RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 ARL16Q0P5N6 197 aa7.28□□□□□ -1.24
PBRM1-209ENST00000412587 TMEM95Q3KNT9 176 aa7.28□□□□□ -1.24
PBRM1-209ENST00000412587 TMEM177Q53S58 311 aa7.28□□□□□ -1.24
PBRM1-209ENST00000412587 INO80CQ6PI98 192 aaPredicted RBP7.28□□□□□ -1.24
PBRM1-209ENST00000412587 OR4X2Q8NGF9 303 aa7.28□□□□□ -1.24
PBRM1-209ENST00000412587 TAF15Q92804 592 aaKnown RBP eCLIP7.28□□□□□ -1.24
PBRM1-209ENST00000412587 RAB1CQ92928 201 aa7.28□□□□□ -1.24
PBRM1-209ENST00000412587 CTHRC1Q96CG8 243 aa7.28□□□□□ -1.24
PBRM1-209ENST00000412587 WFDC6Q9BQY6 131 aa7.28□□□□□ -1.24
PBRM1-209ENST00000412587 ZNF236Q9UL36 1845 aa7.28□□□□□ -1.24
PBRM1-209ENST00000412587 MUC21A0A0G2JKD1 596 aa7.28□□□□□ -1.24
PBRM1-209ENST00000412587 MUC21A0A140T8X8 626 aa7.28□□□□□ -1.24
PBRM1-209ENST00000412587 GAGE12HA6NDE8 117 aa7.28□□□□□ -1.24
PBRM1-209ENST00000412587 ISG15P05161 165 aa7.28□□□□□ -1.24
PBRM1-209ENST00000412587 CD33P20138 364 aa7.28□□□□□ -1.24
PBRM1-209ENST00000412587 ZP4Q12836 540 aa7.28□□□□□ -1.24
PBRM1-209ENST00000412587 MUC21Q5SSG8 566 aa7.28□□□□□ -1.24
PBRM1-209ENST00000412587 TCF23Q7RTU1 214 aa7.28□□□□□ -1.24
PBRM1-209ENST00000412587 MOB3BQ86TA1 216 aa7.28□□□□□ -1.24
PBRM1-209ENST00000412587 LRRC75AQ8NAA5 344 aa7.28□□□□□ -1.24
PBRM1-209ENST00000412587 POM121L2Q96KW2 1035 aa7.28□□□□□ -1.24
PBRM1-209ENST00000412587 MS4A6AQ9H2W1 248 aa7.28□□□□□ -1.24
PBRM1-209ENST00000412587 TSSC4Q9Y5U2 329 aaPredicted RBP7.28□□□□□ -1.24
PBRM1-209ENST00000412587 PXMP4Q9Y6I8 212 aa7.28□□□□□ -1.24
PBRM1-209ENST00000412587 ZNF646O15015 1829 aaPredicted RBP7.28□□□□□ -1.24
PBRM1-209ENST00000412587 CACNA1HO95180 2353 aa7.28□□□□□ -1.24
PBRM1-209ENST00000412587 LOC107984156A0A0G2JMH3 177 aa7.28□□□□□ -1.24
PBRM1-209ENST00000412587 AGFG2O95081 481 aa7.28□□□□□ -1.24
PBRM1-209ENST00000412587 APOMO95445 188 aa7.28□□□□□ -1.24
PBRM1-209ENST00000412587 ASAH2BP0C7U1 165 aa7.28□□□□□ -1.24
PBRM1-209ENST00000412587 GAGE2BQ13066 116 aa7.28□□□□□ -1.24
PBRM1-209ENST00000412587 GAGE2EQ4V326 116 aa7.28□□□□□ -1.24
PBRM1-209ENST00000412587 KRTCAP3Q53RY4 240 aa7.28□□□□□ -1.24
PBRM1-209ENST00000412587 SAMD5Q5TGI4 173 aa7.28□□□□□ -1.24
PBRM1-209ENST00000412587 ARL17AQ8IVW1 177 aa7.28□□□□□ -1.24
PBRM1-209ENST00000412587 OR13C6PQ8NH95 151 aa7.28□□□□□ -1.24
PBRM1-209ENST00000412587 ZDHHC16Q969W1 377 aa7.28□□□□□ -1.24
PBRM1-209ENST00000412587 MRPL13Q9BYD1 178 aaKnown RBP7.28□□□□□ -1.24
PBRM1-209ENST00000412587 GNB4Q9HAV0 340 aa7.28□□□□□ -1.24
PBRM1-209ENST00000412587 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.28□□□□□ -1.24
PBRM1-209ENST00000412587 GAGE2DQ9UEU5 116 aa7.28□□□□□ -1.24
PBRM1-209ENST00000412587 ERRFI1Q9UJM3 462 aaPredicted RBP7.28□□□□□ -1.24
PBRM1-209ENST00000412587 RTTNQ86VV8 2226 aa7.28□□□□□ -1.24
PBRM1-209ENST00000412587 IGSF23A1L1A6 192 aa7.27□□□□□ -1.25
PBRM1-209ENST00000412587 AHRRA9YTQ3 701 aa7.27□□□□□ -1.25
PBRM1-209ENST00000412587 E9PQ18 207 aa7.27□□□□□ -1.25
PBRM1-209ENST00000412587 PPYP01298 95 aa7.27□□□□□ -1.25
PBRM1-209ENST00000412587 COX6A1P12074 109 aa7.27□□□□□ -1.25
PBRM1-209ENST00000412587 ACP1P24666 158 aa7.27□□□□□ -1.25
PBRM1-209ENST00000412587 APOBEC3AP31941 199 aaPredicted RBP7.27□□□□□ -1.25
PBRM1-209ENST00000412587 ZNF816Q0VGE8 651 aaPredicted RBP7.27□□□□□ -1.25
PBRM1-209ENST00000412587 PCOLCEQ15113 449 aa7.27□□□□□ -1.25
PBRM1-209ENST00000412587 C10orf35Q96D05 121 aa7.27□□□□□ -1.25
PBRM1-209ENST00000412587 SS18L2Q9UHA2 77 aa7.27□□□□□ -1.25
PBRM1-209ENST00000412587 OR2W1Q9Y3N9 320 aa7.27□□□□□ -1.25
PBRM1-209ENST00000412587 HILPDAQ9Y5L2 63 aa7.27□□□□□ -1.25
PBRM1-209ENST00000412587 LCTP09848 1927 aa7.27□□□□□ -1.25
PBRM1-209ENST00000412587 TRAV26-1A0A087WT03 109 aa7.27□□□□□ -1.25
PBRM1-209ENST00000412587 TRAV1-1A0A0B4J248 108 aa7.27□□□□□ -1.25
PBRM1-209ENST00000412587 hADV38S2A0JD32 116 aa7.27□□□□□ -1.25
PBRM1-209ENST00000412587 RBM11P57052 281 aaKnown RBP7.27□□□□□ -1.25
PBRM1-209ENST00000412587 TMPRSS3P57727 454 aa7.27□□□□□ -1.25
PBRM1-209ENST00000412587 RPL11P62913 178 aaKnown RBP7.27□□□□□ -1.25
PBRM1-209ENST00000412587 FOXL1Q12952 345 aa7.27□□□□□ -1.25
PBRM1-209ENST00000412587 TMEM187Q14656 261 aa7.27□□□□□ -1.25
PBRM1-209ENST00000412587 KCNMB1Q16558 191 aa7.27□□□□□ -1.25
PBRM1-209ENST00000412587 ABHD14AQ9BUJ0 271 aa7.27□□□□□ -1.25
PBRM1-209ENST00000412587 HIF1ANQ9NWT6 349 aa7.27□□□□□ -1.25
PBRM1-209ENST00000412587 ONECUT1Q9UBC0 465 aa7.27□□□□□ -1.25
PBRM1-209ENST00000412587 OTOFQ9HC10 1997 aa7.27□□□□□ -1.25
PBRM1-209ENST00000412587 PRSS1P07477 247 aa7.27□□□□□ -1.25
PBRM1-209ENST00000412587 PSMB2P49721 201 aa7.27□□□□□ -1.25
PBRM1-209ENST00000412587 IGLV3-21P80748 117 aaPredicted RBP7.27□□□□□ -1.25
PBRM1-209ENST00000412587 GAGE5Q13069 117 aa7.27□□□□□ -1.25
PBRM1-209ENST00000412587 GAGE6Q13070 117 aa7.27□□□□□ -1.25
PBRM1-209ENST00000412587 IBA57Q5T440 356 aaKnown RBP7.27□□□□□ -1.25
PBRM1-209ENST00000412587 ZNF841Q6ZN19 808 aa7.27□□□□□ -1.25
PBRM1-209ENST00000412587 TMEM105Q8N8V8 129 aa7.27□□□□□ -1.25
PBRM1-209ENST00000412587 PERPQ96FX8 193 aa7.27□□□□□ -1.25
PBRM1-209ENST00000412587 CLUHP3Q96NS8 147 aa7.27□□□□□ -1.25
PBRM1-209ENST00000412587 TMEM222Q9H0R3 208 aa7.27□□□□□ -1.25
PBRM1-209ENST00000412587 J3QRE1 110 aa7.27□□□□□ -1.25
PBRM1-209ENST00000412587 CT45A10P0DMU9 189 aa7.27□□□□□ -1.25
PBRM1-209ENST00000412587 RPS4XP62701 263 aaKnown RBP7.27□□□□□ -1.25
PBRM1-209ENST00000412587 FAM214BQ7L5A3 538 aa7.27□□□□□ -1.25
PBRM1-209ENST00000412587 BMPERQ8N8U9 685 aa7.27□□□□□ -1.25
PBRM1-209ENST00000412587 SLC7A10Q9NS82 523 aa7.27□□□□□ -1.25
PBRM1-209ENST00000412587 CDX4O14627 284 aaPredicted RBP7.26□□□□□ -1.25
PBRM1-209ENST00000412587 C3orf79P0CE67 100 aa7.26□□□□□ -1.25
PBRM1-209ENST00000412587 SPINK2P20155 84 aa7.26□□□□□ -1.25
PBRM1-209ENST00000412587 CXorf66Q5JRM2 361 aaPredicted RBP7.26□□□□□ -1.25
PBRM1-209ENST00000412587 PSMG4Q5JS54 123 aa7.26□□□□□ -1.25
PBRM1-209ENST00000412587 FHL5Q5TD97 284 aa7.26□□□□□ -1.25
PBRM1-209ENST00000412587 FAM27BQ5VT28 67 aa7.26□□□□□ -1.25
PBRM1-209ENST00000412587 CDCP2Q5VXM1 449 aa7.26□□□□□ -1.25
PBRM1-209ENST00000412587 MDP1Q86V88 176 aa7.26□□□□□ -1.25
PBRM1-209ENST00000412587 RTBDNQ9BSG5 229 aaPredicted RBP7.26□□□□□ -1.25
PBRM1-209ENST00000412587 TRAV38-1A0A0B4J264 116 aa7.26□□□□□ -1.25
PBRM1-209ENST00000412587 GPX1P07203 203 aa7.26□□□□□ -1.25
PBRM1-209ENST00000412587 VMA21Q3ZAQ7 101 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms