RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 HLA-DMAP28067 261 aa14.6□□□□□ -0.07
SF3A1-202ENST00000411423 INSL3P51460 131 aa14.6□□□□□ -0.07
SF3A1-202ENST00000411423 SNX29P2Q8IUI4 249 aa14.6□□□□□ -0.07
SF3A1-202ENST00000411423 TTC9CQ8N5M4 171 aa14.6□□□□□ -0.07
SF3A1-202ENST00000411423 OR51H1Q8NH63 302 aa14.6□□□□□ -0.07
SF3A1-202ENST00000411423 CMTM3Q96MX0 182 aa14.6□□□□□ -0.07
SF3A1-202ENST00000411423 B9D2Q9BPU9 175 aa14.6□□□□□ -0.07
SF3A1-202ENST00000411423 AKIP1Q9NQ31 210 aa14.6□□□□□ -0.07
SF3A1-202ENST00000411423 ZNF256Q9Y2P7 627 aaPredicted RBP14.6□□□□□ -0.07
SF3A1-202ENST00000411423 HUWE1Q7Z6Z7 4374 aaKnown RBP14.59□□□□□ -0.07
SF3A1-202ENST00000411423 A0A0G2JLM5 398 aa14.59□□□□□ -0.07
SF3A1-202ENST00000411423 MPPED1O15442 326 aa14.59□□□□□ -0.07
SF3A1-202ENST00000411423 HRH1P35367 487 aa14.59□□□□□ -0.07
SF3A1-202ENST00000411423 KIR2DS2P43631 304 aa14.59□□□□□ -0.07
SF3A1-202ENST00000411423 RORCP51449 518 aa14.59□□□□□ -0.07
SF3A1-202ENST00000411423 OR4A47Q6IF82 309 aa14.59□□□□□ -0.07
SF3A1-202ENST00000411423 IL34Q6ZMJ4 242 aa14.59□□□□□ -0.07
SF3A1-202ENST00000411423 ZNF429Q86V71 674 aa14.59□□□□□ -0.07
SF3A1-202ENST00000411423 OR5H2Q8NGV7 314 aa14.59□□□□□ -0.07
SF3A1-202ENST00000411423 MRPS26Q9BYN8 205 aaKnown RBP14.59□□□□□ -0.07
SF3A1-202ENST00000411423 RANGRFQ9HD47 186 aaPredicted RBP14.59□□□□□ -0.07
SF3A1-202ENST00000411423 ACTL6BO94805 426 aa14.58□□□□□ -0.08
SF3A1-202ENST00000411423 S1PR2O95136 353 aa14.58□□□□□ -0.08
SF3A1-202ENST00000411423 ZNF735P0CB33 412 aa14.58□□□□□ -0.08
SF3A1-202ENST00000411423 AREGP15514 252 aa14.58□□□□□ -0.08
SF3A1-202ENST00000411423 SPNP16150 400 aa14.58□□□□□ -0.08
SF3A1-202ENST00000411423 RPL27AP46776 148 aaKnown RBP14.58□□□□□ -0.08
SF3A1-202ENST00000411423 HERV-K104P61576 105 aa14.58□□□□□ -0.08
SF3A1-202ENST00000411423 RHOGP84095 191 aa14.58□□□□□ -0.08
SF3A1-202ENST00000411423 KLF5Q13887 457 aaPredicted RBP14.58□□□□□ -0.08
SF3A1-202ENST00000411423 VSTM2AQ8TAG5 236 aa14.58□□□□□ -0.08
SF3A1-202ENST00000411423 SPIN2AQ99865 258 aa14.58□□□□□ -0.08
SF3A1-202ENST00000411423 SPIN2BQ9BPZ2 258 aa14.58□□□□□ -0.08
SF3A1-202ENST00000411423 PEF1Q9UBV8 284 aaKnown RBP14.58□□□□□ -0.08
SF3A1-202ENST00000411423 ZMAT5Q9UDW3 170 aaKnown RBP14.58□□□□□ -0.08
SF3A1-202ENST00000411423 RBFOX2O43251 390 aaKnown RBP eCLIP14.57□□□□□ -0.08
SF3A1-202ENST00000411423 CREBL2O60519 120 aaPredicted RBP14.57□□□□□ -0.08
SF3A1-202ENST00000411423 PGLYRP1O75594 196 aaPredicted RBP14.57□□□□□ -0.08
SF3A1-202ENST00000411423 HRASP01112 189 aa14.57□□□□□ -0.08
SF3A1-202ENST00000411423 RLN1P04808 185 aa14.57□□□□□ -0.08
SF3A1-202ENST00000411423 RPA2P15927 270 aa14.57□□□□□ -0.08
SF3A1-202ENST00000411423 SPCS2Q15005 226 aa14.57□□□□□ -0.08
SF3A1-202ENST00000411423 POU2AF1Q16633 256 aa14.57□□□□□ -0.08
SF3A1-202ENST00000411423 RNASE12Q5GAN4 147 aaKnown RBP14.57□□□□□ -0.08
SF3A1-202ENST00000411423 AADACL3Q5VUY0 350 aa14.57□□□□□ -0.08
SF3A1-202ENST00000411423 USMG5Q96IX5 58 aa14.57□□□□□ -0.08
SF3A1-202ENST00000411423 FYTTD1Q96QD9 318 aaKnown RBP14.57□□□□□ -0.08
SF3A1-202ENST00000411423 BET1LQ9NYM9 111 aa14.57□□□□□ -0.08
SF3A1-202ENST00000411423 DMRT1Q9Y5R6 373 aa14.57□□□□□ -0.08
SF3A1-202ENST00000411423 OR2J3O76001 311 aa14.56□□□□□ -0.08
SF3A1-202ENST00000411423 LY86O95711 162 aa14.56□□□□□ -0.08
SF3A1-202ENST00000411423 HPRT1P00492 218 aa14.56□□□□□ -0.08
SF3A1-202ENST00000411423 SYNJ2BPP57105 145 aa14.56□□□□□ -0.08
SF3A1-202ENST00000411423 TAS2R46P59540 309 aa14.56□□□□□ -0.08
SF3A1-202ENST00000411423 CD69Q07108 199 aa14.56□□□□□ -0.08
SF3A1-202ENST00000411423 CATR1Q13166 79 aa14.56□□□□□ -0.08
SF3A1-202ENST00000411423 FANCD2OSQ96PS1 177 aa14.56□□□□□ -0.08
SF3A1-202ENST00000411423 MIXL1Q9H2W2 232 aa14.56□□□□□ -0.08
SF3A1-202ENST00000411423 BMPR1BO00238 502 aa14.55□□□□□ -0.08
SF3A1-202ENST00000411423 UPK2O00526 184 aa14.55□□□□□ -0.08
SF3A1-202ENST00000411423 REG1AP05451 166 aa14.55□□□□□ -0.08
SF3A1-202ENST00000411423 ZNF182P17025 639 aaPredicted RBP14.55□□□□□ -0.08
SF3A1-202ENST00000411423 HLA-GP17693 338 aa14.55□□□□□ -0.08
SF3A1-202ENST00000411423 ZP3P21754 424 aa14.55□□□□□ -0.08
SF3A1-202ENST00000411423 MAS1LP35410 378 aa14.55□□□□□ -0.08
SF3A1-202ENST00000411423 TAS2R31P59538 309 aa14.55□□□□□ -0.08
SF3A1-202ENST00000411423 RPL8P62917 257 aaKnown RBP14.55□□□□□ -0.08
SF3A1-202ENST00000411423 EXOSC2Q13868 293 aaKnown RBP14.55□□□□□ -0.08
SF3A1-202ENST00000411423 ZNF585BQ52M93 769 aa14.55□□□□□ -0.08
SF3A1-202ENST00000411423 SCPEP1Q9HB40 452 aa14.55□□□□□ -0.08
SF3A1-202ENST00000411423 SLC2A9Q9NRM0 540 aa14.55□□□□□ -0.08
SF3A1-202ENST00000411423 SMIM31A0A1B0GVY4 71 aa14.54□□□□□ -0.08
SF3A1-202ENST00000411423 FAM223BA6NKX1 122 aa14.54□□□□□ -0.08
SF3A1-202ENST00000411423 NPIPB5A8MRT5 1133 aa14.54□□□□□ -0.08
SF3A1-202ENST00000411423 FAM25AB3EWG3 89 aa14.54□□□□□ -0.08
SF3A1-202ENST00000411423 FAM25CB3EWG5 89 aa14.54□□□□□ -0.08
SF3A1-202ENST00000411423 FAM25GB3EWG6 89 aa14.54□□□□□ -0.08
SF3A1-202ENST00000411423 M0QYG6 137 aa14.54□□□□□ -0.08
SF3A1-202ENST00000411423 NDUFB8O95169 186 aa14.54□□□□□ -0.08
SF3A1-202ENST00000411423 CRYGCP07315 174 aa14.54□□□□□ -0.08
SF3A1-202ENST00000411423 GP9P14770 177 aa14.54□□□□□ -0.08
SF3A1-202ENST00000411423 CTRB1P17538 263 aa14.54□□□□□ -0.08
SF3A1-202ENST00000411423 OR2B8PP59922 312 aa14.54□□□□□ -0.08
SF3A1-202ENST00000411423 CTRB2Q6GPI1 263 aa14.54□□□□□ -0.08
SF3A1-202ENST00000411423 GPR141Q7Z602 305 aa14.54□□□□□ -0.08
SF3A1-202ENST00000411423 FAM223AQ8IWN6 122 aa14.54□□□□□ -0.08
SF3A1-202ENST00000411423 OR6F1Q8NGZ6 308 aa14.54□□□□□ -0.08
SF3A1-202ENST00000411423 OR4A5Q8NH83 315 aa14.54□□□□□ -0.08
SF3A1-202ENST00000411423 FCAMRQ8WWV6 532 aa14.54□□□□□ -0.08
SF3A1-202ENST00000411423 ABHD1Q96SE0 405 aa14.54□□□□□ -0.08
SF3A1-202ENST00000411423 PLEKHA2Q9HB19 425 aa14.54□□□□□ -0.08
SF3A1-202ENST00000411423 HRASLSQ9HDD0 168 aa14.54□□□□□ -0.08
SF3A1-202ENST00000411423 TMEM140Q9NV12 185 aa14.54□□□□□ -0.08
SF3A1-202ENST00000411423 KLK11Q9UBX7 282 aa14.54□□□□□ -0.08
SF3A1-202ENST00000411423 ZNF257Q9Y2Q1 563 aa14.54□□□□□ -0.08
SF3A1-202ENST00000411423 S4R3C0 116 aa14.54□□□□□ -0.08
SF3A1-202ENST00000411423 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.53□□□□□ -0.08
SF3A1-202ENST00000411423 IGLV1-51P01701 117 aa14.53□□□□□ -0.08
SF3A1-202ENST00000411423 IGHV3-23P01764 117 aa14.53□□□□□ -0.08
SF3A1-202ENST00000411423 NQO2P16083 231 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms