RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 BAXQ07812 192 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 JOSD1Q15040 202 aaPredicted RBP2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 OR8G1Q15617 311 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 MLF2Q15773 248 aaPredicted RBP2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 LRRC37A5PQ49AS3 106 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 HIGD2BQ4VC39 106 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 KHDC3LQ587J8 217 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 MESTQ5EB52 335 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 PYY3Q5JQD4 70 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 OR10J3Q5JRS4 329 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 TMEM215Q68D42 235 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 RPL7L1Q6DKI1 246 aaKnown RBP2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 Q6ZRG5 221 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 OLIG3Q7RTU3 272 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 VN1R4Q7Z5H5 301 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 SGPP2Q8IWX5 399 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 HIST3H2BBQ8N257 126 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 FAM24BQ8N5W8 94 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 SUMF2Q8NBJ7 301 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 OR4F17Q8NGA8 305 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 OR10G7Q8NGN6 311 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 OR5H2Q8NGV7 314 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 OR4F5Q8NH21 305 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 OR51F2Q8NH61 342 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 ZNF563Q8TA94 476 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 FNDC9Q8TBE3 224 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 FGF14Q92915 247 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 RERGQ96A58 199 aaPredicted RBP2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 FGGYQ96C11 551 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 CPNE2Q96FN4 548 aaPredicted RBP2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 OR10C1Q96KK4 312 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 BMFQ96LC9 184 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 OR2A5Q96R48 311 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 OR4F4Q96R69 305 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 IMMP2LQ96T52 175 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 P2RX4Q99571 388 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 NIPSNAP3BQ9BS92 247 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 ADAT1Q9BUB4 502 aaKnown RBP2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 TXNIPQ9H3M7 391 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 UBE2ZQ9H832 354 aaPredicted RBP2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 DOK5Q9P104 306 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 ZNF319Q9P2F9 582 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 SLC23A2Q9UGH3 650 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 VAX2Q9UIW0 290 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 OR52A1Q9UKL2 312 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 SLC7A11Q9UPY5 501 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 C14orf166Q9Y224 244 aaKnown RBP2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 FARSAQ9Y285 508 aaKnown RBP2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 V9GYS6 101 aa2.88□□□□□ -1.95
HMGB3P23-201ENST00000414981 IGKV1D-42A0A075B6H8 117 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 IGLV1-36A0A0B4J1U3 117 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 KIR2DS1A0A191URI9 304 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 TMEM235A6NFC5 223 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 RBFOX3A6NFN3 312 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 SMIM9A6NGZ8 99 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 CRYM-AS1A6NIL9 109 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 C4orf51C9J302 202 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 C9JQL5 133 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 K7EQD1 137 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 K7N7A8 449 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 HMGB3O15347 200 aaKnown RBP2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 ENSAO43768 121 aaKnown RBP2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 TRAPPC6AO75865 159 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 CDS2O95674 445 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 HIST1H1EP10412 219 aaKnown RBP2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 SCGB1A1P11684 91 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 ZNF708P17019 499 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 AKR1C4P17516 323 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 CCL1P22362 96 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 FKBP2P26885 142 aaKnown RBP2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 FCGR2CP31995 323 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 RPS10P46783 165 aaKnown RBP2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 PPOXP50336 477 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 EMDP50402 254 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 ZNF133P52736 654 aaPredicted RBP2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 CLDN6P56747 220 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 ERVK-16P61578 105 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 NUTF2P61970 127 aaKnown RBP2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 RPS23P62266 143 aaKnown RBP2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 RPS21P63220 83 aaKnown RBP2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 SUPT4H1P63272 117 aaKnown RBP2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 SLC35B1P78383 322 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 RPL18Q07020 188 aaKnown RBP2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 KIR2DS1Q14954 304 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 SLC10A1Q14973 349 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 ELOBQ15370 118 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 OR7A5Q15622 319 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 ZNF506Q5JVG8 444 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 AKR1C8PQ5T2L2 129 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 ATP1A1-AS1Q5TC04 95 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 SLC25A26Q70HW3 274 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 TMEM183AQ8IXX5 376 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 ZNF101Q8IZC7 436 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 ZNF283Q8N7M2 679 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 TPRX1Q8N7U7 411 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 OR52R1Q8NGF1 315 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 OR51A4Q8NGJ6 313 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 OR51A2Q8NGJ7 313 aa2.87□□□□□ -1.95
HMGB3P23-201ENST00000414981 OR8U1Q8NH10 309 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms