RNA–Protein interactions for RNA: ENST00000415670.1

CDC42EP1-202, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-202ENST00000415670 TMEM177Q53S58 311 aa13.15□□□□□ -0.3
CDC42EP1-202ENST00000415670 OR52B4Q8NGK2 314 aa13.15□□□□□ -0.3
CDC42EP1-202ENST00000415670 OR2T10Q8NGZ9 312 aa13.15□□□□□ -0.3
CDC42EP1-202ENST00000415670 FLYWCH2Q96CP2 140 aaKnown RBP13.15□□□□□ -0.3
CDC42EP1-202ENST00000415670 WWC2-AS2Q96NR7 200 aa13.15□□□□□ -0.3
CDC42EP1-202ENST00000415670 SEC22CQ9BRL7 303 aa13.15□□□□□ -0.3
CDC42EP1-202ENST00000415670 PLEKHA2Q9HB19 425 aa13.15□□□□□ -0.3
CDC42EP1-202ENST00000415670 GPN1Q9HCN4 374 aaPredicted RBP13.15□□□□□ -0.3
CDC42EP1-202ENST00000415670 A0A0B4J293 547 aa13.14□□□□□ -0.31
CDC42EP1-202ENST00000415670 DUS4LO95620 317 aaKnown RBP13.14□□□□□ -0.31
CDC42EP1-202ENST00000415670 CDS2O95674 445 aa13.14□□□□□ -0.31
CDC42EP1-202ENST00000415670 HPRT1P00492 218 aa13.14□□□□□ -0.31
CDC42EP1-202ENST00000415670 MOSP00540 346 aa13.14□□□□□ -0.31
CDC42EP1-202ENST00000415670 RPA2P15927 270 aa13.14□□□□□ -0.31
CDC42EP1-202ENST00000415670 CD24P25063 80 aa13.14□□□□□ -0.31
CDC42EP1-202ENST00000415670 HOXD3P31249 432 aaPredicted RBP13.14□□□□□ -0.31
CDC42EP1-202ENST00000415670 LPAR6P43657 344 aa13.14□□□□□ -0.31
CDC42EP1-202ENST00000415670 TATDN3Q17R31 274 aa13.14□□□□□ -0.31
CDC42EP1-202ENST00000415670 LIAT1Q6ZQX7 453 aa13.14□□□□□ -0.31
CDC42EP1-202ENST00000415670 OSR1Q8TAX0 266 aaPredicted RBP13.14□□□□□ -0.31
CDC42EP1-202ENST00000415670 ZNF431Q8TF32 576 aaPredicted RBP13.14□□□□□ -0.31
CDC42EP1-202ENST00000415670 CASTOR1Q8WTX7 329 aa13.14□□□□□ -0.31
CDC42EP1-202ENST00000415670 RBMXL1Q96E39 390 aaKnown RBP13.14□□□□□ -0.31
CDC42EP1-202ENST00000415670 EAF1Q96JC9 268 aaPredicted RBP13.14□□□□□ -0.31
CDC42EP1-202ENST00000415670 RNF5Q99942 180 aa13.14□□□□□ -0.31
CDC42EP1-202ENST00000415670 COMMD9Q9P000 198 aa13.14□□□□□ -0.31
CDC42EP1-202ENST00000415670 RYR2Q92736 4967 aa13.13□□□□□ -0.31
CDC42EP1-202ENST00000415670 C7orf66A4D0T2 115 aa13.13□□□□□ -0.31
CDC42EP1-202ENST00000415670 SNRPGP15A8MWD9 76 aa13.13□□□□□ -0.31
CDC42EP1-202ENST00000415670 S1PR2O95136 353 aa13.13□□□□□ -0.31
CDC42EP1-202ENST00000415670 IGKV1-39P01597 117 aa13.13□□□□□ -0.31
CDC42EP1-202ENST00000415670 IGKV1D-39P04432 117 aa13.13□□□□□ -0.31
CDC42EP1-202ENST00000415670 CD33P20138 364 aa13.13□□□□□ -0.31
CDC42EP1-202ENST00000415670 SRPXP78539 464 aa13.13□□□□□ -0.31
CDC42EP1-202ENST00000415670 HES1Q14469 280 aa13.13□□□□□ -0.31
CDC42EP1-202ENST00000415670 ANKRD55Q3KP44 614 aa13.13□□□□□ -0.31
CDC42EP1-202ENST00000415670 TMEM219Q86XT9 240 aa13.13□□□□□ -0.31
CDC42EP1-202ENST00000415670 NDUFA11Q86Y39 141 aa13.13□□□□□ -0.31
CDC42EP1-202ENST00000415670 LGI3Q8N145 548 aa13.13□□□□□ -0.31
CDC42EP1-202ENST00000415670 Q8N6K4 173 aa13.13□□□□□ -0.31
CDC42EP1-202ENST00000415670 LRTM2Q8N967 370 aa13.13□□□□□ -0.31
CDC42EP1-202ENST00000415670 WFDC9Q8NEX5 89 aa13.13□□□□□ -0.31
CDC42EP1-202ENST00000415670 LHFPL5Q8TAF8 219 aa13.13□□□□□ -0.31
CDC42EP1-202ENST00000415670 MITD1Q8WV92 249 aa13.13□□□□□ -0.31
CDC42EP1-202ENST00000415670 IL22RA2Q969J5 263 aa13.13□□□□□ -0.31
CDC42EP1-202ENST00000415670 TMEM56Q96MV1 263 aa13.13□□□□□ -0.31
CDC42EP1-202ENST00000415670 PRR13Q9NZ81 148 aa13.13□□□□□ -0.31
CDC42EP1-202ENST00000415670 TMEM56-RWDD3S4R434 201 aa13.13□□□□□ -0.31
CDC42EP1-202ENST00000415670 DYNC2H1Q8NCM8 4307 aaKnown RBP13.13□□□□□ -0.31
CDC42EP1-202ENST00000415670 A0A0B4J2A0 478 aa13.12□□□□□ -0.31
CDC42EP1-202ENST00000415670 SHOXO15266 292 aa13.12□□□□□ -0.31
CDC42EP1-202ENST00000415670 HRASP01112 189 aa13.12□□□□□ -0.31
CDC42EP1-202ENST00000415670 TMEM11P17152 192 aa13.12□□□□□ -0.31
CDC42EP1-202ENST00000415670 LGALS7P47929 136 aa13.12□□□□□ -0.31
CDC42EP1-202ENST00000415670 RPS16P62249 146 aaKnown RBP13.12□□□□□ -0.31
CDC42EP1-202ENST00000415670 ZNF695Q8IW36 515 aa13.12□□□□□ -0.31
CDC42EP1-202ENST00000415670 SELENOHQ8IZQ5 122 aaKnown RBP13.12□□□□□ -0.31
CDC42EP1-202ENST00000415670 COQ8AQ8NI60 647 aa13.12□□□□□ -0.31
CDC42EP1-202ENST00000415670 RBPMSQ93062 196 aaKnown RBP13.12□□□□□ -0.31
CDC42EP1-202ENST00000415670 HARBI1Q96MB7 349 aa13.12□□□□□ -0.31
CDC42EP1-202ENST00000415670 SHPKQ9UHJ6 478 aa13.12□□□□□ -0.31
CDC42EP1-202ENST00000415670 TCF19Q9Y242 345 aa13.12□□□□□ -0.31
CDC42EP1-202ENST00000415670 ALG5Q9Y673 324 aa13.12□□□□□ -0.31
CDC42EP1-202ENST00000415670 PIGBOS1A0A0B4J2F0 54 aa13.11□□□□□ -0.31
CDC42EP1-202ENST00000415670 A6NDX4 124 aa13.11□□□□□ -0.31
CDC42EP1-202ENST00000415670 CREBL2O60519 120 aaPredicted RBP13.11□□□□□ -0.31
CDC42EP1-202ENST00000415670 NQO2P16083 231 aa13.11□□□□□ -0.31
CDC42EP1-202ENST00000415670 HNF4GQ14541 408 aa13.11□□□□□ -0.31
CDC42EP1-202ENST00000415670 POU2AF1Q16633 256 aa13.11□□□□□ -0.31
CDC42EP1-202ENST00000415670 TMEM268Q5VZI3 342 aa13.11□□□□□ -0.31
CDC42EP1-202ENST00000415670 Q6ZNX1 250 aa13.11□□□□□ -0.31
CDC42EP1-202ENST00000415670 OR4F17Q8NGA8 305 aa13.11□□□□□ -0.31
CDC42EP1-202ENST00000415670 RITA1Q96K30 269 aa13.11□□□□□ -0.31
CDC42EP1-202ENST00000415670 OR4F4Q96R69 305 aa13.11□□□□□ -0.31
CDC42EP1-202ENST00000415670 TSNAXQ99598 290 aaKnown RBP13.11□□□□□ -0.31
CDC42EP1-202ENST00000415670 PHB2Q99623 299 aa13.11□□□□□ -0.31
CDC42EP1-202ENST00000415670 AIFM2Q9BRQ8 373 aa13.11□□□□□ -0.31
CDC42EP1-202ENST00000415670 DUXBA0A1W2PPF3 345 aa13.1□□□□□ -0.31
CDC42EP1-202ENST00000415670 SRRM4A7MD48 611 aaKnown RBP13.1□□□□□ -0.31
CDC42EP1-202ENST00000415670 ATG12O94817 140 aa13.1□□□□□ -0.31
CDC42EP1-202ENST00000415670 SPDEFO95238 335 aa13.1□□□□□ -0.31
CDC42EP1-202ENST00000415670 IGLV2-23P01705 113 aa13.1□□□□□ -0.31
CDC42EP1-202ENST00000415670 ERVK-16P61578 105 aa13.1□□□□□ -0.31
CDC42EP1-202ENST00000415670 BLCAPP62952 87 aa13.1□□□□□ -0.31
CDC42EP1-202ENST00000415670 CD69Q07108 199 aa13.1□□□□□ -0.31
CDC42EP1-202ENST00000415670 TCTEX1D4Q5JR98 221 aa13.1□□□□□ -0.31
CDC42EP1-202ENST00000415670 LIN54Q6MZP7 749 aa13.1□□□□□ -0.31
CDC42EP1-202ENST00000415670 C12orf45Q8N5I9 185 aaPredicted RBP13.1□□□□□ -0.31
CDC42EP1-202ENST00000415670 OR8H1Q8NGG4 311 aa13.1□□□□□ -0.31
CDC42EP1-202ENST00000415670 SEC22AQ96IW7 307 aa13.1□□□□□ -0.31
CDC42EP1-202ENST00000415670 RHOVQ96L33 236 aa13.1□□□□□ -0.31
CDC42EP1-202ENST00000415670 WNT10AQ9GZT5 417 aa13.1□□□□□ -0.31
CDC42EP1-202ENST00000415670 OR51J1Q9H342 316 aa13.1□□□□□ -0.31
CDC42EP1-202ENST00000415670 RANBP3Q9H6Z4 567 aaPredicted RBP13.1□□□□□ -0.31
CDC42EP1-202ENST00000415670 PITPNC1Q9UKF7 332 aa13.1□□□□□ -0.31
CDC42EP1-202ENST00000415670 NDUFA3O95167 84 aa13.09□□□□□ -0.31
CDC42EP1-202ENST00000415670 KRASP01116 189 aa13.09□□□□□ -0.31
CDC42EP1-202ENST00000415670 IGKV1-5P01602 117 aa13.09□□□□□ -0.31
CDC42EP1-202ENST00000415670 CNTFRP26992 372 aa13.09□□□□□ -0.31
CDC42EP1-202ENST00000415670 G6PCP35575 357 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms