RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 HSD17B10Q99714 261 aaKnown RBP3.29□□□□□ -1.88
LINC01048-201ENST00000414480 NAA38Q9BRA0 125 aaKnown RBP3.29□□□□□ -1.88
LINC01048-201ENST00000414480 MRPL45Q9BRJ2 306 aaKnown RBP3.29□□□□□ -1.88
LINC01048-201ENST00000414480 DPY30Q9C005 99 aa3.29□□□□□ -1.88
LINC01048-201ENST00000414480 POLR2J3Q9H1A7 115 aaKnown RBP3.29□□□□□ -1.88
LINC01048-201ENST00000414480 RBKSQ9H477 322 aa3.29□□□□□ -1.88
LINC01048-201ENST00000414480 BANF2Q9H503 90 aa3.29□□□□□ -1.88
LINC01048-201ENST00000414480 C5orf66Q9H5L9 145 aa3.29□□□□□ -1.88
LINC01048-201ENST00000414480 ZNF331Q9NQX6 463 aaPredicted RBP3.29□□□□□ -1.88
LINC01048-201ENST00000414480 ZNF71Q9NQZ8 489 aaPredicted RBP3.29□□□□□ -1.88
LINC01048-201ENST00000414480 SERTAD4Q9NUC0 356 aa3.29□□□□□ -1.88
LINC01048-201ENST00000414480 TECRQ9NZ01 308 aaKnown RBP3.29□□□□□ -1.88
LINC01048-201ENST00000414480 DEC1Q9P2X7 70 aa3.29□□□□□ -1.88
LINC01048-201ENST00000414480 VAX2Q9UIW0 290 aa3.29□□□□□ -1.88
LINC01048-201ENST00000414480 CES1P1Q9UKY3 287 aa3.29□□□□□ -1.88
LINC01048-201ENST00000414480 NOP16Q9Y3C1 178 aaKnown RBP3.29□□□□□ -1.88
LINC01048-201ENST00000414480 PAM16Q9Y3D7 125 aa3.29□□□□□ -1.88
LINC01048-201ENST00000414480 SHANK1Q9Y566 2161 aa3.29□□□□□ -1.88
LINC01048-201ENST00000414480 CKAP5Q14008 2032 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 TRAV5A0A0B4J249 113 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 IGHV1-69-2A0A0G2JMI3 117 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 A0A1B0GW64 132 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 TMEM212A6NML5 194 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 ZNF732B4DXR9 585 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 FAM157AC9JC47 383 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 FNDC10F2Z333 226 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 F5H697 171 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 H3BQ15 152 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 H7BYZ3 331 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 SULT2B1O00204 365 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 PIRO00625 290 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 TNFRSF13BO14836 293 aaPredicted RBP3.28□□□□□ -1.88
LINC01048-201ENST00000414480 KBTBD11O94819 623 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 NDUFB4O95168 129 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 AIFM1O95831 613 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 CYB5AP00167 134 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 P01737 135 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 HLA-DQA2P01906 255 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 SLC35G6P0C7Q6 338 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 MYOD1P15172 320 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 HIST1H1DP16402 221 aaKnown RBP3.28□□□□□ -1.88
LINC01048-201ENST00000414480 CXCL3P19876 107 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 NFYBP25208 207 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 PSMB9P28065 219 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 TGFBR1P36897 503 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 UBE2NP61088 152 aaKnown RBP3.28□□□□□ -1.88
LINC01048-201ENST00000414480 PPP1CBP62140 327 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 ZNF92Q03936 586 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 PRDX4Q13162 271 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 CATR1Q13166 79 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 IHHQ14623 411 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 PAFAH1B3Q15102 231 aaKnown RBP3.28□□□□□ -1.88
LINC01048-201ENST00000414480 OR1C1Q15619 314 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 KRTAP15-1Q3LI76 137 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 TIGITQ495A1 244 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 C10orf91Q5T1B1 145 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 DCAF12Q5T6F0 453 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 EPGNQ6UW88 154 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 UNQ5815/PRO19632Q6UWF5 114 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 HRCT1Q6UXD1 115 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 STAC2Q6ZMT1 411 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 Q6ZN92 141 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 HSD11B1LQ7Z5J1 315 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 PTAR1Q7Z6K3 402 aaPredicted RBP3.28□□□□□ -1.88
LINC01048-201ENST00000414480 TMEM183AQ8IXX5 376 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 PRR22Q8IZ63 422 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 CMTM4Q8IZR5 234 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 PGBD5Q8N414 524 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 ANKRD29Q8N6D5 301 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 ZFP41Q8N8Y5 198 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 OR8B12Q8NGG6 310 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 OR1L1Q8NH94 360 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 DERL3Q96Q80 235 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 PEBP4Q96S96 227 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 VSIRQ9H7M9 311 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 EDA2RQ9HAV5 297 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 APOBEC3GQ9HC16 384 aaKnown RBP3.28□□□□□ -1.88
LINC01048-201ENST00000414480 SLC25A19Q9HC21 320 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 PRTFDC1Q9NRG1 225 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 SDR39U1Q9NRG7 319 aaPredicted RBP3.28□□□□□ -1.88
LINC01048-201ENST00000414480 DNAJC27Q9NZQ0 273 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 AK3Q9UIJ7 227 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 SCML2Q9UQR0 700 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 SIRT4Q9Y6E7 314 aaPredicted RBP3.28□□□□□ -1.88
LINC01048-201ENST00000414480 CSPG4Q6UVK1 2322 aa3.28□□□□□ -1.88
LINC01048-201ENST00000414480 ZNF469Q96JG9 3925 aaPredicted RBP3.27□□□□□ -1.89
LINC01048-201ENST00000414480 STAB1Q9NY15 2570 aa3.27□□□□□ -1.89
LINC01048-201ENST00000414480 PLXNA2O75051 1894 aa3.27□□□□□ -1.89
LINC01048-201ENST00000414480 LOC102725191A0A1B0GVB3 256 aa3.27□□□□□ -1.89
LINC01048-201ENST00000414480 A0A1W2PP18 115 aa3.27□□□□□ -1.89
LINC01048-201ENST00000414480 TCRBV5S2A0A599 114 aa3.27□□□□□ -1.89
LINC01048-201ENST00000414480 RBFOX3A6NFN3 312 aa3.27□□□□□ -1.89
LINC01048-201ENST00000414480 GGT3PA6NGU5 568 aa3.27□□□□□ -1.89
LINC01048-201ENST00000414480 M0R1B8 84 aa3.27□□□□□ -1.89
LINC01048-201ENST00000414480 ZNF593O00488 134 aaPredicted RBP3.27□□□□□ -1.89
LINC01048-201ENST00000414480 CXCL13O43927 109 aa3.27□□□□□ -1.89
LINC01048-201ENST00000414480 DPM2O94777 84 aa3.27□□□□□ -1.89
LINC01048-201ENST00000414480 TTRP02766 147 aa3.27□□□□□ -1.89
LINC01048-201ENST00000414480 GPX1P07203 203 aa3.27□□□□□ -1.89
LINC01048-201ENST00000414480 OR5AL1P0C617 328 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms