RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 HERV-K104P61576 105 aa20.19■□□□□ 0.82
VEGFA-207ENST00000413642 HAPLN4Q86UW8 402 aa20.19■□□□□ 0.82
VEGFA-207ENST00000413642 OR5H2Q8NGV7 314 aa20.19■□□□□ 0.82
VEGFA-207ENST00000413642 OR51H1Q8NH63 302 aa20.19■□□□□ 0.82
VEGFA-207ENST00000413642 GPX8Q8TED1 209 aa20.19■□□□□ 0.82
VEGFA-207ENST00000413642 SPIN2AQ99865 258 aa20.19■□□□□ 0.82
VEGFA-207ENST00000413642 SPIN2BQ9BPZ2 258 aa20.19■□□□□ 0.82
VEGFA-207ENST00000413642 ADAM30Q9UKF2 790 aa20.19■□□□□ 0.82
VEGFA-207ENST00000413642 HRASP01112 189 aa20.18■□□□□ 0.82
VEGFA-207ENST00000413642 RHOGP84095 191 aa20.18■□□□□ 0.82
VEGFA-207ENST00000413642 CD69Q07108 199 aa20.18■□□□□ 0.82
VEGFA-207ENST00000413642 ZNF343Q6P1L6 599 aa20.18■□□□□ 0.82
VEGFA-207ENST00000413642 TTC9CQ8N5M4 171 aa20.18■□□□□ 0.82
VEGFA-207ENST00000413642 VSTM2AQ8TAG5 236 aa20.18■□□□□ 0.82
VEGFA-207ENST00000413642 FYTTD1Q96QD9 318 aaKnown RBP20.18■□□□□ 0.82
VEGFA-207ENST00000413642 B9D2Q9BPU9 175 aa20.18■□□□□ 0.82
VEGFA-207ENST00000413642 AKIP1Q9NQ31 210 aa20.18■□□□□ 0.82
VEGFA-207ENST00000413642 SMIM31A0A1B0GVY4 71 aa20.17■□□□□ 0.82
VEGFA-207ENST00000413642 RPL27AP46776 148 aaKnown RBP20.17■□□□□ 0.82
VEGFA-207ENST00000413642 AADACL3Q5VUY0 350 aa20.17■□□□□ 0.82
VEGFA-207ENST00000413642 OR4A47Q6IF82 309 aa20.17■□□□□ 0.82
VEGFA-207ENST00000413642 MOB3AQ96BX8 217 aa20.17■□□□□ 0.82
VEGFA-207ENST00000413642 USMG5Q96IX5 58 aa20.17■□□□□ 0.82
VEGFA-207ENST00000413642 CMTM3Q96MX0 182 aa20.17■□□□□ 0.82
VEGFA-207ENST00000413642 PEF1Q9UBV8 284 aaKnown RBP20.17■□□□□ 0.82
VEGFA-207ENST00000413642 TRAV3A0A0B4J244 114 aa20.16■□□□□ 0.82
VEGFA-207ENST00000413642 SPNP16150 400 aa20.16■□□□□ 0.82
VEGFA-207ENST00000413642 HRH1P35367 487 aa20.16■□□□□ 0.82
VEGFA-207ENST00000413642 TAS2R46P59540 309 aa20.16■□□□□ 0.82
VEGFA-207ENST00000413642 CATR1Q13166 79 aa20.16■□□□□ 0.82
VEGFA-207ENST00000413642 FXYD6Q9H0Q3 95 aa20.16■□□□□ 0.82
VEGFA-207ENST00000413642 TRBV9A0A0B4J1U6 114 aa20.15■□□□□ 0.82
VEGFA-207ENST00000413642 RBFOX2O43251 390 aaKnown RBP eCLIP20.15■□□□□ 0.825e-9■□□□□ 10.6
VEGFA-207ENST00000413642 RPA2P15927 270 aa20.15■□□□□ 0.82
VEGFA-207ENST00000413642 ZP3P21754 424 aa20.15■□□□□ 0.82
VEGFA-207ENST00000413642 ALDH3B2P48448 385 aa20.15■□□□□ 0.82
VEGFA-207ENST00000413642 KLF5Q13887 457 aaPredicted RBP20.15■□□□□ 0.82
VEGFA-207ENST00000413642 RNASE12Q5GAN4 147 aaKnown RBP20.15■□□□□ 0.82
VEGFA-207ENST00000413642 OR4C12Q96R67 309 aa20.15■□□□□ 0.82
VEGFA-207ENST00000413642 MRPS26Q9BYN8 205 aaKnown RBP20.15■□□□□ 0.82
VEGFA-207ENST00000413642 TNCP24821 2201 aa20.14■□□□□ 0.81
VEGFA-207ENST00000413642 CGB1A6NKQ9 187 aa20.14■□□□□ 0.81
VEGFA-207ENST00000413642 FAM25AB3EWG3 89 aa20.14■□□□□ 0.81
VEGFA-207ENST00000413642 FAM25CB3EWG5 89 aa20.14■□□□□ 0.81
VEGFA-207ENST00000413642 FAM25GB3EWG6 89 aa20.14■□□□□ 0.81
VEGFA-207ENST00000413642 PGLYRP1O75594 196 aaPredicted RBP20.14■□□□□ 0.81
VEGFA-207ENST00000413642 OR2J3O76001 311 aa20.14■□□□□ 0.81
VEGFA-207ENST00000413642 S1PR2O95136 353 aa20.14■□□□□ 0.81
VEGFA-207ENST00000413642 ZNF735P0CB33 412 aa20.14■□□□□ 0.81
VEGFA-207ENST00000413642 AREGP15514 252 aa20.14■□□□□ 0.81
VEGFA-207ENST00000413642 RPL8P62917 257 aaKnown RBP20.14■□□□□ 0.81
VEGFA-207ENST00000413642 HRASLSQ9HDD0 168 aa20.14■□□□□ 0.81
VEGFA-207ENST00000413642 BET1LQ9NYM9 111 aa20.14■□□□□ 0.81
VEGFA-207ENST00000413642 HPRT1P00492 218 aa20.13■□□□□ 0.81
VEGFA-207ENST00000413642 RLN1P04808 185 aa20.13■□□□□ 0.81
VEGFA-207ENST00000413642 ZNF182P17025 639 aaPredicted RBP20.13■□□□□ 0.81
VEGFA-207ENST00000413642 HLA-GP17693 338 aa20.13■□□□□ 0.81
VEGFA-207ENST00000413642 MAS1LP35410 378 aa20.13■□□□□ 0.81
VEGFA-207ENST00000413642 SYNJ2BPP57105 145 aa20.13■□□□□ 0.81
VEGFA-207ENST00000413642 ATP5G2Q06055 141 aa20.13■□□□□ 0.81
VEGFA-207ENST00000413642 OR6F1Q8NGZ6 308 aa20.13■□□□□ 0.81
VEGFA-207ENST00000413642 RSRP1Q9BUV0 290 aa20.13■□□□□ 0.81
VEGFA-207ENST00000413642 SCPEP1Q9HB40 452 aa20.13■□□□□ 0.81
VEGFA-207ENST00000413642 FAM223BA6NKX1 122 aa20.12■□□□□ 0.81
VEGFA-207ENST00000413642 TAS2R31P59538 309 aa20.12■□□□□ 0.81
VEGFA-207ENST00000413642 DCTN2Q13561 401 aaKnown RBP20.12■□□□□ 0.81
VEGFA-207ENST00000413642 EXOSC2Q13868 293 aaKnown RBP20.12■□□□□ 0.81
VEGFA-207ENST00000413642 MZT2AQ6P582 158 aa20.12■□□□□ 0.81
VEGFA-207ENST00000413642 GPR141Q7Z602 305 aa20.12■□□□□ 0.81
VEGFA-207ENST00000413642 FAM223AQ8IWN6 122 aa20.12■□□□□ 0.81
VEGFA-207ENST00000413642 SLC2A9Q9NRM0 540 aa20.12■□□□□ 0.81
VEGFA-207ENST00000413642 UPK2O00526 184 aa20.11■□□□□ 0.81
VEGFA-207ENST00000413642 REG1AP05451 166 aa20.11■□□□□ 0.81
VEGFA-207ENST00000413642 NQO2P16083 231 aa20.11■□□□□ 0.81
VEGFA-207ENST00000413642 IL34Q6ZMJ4 242 aa20.11■□□□□ 0.81
VEGFA-207ENST00000413642 OR4A5Q8NH83 315 aa20.11■□□□□ 0.81
VEGFA-207ENST00000413642 ELOVL1Q9BW60 279 aa20.11■□□□□ 0.81
VEGFA-207ENST00000413642 ZNF257Q9Y2Q1 563 aa20.11■□□□□ 0.81
VEGFA-207ENST00000413642 DPPA5A6NC42 116 aa20.1■□□□□ 0.81
VEGFA-207ENST00000413642 NPIPB5A8MRT5 1133 aa20.1■□□□□ 0.81
VEGFA-207ENST00000413642 SPCS2Q15005 226 aa20.1■□□□□ 0.81
VEGFA-207ENST00000413642 POU2AF1Q16633 256 aa20.1■□□□□ 0.81
VEGFA-207ENST00000413642 SLC25A42Q86VD7 318 aa20.1■□□□□ 0.81
VEGFA-207ENST00000413642 NECAP1Q8NC96 275 aa20.1■□□□□ 0.81
VEGFA-207ENST00000413642 OR6Q1Q8NGQ2 317 aa20.1■□□□□ 0.81
VEGFA-207ENST00000413642 ASCL2Q99929 193 aa20.1■□□□□ 0.81
VEGFA-207ENST00000413642 PLEKHA2Q9HB19 425 aa20.1■□□□□ 0.81
VEGFA-207ENST00000413642 TMEM140Q9NV12 185 aa20.1■□□□□ 0.81
VEGFA-207ENST00000413642 S4R3C0 116 aa20.1■□□□□ 0.81
VEGFA-207ENST00000413642 DNAH9Q9NYC9 4486 aa20.09■□□□□ 0.81
VEGFA-207ENST00000413642 BMPR1BO00238 502 aa20.09■□□□□ 0.81
VEGFA-207ENST00000413642 NDUFB8O95169 186 aa20.09■□□□□ 0.81
VEGFA-207ENST00000413642 GP9P14770 177 aa20.09■□□□□ 0.81
VEGFA-207ENST00000413642 PSMB6P28072 239 aa20.09■□□□□ 0.81
VEGFA-207ENST00000413642 RCVRNP35243 200 aa20.09■□□□□ 0.81
VEGFA-207ENST00000413642 LPAR6P43657 344 aa20.09■□□□□ 0.81
VEGFA-207ENST00000413642 OR2B8PP59922 312 aa20.09■□□□□ 0.81
VEGFA-207ENST00000413642 TSPAN5P62079 268 aa20.09■□□□□ 0.81
VEGFA-207ENST00000413642 C15orf32Q32M92 178 aa20.09■□□□□ 0.81
VEGFA-207ENST00000413642 PHLDA2Q53GA4 152 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms