RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 MSGN1A6NI15 193 aa7.4□□□□□ -1.22
LINC01090-201ENST00000415357 LINC01619G3V211 115 aa7.4□□□□□ -1.22
LINC01090-201ENST00000415357 SULT1C2O00338 296 aa7.4□□□□□ -1.22
LINC01090-201ENST00000415357 RAMP3O60896 148 aa7.4□□□□□ -1.22
LINC01090-201ENST00000415357 RBMXL2O75526 392 aaKnown RBP7.4□□□□□ -1.22
LINC01090-201ENST00000415357 APOA1P02647 267 aa7.4□□□□□ -1.22
LINC01090-201ENST00000415357 PRSS3P35030 304 aa7.4□□□□□ -1.22
LINC01090-201ENST00000415357 ALDH3B2P48448 385 aa7.4□□□□□ -1.22
LINC01090-201ENST00000415357 HERV-K104P61576 105 aa7.4□□□□□ -1.22
LINC01090-201ENST00000415357 RNASE12Q5GAN4 147 aaKnown RBP7.4□□□□□ -1.22
LINC01090-201ENST00000415357 C9orf66Q5T8R8 295 aa7.4□□□□□ -1.22
LINC01090-201ENST00000415357 ZNF66Q6ZN08 573 aa7.4□□□□□ -1.22
LINC01090-201ENST00000415357 ZNF818PQ6ZRF7 136 aa7.4□□□□□ -1.22
LINC01090-201ENST00000415357 C19orf35Q6ZS72 473 aa7.4□□□□□ -1.22
LINC01090-201ENST00000415357 SSX9Q7RTT3 188 aa7.4□□□□□ -1.22
LINC01090-201ENST00000415357 DLX4Q92988 240 aaPredicted RBP7.4□□□□□ -1.22
LINC01090-201ENST00000415357 PRR25Q96S07 402 aa7.4□□□□□ -1.22
LINC01090-201ENST00000415357 MRPS26Q9BYN8 205 aaKnown RBP7.4□□□□□ -1.22
LINC01090-201ENST00000415357 FXYD6Q9H0Q3 95 aa7.4□□□□□ -1.22
LINC01090-201ENST00000415357 SLA2Q9H6Q3 261 aa7.4□□□□□ -1.22
LINC01090-201ENST00000415357 COA4Q9NYJ1 87 aa7.4□□□□□ -1.22
LINC01090-201ENST00000415357 SCOCQ9UIL1 159 aa7.4□□□□□ -1.22
LINC01090-201ENST00000415357 HMX3A6NHT5 357 aa7.39□□□□□ -1.23
LINC01090-201ENST00000415357 OVOL1O14753 267 aa7.39□□□□□ -1.23
LINC01090-201ENST00000415357 MPPED1O15442 326 aa7.39□□□□□ -1.23
LINC01090-201ENST00000415357 PRH1P02810 166 aa7.39□□□□□ -1.23
LINC01090-201ENST00000415357 MYOD1P15172 320 aa7.39□□□□□ -1.23
LINC01090-201ENST00000415357 NAT1P18440 290 aa7.39□□□□□ -1.23
LINC01090-201ENST00000415357 HLA-DMAP28067 261 aa7.39□□□□□ -1.23
LINC01090-201ENST00000415357 CD40LGP29965 261 aa7.39□□□□□ -1.23
LINC01090-201ENST00000415357 RORCP51449 518 aa7.39□□□□□ -1.23
LINC01090-201ENST00000415357 DGCR2P98153 550 aa7.39□□□□□ -1.23
LINC01090-201ENST00000415357 DYRK1AQ13627 763 aa7.39□□□□□ -1.23
LINC01090-201ENST00000415357 DEFB121Q5J5C9 76 aa7.39□□□□□ -1.23
LINC01090-201ENST00000415357 MMD2Q8IY49 270 aa7.39□□□□□ -1.23
LINC01090-201ENST00000415357 SPAG16Q8N0X2 631 aa7.39□□□□□ -1.23
LINC01090-201ENST00000415357 OR5H2Q8NGV7 314 aa7.39□□□□□ -1.23
LINC01090-201ENST00000415357 OR51H1Q8NH63 302 aa7.39□□□□□ -1.23
LINC01090-201ENST00000415357 GPX8Q8TED1 209 aa7.39□□□□□ -1.23
LINC01090-201ENST00000415357 GIMAP1Q8WWP7 306 aa7.39□□□□□ -1.23
LINC01090-201ENST00000415357 ZNF2Q9BSG1 426 aaPredicted RBP7.39□□□□□ -1.23
LINC01090-201ENST00000415357 DNAH9Q9NYC9 4486 aa7.38□□□□□ -1.23
LINC01090-201ENST00000415357 C13orf42A0A1B0GVH6 325 aa7.38□□□□□ -1.23
LINC01090-201ENST00000415357 SMIM31A0A1B0GVY4 71 aa7.38□□□□□ -1.23
LINC01090-201ENST00000415357 A0A1B0GW64 132 aa7.38□□□□□ -1.23
LINC01090-201ENST00000415357 FAM25AB3EWG3 89 aa7.38□□□□□ -1.23
LINC01090-201ENST00000415357 FAM25CB3EWG5 89 aa7.38□□□□□ -1.23
LINC01090-201ENST00000415357 FAM25GB3EWG6 89 aa7.38□□□□□ -1.23
LINC01090-201ENST00000415357 TEX22C9J3V5 150 aa7.38□□□□□ -1.23
LINC01090-201ENST00000415357 E7EUB6 86 aa7.38□□□□□ -1.23
LINC01090-201ENST00000415357 H3BUA1 57 aa7.38□□□□□ -1.23
LINC01090-201ENST00000415357 ACTL6BO94805 426 aa7.38□□□□□ -1.23
LINC01090-201ENST00000415357 KBTBD11O94819 623 aa7.38□□□□□ -1.23
LINC01090-201ENST00000415357 OR2A4O95047 310 aa7.38□□□□□ -1.23
LINC01090-201ENST00000415357 S1PR2O95136 353 aa7.38□□□□□ -1.23
LINC01090-201ENST00000415357 TRBV12-3P01733 135 aa7.38□□□□□ -1.23
LINC01090-201ENST00000415357 HSPB1P04792 205 aaKnown RBP7.38□□□□□ -1.23
LINC01090-201ENST00000415357 OR9G9P0C7N8 305 aa7.38□□□□□ -1.23
LINC01090-201ENST00000415357 RPA2P15927 270 aa7.38□□□□□ -1.23
LINC01090-201ENST00000415357 HRH1P35367 487 aa7.38□□□□□ -1.23
LINC01090-201ENST00000415357 KIR2DS2P43631 304 aa7.38□□□□□ -1.23
LINC01090-201ENST00000415357 TAS2R46P59540 309 aa7.38□□□□□ -1.23
LINC01090-201ENST00000415357 RPL11P62913 178 aaKnown RBP7.38□□□□□ -1.23
LINC01090-201ENST00000415357 ZNF45Q02386 682 aa7.38□□□□□ -1.23
LINC01090-201ENST00000415357 SPCS2Q15005 226 aa7.38□□□□□ -1.23
LINC01090-201ENST00000415357 MSMO1Q15800 293 aa7.38□□□□□ -1.23
LINC01090-201ENST00000415357 AADACL3Q5VUY0 350 aa7.38□□□□□ -1.23
LINC01090-201ENST00000415357 GPR141Q7Z602 305 aa7.38□□□□□ -1.23
LINC01090-201ENST00000415357 LYSMD2Q8IV50 215 aa7.38□□□□□ -1.23
LINC01090-201ENST00000415357 PUSL1Q8N0Z8 303 aaKnown RBP7.38□□□□□ -1.23
LINC01090-201ENST00000415357 ADAD2Q8NCV1 583 aaKnown RBP7.38□□□□□ -1.23
LINC01090-201ENST00000415357 TMEM167AQ8TBQ9 72 aa7.38□□□□□ -1.23
LINC01090-201ENST00000415357 MOB3AQ96BX8 217 aa7.38□□□□□ -1.23
LINC01090-201ENST00000415357 OR2A7Q96R45 310 aa7.38□□□□□ -1.23
LINC01090-201ENST00000415357 TINAGL1Q9GZM7 467 aaPredicted RBP7.38□□□□□ -1.23
LINC01090-201ENST00000415357 FBXL7Q9UJT9 491 aa7.38□□□□□ -1.23
LINC01090-201ENST00000415357 COL7A1Q02388 2944 aa7.37□□□□□ -1.23
LINC01090-201ENST00000415357 CREBL2O60519 120 aaPredicted RBP7.37□□□□□ -1.23
LINC01090-201ENST00000415357 SAP30O75446 220 aa7.37□□□□□ -1.23
LINC01090-201ENST00000415357 RLN1P04808 185 aa7.37□□□□□ -1.23
LINC01090-201ENST00000415357 IL6RP08887 468 aaPredicted RBP7.37□□□□□ -1.23
LINC01090-201ENST00000415357 ZNF182P17025 639 aaPredicted RBP7.37□□□□□ -1.23
LINC01090-201ENST00000415357 GNRHRP30968 328 aa7.37□□□□□ -1.23
LINC01090-201ENST00000415357 RPL27AP46776 148 aaKnown RBP7.37□□□□□ -1.23
LINC01090-201ENST00000415357 CATR1Q13166 79 aa7.37□□□□□ -1.23
LINC01090-201ENST00000415357 OR4A47Q6IF82 309 aa7.37□□□□□ -1.23
LINC01090-201ENST00000415357 MZT2AQ6P582 158 aa7.37□□□□□ -1.23
LINC01090-201ENST00000415357 HAPLN4Q86UW8 402 aa7.37□□□□□ -1.23
LINC01090-201ENST00000415357 CLVS1Q8IUQ0 354 aaPredicted RBP7.37□□□□□ -1.23
LINC01090-201ENST00000415357 ZBTB34Q8NCN2 500 aa7.37□□□□□ -1.23
LINC01090-201ENST00000415357 VSTM2AQ8TAG5 236 aa7.37□□□□□ -1.23
LINC01090-201ENST00000415357 TMEM68Q96MH6 324 aa7.37□□□□□ -1.23
LINC01090-201ENST00000415357 CMTM3Q96MX0 182 aa7.37□□□□□ -1.23
LINC01090-201ENST00000415357 FYTTD1Q96QD9 318 aaKnown RBP7.37□□□□□ -1.23
LINC01090-201ENST00000415357 MIXL1Q9H2W2 232 aa7.37□□□□□ -1.23
LINC01090-201ENST00000415357 EXTL2Q9UBQ6 330 aa7.37□□□□□ -1.23
LINC01090-201ENST00000415357 TNCP24821 2201 aa7.37□□□□□ -1.23
LINC01090-201ENST00000415357 TRAV3A0A0B4J244 114 aa7.36□□□□□ -1.23
LINC01090-201ENST00000415357 A0A0G2JLM5 398 aa7.36□□□□□ -1.23
LINC01090-201ENST00000415357 CGB1A6NKQ9 187 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms