RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 ARPC4P59998 168 aa11.48□□□□□ -0.57
UBXN4-203ENST00000416538 SSX9Q7RTT3 188 aa11.48□□□□□ -0.57
UBXN4-203ENST00000416538 TTC9CQ8N5M4 171 aa11.48□□□□□ -0.57
UBXN4-203ENST00000416538 USMG5Q96IX5 58 aa11.48□□□□□ -0.57
UBXN4-203ENST00000416538 ELOVL1Q9BW60 279 aa11.48□□□□□ -0.57
UBXN4-203ENST00000416538 DYNC2H1Q8NCM8 4307 aaKnown RBP11.48□□□□□ -0.57
UBXN4-203ENST00000416538 A0A0A6YYH2 397 aa11.47□□□□□ -0.57
UBXN4-203ENST00000416538 A6NJ64 397 aa11.47□□□□□ -0.57
UBXN4-203ENST00000416538 FAM223BA6NKX1 122 aa11.47□□□□□ -0.57
UBXN4-203ENST00000416538 OR2J3O76001 311 aa11.47□□□□□ -0.57
UBXN4-203ENST00000416538 SLC22A5O76082 557 aa11.47□□□□□ -0.57
UBXN4-203ENST00000416538 OR2A4O95047 310 aa11.47□□□□□ -0.57
UBXN4-203ENST00000416538 IGHV4-30-4P0DP06 118 aa11.47□□□□□ -0.57
UBXN4-203ENST00000416538 RPEL1Q2QD12 228 aa11.47□□□□□ -0.57
UBXN4-203ENST00000416538 TIMM50Q3ZCQ8 353 aa11.47□□□□□ -0.57
UBXN4-203ENST00000416538 ZNF66Q6ZN08 573 aa11.47□□□□□ -0.57
UBXN4-203ENST00000416538 ANKRD13BQ86YJ7 626 aa11.47□□□□□ -0.57
UBXN4-203ENST00000416538 FAM223AQ8IWN6 122 aa11.47□□□□□ -0.57
UBXN4-203ENST00000416538 FANCD2OSQ96PS1 177 aa11.47□□□□□ -0.57
UBXN4-203ENST00000416538 OR2A7Q96R45 310 aa11.47□□□□□ -0.57
UBXN4-203ENST00000416538 SPIN2AQ99865 258 aa11.47□□□□□ -0.57
UBXN4-203ENST00000416538 SPIN2BQ9BPZ2 258 aa11.47□□□□□ -0.57
UBXN4-203ENST00000416538 C19orf73Q9NVV2 129 aa11.47□□□□□ -0.57
UBXN4-203ENST00000416538 ANAPC10Q9UM13 185 aa11.47□□□□□ -0.57
UBXN4-203ENST00000416538 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.46□□□□□ -0.57
UBXN4-203ENST00000416538 TRAV3A0A0B4J244 114 aa11.46□□□□□ -0.57
UBXN4-203ENST00000416538 PPP5D1E7EU14 171 aa11.46□□□□□ -0.57
UBXN4-203ENST00000416538 CREBL2O60519 120 aaPredicted RBP11.46□□□□□ -0.57
UBXN4-203ENST00000416538 ZNF735P0CB33 412 aa11.46□□□□□ -0.57
UBXN4-203ENST00000416538 RPS19P39019 145 aaKnown RBP11.46□□□□□ -0.57
UBXN4-203ENST00000416538 RPL27AP46776 148 aaKnown RBP11.46□□□□□ -0.57
UBXN4-203ENST00000416538 FXYD4P59646 89 aa11.46□□□□□ -0.57
UBXN4-203ENST00000416538 LSM3P62310 102 aaKnown RBP11.46□□□□□ -0.57
UBXN4-203ENST00000416538 C15orf32Q32M92 178 aa11.46□□□□□ -0.57
UBXN4-203ENST00000416538 ZNF818PQ6ZRF7 136 aa11.46□□□□□ -0.57
UBXN4-203ENST00000416538 CCDC140Q96MF4 163 aa11.46□□□□□ -0.57
UBXN4-203ENST00000416538 SLC5A7Q9GZV3 580 aa11.46□□□□□ -0.57
UBXN4-203ENST00000416538 S4R3C0 116 aa11.46□□□□□ -0.57
UBXN4-203ENST00000416538 NPIPB5A8MRT5 1133 aa11.45□□□□□ -0.58
UBXN4-203ENST00000416538 SULT1C2O00338 296 aa11.45□□□□□ -0.58
UBXN4-203ENST00000416538 ACTL6BO94805 426 aa11.45□□□□□ -0.58
UBXN4-203ENST00000416538 HLA-AP01891 365 aaKnown RBP11.45□□□□□ -0.58
UBXN4-203ENST00000416538 MECP2P51608 486 aaKnown RBP11.45□□□□□ -0.58
UBXN4-203ENST00000416538 MSMO1Q15800 293 aa11.45□□□□□ -0.58
UBXN4-203ENST00000416538 OR4A47Q6IF82 309 aa11.45□□□□□ -0.58
UBXN4-203ENST00000416538 TMEM17Q86X19 198 aa11.45□□□□□ -0.58
UBXN4-203ENST00000416538 SPAG16Q8N0X2 631 aa11.45□□□□□ -0.58
UBXN4-203ENST00000416538 NECAP1Q8NC96 275 aa11.45□□□□□ -0.58
UBXN4-203ENST00000416538 FYTTD1Q96QD9 318 aaKnown RBP11.45□□□□□ -0.58
UBXN4-203ENST00000416538 TM2D3Q9BRN9 247 aa11.45□□□□□ -0.58
UBXN4-203ENST00000416538 ZNF257Q9Y2Q1 563 aa11.45□□□□□ -0.58
UBXN4-203ENST00000416538 XRCC3O43542 346 aa11.44□□□□□ -0.58
UBXN4-203ENST00000416538 AIREO43918 545 aa11.44□□□□□ -0.58
UBXN4-203ENST00000416538 NDUFB8O95169 186 aa11.44□□□□□ -0.58
UBXN4-203ENST00000416538 IGHV3-23P01764 117 aa11.44□□□□□ -0.58
UBXN4-203ENST00000416538 REG1AP05451 166 aa11.44□□□□□ -0.58
UBXN4-203ENST00000416538 TAS2R20P59543 309 aa11.44□□□□□ -0.58
UBXN4-203ENST00000416538 ATP5G2Q06055 141 aa11.44□□□□□ -0.58
UBXN4-203ENST00000416538 UBE2NLQ5JXB2 153 aa11.44□□□□□ -0.58
UBXN4-203ENST00000416538 OR5AP2Q8NGF4 316 aa11.44□□□□□ -0.58
UBXN4-203ENST00000416538 FXYD6Q9H0Q3 95 aa11.44□□□□□ -0.58
UBXN4-203ENST00000416538 DIABLOQ9NR28 239 aa11.44□□□□□ -0.58
UBXN4-203ENST00000416538 SLC2A9Q9NRM0 540 aa11.44□□□□□ -0.58
UBXN4-203ENST00000416538 SIGLEC8Q9NYZ4 499 aa11.44□□□□□ -0.58
UBXN4-203ENST00000416538 IGLC7A0M8Q6 106 aa11.43□□□□□ -0.58
UBXN4-203ENST00000416538 A8MZ25 164 aa11.43□□□□□ -0.58
UBXN4-203ENST00000416538 RBFOX2O43251 390 aaKnown RBP eCLIP11.43□□□□□ -0.58
UBXN4-203ENST00000416538 S1PR2O95136 353 aa11.43□□□□□ -0.58
UBXN4-203ENST00000416538 EIF4EP06730 217 aaKnown RBP11.43□□□□□ -0.58
UBXN4-203ENST00000416538 CRYGCP07315 174 aa11.43□□□□□ -0.58
UBXN4-203ENST00000416538 CTRB1P17538 263 aa11.43□□□□□ -0.58
UBXN4-203ENST00000416538 HLA-GP17693 338 aa11.43□□□□□ -0.58
UBXN4-203ENST00000416538 KIR2DS2P43631 304 aa11.43□□□□□ -0.58
UBXN4-203ENST00000416538 NCS1P62166 190 aa11.43□□□□□ -0.58
UBXN4-203ENST00000416538 RPL8P62917 257 aaKnown RBP11.43□□□□□ -0.58
UBXN4-203ENST00000416538 POU2AF1Q16633 256 aa11.43□□□□□ -0.58
UBXN4-203ENST00000416538 KLK9Q2XQG4 91 aa11.43□□□□□ -0.58
UBXN4-203ENST00000416538 CTRB2Q6GPI1 263 aa11.43□□□□□ -0.58
UBXN4-203ENST00000416538 SAMD12Q8N8I0 201 aa11.43□□□□□ -0.58
UBXN4-203ENST00000416538 OR51H1Q8NH63 302 aa11.43□□□□□ -0.58
UBXN4-203ENST00000416538 VSTM2AQ8TAG5 236 aa11.43□□□□□ -0.58
UBXN4-203ENST00000416538 BET1LQ9NYM9 111 aa11.43□□□□□ -0.58
UBXN4-203ENST00000416538 EHFQ9NZC4 300 aa11.43□□□□□ -0.58
UBXN4-203ENST00000416538 FBXL7Q9UJT9 491 aa11.43□□□□□ -0.58
UBXN4-203ENST00000416538 KLK9Q9UKQ9 250 aa11.43□□□□□ -0.58
UBXN4-203ENST00000416538 SELENOKQ9Y6D0 94 aa11.43□□□□□ -0.58
UBXN4-203ENST00000416538 CSMD3Q7Z407 3707 aa11.43□□□□□ -0.58
UBXN4-203ENST00000416538 STARD9Q9P2P6 4700 aa11.42□□□□□ -0.58
UBXN4-203ENST00000416538 MFSD2BA6NFX1 497 aa11.42□□□□□ -0.58
UBXN4-203ENST00000416538 RPA2P15927 270 aa11.42□□□□□ -0.58
UBXN4-203ENST00000416538 PSMB6P28072 239 aa11.42□□□□□ -0.58
UBXN4-203ENST00000416538 GNRHRP30968 328 aa11.42□□□□□ -0.58
UBXN4-203ENST00000416538 MAS1LP35410 378 aa11.42□□□□□ -0.58
UBXN4-203ENST00000416538 OR2B8PP59922 312 aa11.42□□□□□ -0.58
UBXN4-203ENST00000416538 TSPAN14Q8NG11 270 aa11.42□□□□□ -0.58
UBXN4-203ENST00000416538 GIMAP1Q8WWP7 306 aa11.42□□□□□ -0.58
UBXN4-203ENST00000416538 CACNG8Q8WXS5 425 aa11.42□□□□□ -0.58
UBXN4-203ENST00000416538 WFDC10AQ9H1F0 79 aa11.42□□□□□ -0.58
UBXN4-203ENST00000416538 TENM2Q9NT68 2774 aa11.41□□□□□ -0.58
UBXN4-203ENST00000416538 IGLV11-55A0A075B6I3 123 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms