
NCKIPSD-204ENST00000416649 CEACAM16Q2WEN9 425 aa12.31□□□□□ -0.44
NCKIPSD-204ENST00000416649 PDLIM3Q53GG5 364 aaPredicted RBP12.31□□□□□ -0.44
NCKIPSD-204ENST00000416649 ASPHD1Q5U4P2 390 aa12.31□□□□□ -0.44
NCKIPSD-204ENST00000416649 FGF23Q9GZV9 251 aaPredicted RBP12.31□□□□□ -0.44
NCKIPSD-204ENST00000416649 OR5B21A6NL26 309 aa12.3□□□□□ -0.44
NCKIPSD-204ENST00000416649 NUDT3O95989 172 aa12.3□□□□□ -0.44
NCKIPSD-204ENST00000416649 CA6P23280 308 aa12.3□□□□□ -0.44
NCKIPSD-204ENST00000416649 NFAM1Q8NET5 270 aaPredicted RBP12.3□□□□□ -0.44
NCKIPSD-204ENST00000416649 OR2M7Q8NG81 312 aa12.3□□□□□ -0.44
NCKIPSD-204ENST00000416649 SFXN3Q9BWM7 321 aa12.3□□□□□ -0.44
NCKIPSD-204ENST00000416649 GNB1LQ9BYB4 327 aa12.3□□□□□ -0.44
NCKIPSD-204ENST00000416649 OR2H1Q9GZK4 316 aa12.3□□□□□ -0.44
NCKIPSD-204ENST00000416649 OR2D2Q9H210 308 aa12.3□□□□□ -0.44
NCKIPSD-204ENST00000416649 TMEM38BQ9NVV0 291 aa12.3□□□□□ -0.44
NCKIPSD-204ENST00000416649 MMP23AO75900 390 aa12.3□□□□□ -0.44
NCKIPSD-204ENST00000416649 NTF4P34130 210 aa12.3□□□□□ -0.44
NCKIPSD-204ENST00000416649 MIC13Q5XKP0 118 aa12.3□□□□□ -0.44
NCKIPSD-204ENST00000416649 SSMEM1Q8WWF3 244 aa12.3□□□□□ -0.44
NCKIPSD-204ENST00000416649 ADAMTS20P59510 1910 aa12.3□□□□□ -0.44
NCKIPSD-204ENST00000416649 LRRC30A6NM36 301 aa12.29□□□□□ -0.44
NCKIPSD-204ENST00000416649 FAM53AQ6NSI3 398 aaPredicted RBP12.29□□□□□ -0.44
NCKIPSD-204ENST00000416649 MEGF9Q9H1U4 602 aa12.29□□□□□ -0.44
NCKIPSD-204ENST00000416649 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.29□□□□□ -0.44
NCKIPSD-204ENST00000416649 CLCF1Q9UBD9 225 aa12.29□□□□□ -0.44
NCKIPSD-204ENST00000416649 TRAV9-2A0A087WT02 112 aa12.29□□□□□ -0.44
NCKIPSD-204ENST00000416649 TRAV24A0A0B4J272 114 aa12.29□□□□□ -0.44
NCKIPSD-204ENST00000416649 FAM90A10PA6NDY2 464 aa12.29□□□□□ -0.44
NCKIPSD-204ENST00000416649 FAM90A18PA6NE21 464 aa12.29□□□□□ -0.44
NCKIPSD-204ENST00000416649 FAM90A16PA6NEW6 464 aa12.29□□□□□ -0.44
NCKIPSD-204ENST00000416649 FAM90A20PA6NIJ5 464 aa12.29□□□□□ -0.44
NCKIPSD-204ENST00000416649 FAM90A8PA6NJQ4 464 aa12.29□□□□□ -0.44
NCKIPSD-204ENST00000416649 FAM90A7PA6NKC0 464 aa12.29□□□□□ -0.44
NCKIPSD-204ENST00000416649 PMS2P5A8MQ11 134 aa12.29□□□□□ -0.44
NCKIPSD-204ENST00000416649 FAM90A22PA8MWA6 464 aa12.29□□□□□ -0.44
NCKIPSD-204ENST00000416649 FAM90A12PA8MX19 464 aa12.29□□□□□ -0.44
NCKIPSD-204ENST00000416649 FAM90A5PA8MXJ8 464 aa12.29□□□□□ -0.44
NCKIPSD-204ENST00000416649 FAM90A23PA8MXZ1 464 aa12.29□□□□□ -0.44
NCKIPSD-204ENST00000416649 BMPR1BO00238 502 aa12.29□□□□□ -0.44
NCKIPSD-204ENST00000416649 ZFAND5O76080 213 aa12.29□□□□□ -0.44
NCKIPSD-204ENST00000416649 FAM90A15PP0C7V4 464 aa12.29□□□□□ -0.44
NCKIPSD-204ENST00000416649 FAM90A13PP0C7W8 464 aa12.29□□□□□ -0.44
NCKIPSD-204ENST00000416649 FAM90A14PP0C7W9 464 aa12.29□□□□□ -0.44
NCKIPSD-204ENST00000416649 FAM90A24PP0C7X0 464 aa12.29□□□□□ -0.44
NCKIPSD-204ENST00000416649 SP9P0CG40 484 aa12.29□□□□□ -0.44
NCKIPSD-204ENST00000416649 CD1BP29016 333 aa12.29□□□□□ -0.44
NCKIPSD-204ENST00000416649 ZNF439Q8NDP4 499 aa12.29□□□□□ -0.44
NCKIPSD-204ENST00000416649 Q8NFD4 153 aa12.29□□□□□ -0.44
NCKIPSD-204ENST00000416649 OR4F17Q8NGA8 305 aa12.29□□□□□ -0.44
NCKIPSD-204ENST00000416649 FOXB1Q99853 325 aa12.29□□□□□ -0.44
NCKIPSD-204ENST00000416649 CDC42EP3Q9UKI2 254 aa12.29□□□□□ -0.44
NCKIPSD-204ENST00000416649 MED13Q9UHV7 2174 aa12.29□□□□□ -0.44
NCKIPSD-204ENST00000416649 DMXL2Q8TDJ6 3036 aa12.28□□□□□ -0.44
NCKIPSD-204ENST00000416649 FAM90A26D6RGX4 464 aa12.28□□□□□ -0.44
NCKIPSD-204ENST00000416649 M0R2Z0 102 aa12.28□□□□□ -0.44
NCKIPSD-204ENST00000416649 LINC00205P59089 165 aa12.28□□□□□ -0.44
NCKIPSD-204ENST00000416649 PMCHL1Q16048 86 aa12.28□□□□□ -0.44
NCKIPSD-204ENST00000416649 OR10J3Q5JRS4 329 aa12.28□□□□□ -0.44
NCKIPSD-204ENST00000416649 MRPL21Q7Z2W9 205 aaKnown RBP12.28□□□□□ -0.44
NCKIPSD-204ENST00000416649 WFDC8Q8IUA0 241 aa12.28□□□□□ -0.44
NCKIPSD-204ENST00000416649 EAF1Q96JC9 268 aaPredicted RBP12.28□□□□□ -0.44
NCKIPSD-204ENST00000416649 ARL2-SNX15V9GYD0 113 aa12.28□□□□□ -0.44
NCKIPSD-204ENST00000416649 EXPH5Q8NEV8 1989 aa12.28□□□□□ -0.44
NCKIPSD-204ENST00000416649 A0A0J9YW62 118 aa12.28□□□□□ -0.44
NCKIPSD-204ENST00000416649 LRP5LA4QPB2 252 aa12.28□□□□□ -0.44
NCKIPSD-204ENST00000416649 K7ERU9 68 aa12.28□□□□□ -0.44
NCKIPSD-204ENST00000416649 VAMP5O95183 116 aa12.28□□□□□ -0.44
NCKIPSD-204ENST00000416649 MGST1P10620 155 aaKnown RBP12.28□□□□□ -0.44
NCKIPSD-204ENST00000416649 SRSF7Q16629 238 aaKnown RBP eCLIP12.28□□□□□ -0.44
NCKIPSD-204ENST00000416649 RNASEKQ6P5S7 137 aaKnown RBP12.28□□□□□ -0.44
NCKIPSD-204ENST00000416649 TMEM136Q6ZRR5 245 aa12.28□□□□□ -0.44
NCKIPSD-204ENST00000416649 C19orf35Q6ZS72 473 aa12.28□□□□□ -0.44
NCKIPSD-204ENST00000416649 OR5B3Q8NH48 314 aa12.28□□□□□ -0.44
NCKIPSD-204ENST00000416649 SPACA9Q96E40 222 aaPredicted RBP12.28□□□□□ -0.44
NCKIPSD-204ENST00000416649 SRXN1Q9BYN0 137 aa12.28□□□□□ -0.44
NCKIPSD-204ENST00000416649 DLL3Q9NYJ7 618 aa12.28□□□□□ -0.44
NCKIPSD-204ENST00000416649 V9GYV3 84 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms