RNA–Protein interactions for RNA: ENST00000411243.1

RNU4-61P-201, Transcript of RNA, U4 small nuclear 61, pseudogene, humanhuman

BASIC

Gene RNU4-61P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-61P-201ENST00000411243 KDM5AP29375 1690 aaKnown RBP-1.72□□□□□ -2.68
RNU4-61P-201ENST00000411243 MYO5BQ9ULV0 1848 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 LRP6O75581 1613 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 NUP160Q12769 1436 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 ATP10AO60312 1499 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 TRAV8-3A0A0A6YYJ7 113 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 TRBV9A0A0B4J1U6 114 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 LINC00959A0A1B0GUT2 108 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 GOLGA8IPA6NC78 632 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 SYCE1LA8MT33 242 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 TMEM14DPA8MWL7 114 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 GOLGA8MH3BSY2 632 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 NDUFAB1O14561 156 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 SLC16A4O15374 487 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 FLOT1O75955 427 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 HPRT1P00492 218 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 MBP02144 154 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 RD3LP0DJH9 198 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 SCGB1C2P0DMR2 95 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 PORP16435 677 aaPredicted RBP-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 UGT2B7P16662 529 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 ZNF24P17028 368 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 SPI1P17947 270 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 RPS3P23396 243 aaKnown RBP eCLIP-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 MSNP26038 577 aaKnown RBP-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 SERPINB6P35237 376 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 DUSP3P51452 185 aaPredicted RBP-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 CLDN8P56748 225 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 SSTP61278 116 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 ACTG2P63267 376 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 MESTQ5EB52 335 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 OR10J3Q5JRS4 329 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 CFAP157Q5JU67 520 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 ACTL10Q5JWF8 245 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 SYT6Q5T7P8 510 aaPredicted RBP-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 REEP3Q6NUK4 255 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 CLEC19AQ6UXS0 136 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 CATSPER4Q7RTX7 472 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 BAP18Q8IXM2 172 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 SLC35F2Q8IXU6 374 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 NECAB1Q8N987 351 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 TMEM229BQ8NBD8 167 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 OR4F6Q8NGB9 312 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 OR4D5Q8NGN0 318 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 Q8TAT8 98 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 SCGB1C1Q8TD33 95 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 CXorf40AQ8TE69 158 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 THRSPQ92748 146 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 CPNE2Q96FN4 548 aaPredicted RBP-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 PLEKHA8Q96JA3 519 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 C7orf34Q96L11 122 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 CATSPER2Q96P56 530 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 RBP7Q96R05 134 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 CLCC1Q96S66 551 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 CHP1Q99653 195 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 UTP23Q9BRU9 249 aaKnown RBP-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 FTHL17Q9BXU8 183 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 NXF5Q9H1B4 397 aaKnown RBP-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 CCDC68Q9H2F9 335 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 FBXO44Q9H4M3 255 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 WDR55Q9H6Y2 383 aaPredicted RBP-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 XAGE1AQ9HD64 81 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 PRMT8Q9NR22 394 aaPredicted RBP-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 BATF3Q9NR55 127 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 MAT2BQ9NZL9 334 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 NAT8Q9UHE5 227 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 OR52A1Q9UKL2 312 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 EPDR1Q9UM22 224 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 TDRKHQ9Y2W6 561 aaKnown RBP-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 GOLT1BQ9Y3E0 138 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 POLR3HQ9Y535 204 aaPredicted RBP-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 TIMM22Q9Y584 194 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 KDM3BQ7LBC6 1761 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 KIF16BQ96L93 1317 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 DOCK5Q9H7D0 1870 aa-1.73□□□□□ -2.69
RNU4-61P-201ENST00000411243 RIC1Q4ADV7 1423 aa-1.74□□□□□ -2.69
RNU4-61P-201ENST00000411243 MYH10P35580 1976 aa-1.74□□□□□ -2.69
RNU4-61P-201ENST00000411243 A0A0U1RRA0 63 aa-1.74□□□□□ -2.69
RNU4-61P-201ENST00000411243 LINC00862A6NCI5 91 aa-1.74□□□□□ -2.69
RNU4-61P-201ENST00000411243 TRIM64CA6NLI5 447 aa-1.74□□□□□ -2.69
RNU4-61P-201ENST00000411243 HMGB1P1B2RPK0 211 aaPredicted RBP-1.74□□□□□ -2.69
RNU4-61P-201ENST00000411243 E7EUB6 86 aa-1.74□□□□□ -2.69
RNU4-61P-201ENST00000411243 SCAMP2O15127 329 aaKnown RBP-1.74□□□□□ -2.69
RNU4-61P-201ENST00000411243 CHADO15335 359 aa-1.74□□□□□ -2.69
RNU4-61P-201ENST00000411243 CLDN3O15551 220 aa-1.74□□□□□ -2.69
RNU4-61P-201ENST00000411243 TGOLN2O43493 480 aa-1.74□□□□□ -2.69
RNU4-61P-201ENST00000411243 XRCC2O43543 280 aa-1.74□□□□□ -2.69
RNU4-61P-201ENST00000411243 PROSCO94903 275 aa-1.74□□□□□ -2.69
RNU4-61P-201ENST00000411243 CNIH1O95406 144 aa-1.74□□□□□ -2.69
RNU4-61P-201ENST00000411243 IFNGP01579 166 aa-1.74□□□□□ -2.69
RNU4-61P-201ENST00000411243 CXCL10P02778 98 aa-1.74□□□□□ -2.69
RNU4-61P-201ENST00000411243 SERPINE2P07093 398 aa-1.74□□□□□ -2.69
RNU4-61P-201ENST00000411243 RAB4AP20338 218 aa-1.74□□□□□ -2.69
RNU4-61P-201ENST00000411243 CDK2P24941 298 aa-1.74□□□□□ -2.69
RNU4-61P-201ENST00000411243 S100A2P29034 98 aa-1.74□□□□□ -2.69
RNU4-61P-201ENST00000411243 HSPA9P38646 679 aaKnown RBP-1.74□□□□□ -2.69
RNU4-61P-201ENST00000411243 CCT3P49368 545 aaKnown RBP-1.74□□□□□ -2.69
RNU4-61P-201ENST00000411243 RGS4P49798 205 aa-1.74□□□□□ -2.69
RNU4-61P-201ENST00000411243 PLA2G16P53816 162 aa-1.74□□□□□ -2.69
RNU4-61P-201ENST00000411243 LINC00313P59037 77 aa-1.74□□□□□ -2.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms