RNA–Protein interactions for RNA: ENST00000411034.1

SNORA40.8-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.8-201ENST00000411034 FAM45BPQ6NSW5 357 aa-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 SPATA8Q6RVD6 105 aa-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 SBSNQ6UWP8 590 aa-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 RASSF6Q6ZTQ3 369 aa-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 SSX8Q7RTT4 187 aa-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 SPATA24Q86W54 205 aa-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 DHFR2Q86XF0 187 aa-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 TMEM86AQ8N2M4 240 aa-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 C17orf78Q8N4C9 275 aa-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 SLC22A24Q8N4F4 322 aa-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 Q8N6K4 173 aa-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 C12orf29Q8N999 325 aa-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 SPERTQ8NA61 448 aa-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 OR5B17Q8NGF7 314 aa-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 OR8B3Q8NGG8 313 aa-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 OR52E4Q8NGH9 312 aa-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 STOML3Q8TAV4 291 aa-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 SLC37A2Q8TED4 501 aa-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 CCDC12Q8WUD4 166 aaPredicted RBP-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 ASB13Q8WXK3 278 aa-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 ACOT12Q8WYK0 555 aa-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 CCDC124Q96CT7 223 aaKnown RBP-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 GNPNAT1Q96EK6 184 aaPredicted RBP-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 SMIM12Q96EX1 92 aa-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 MSANTD3Q96H12 275 aa-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 CYTH2Q99418 400 aa-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 CCL13Q99616 98 aa-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 MRPL57Q9BQC6 102 aaKnown RBP-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 MED10Q9BTT4 135 aa-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 TMEM109Q9BVC6 243 aa-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 BBS2Q9BXC9 721 aa-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 MROQ9BYG7 248 aa-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 OR8D2Q9GZM6 311 aa-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 NSRP1Q9H0G5 558 aaKnown RBP-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 METTL9Q9H1A3 318 aa-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 TRABDQ9H4I3 376 aa-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 C10orf95Q9H7T3 257 aa-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 AGPAT3Q9NRZ7 376 aa-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 ZNHIT6Q9NWK9 470 aaKnown RBP-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 C1orf109Q9NX04 203 aa-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 EURLQ9NYK6 297 aa-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 CD300AQ9UGN4 299 aa-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 BAIAP2Q9UQB8 552 aa-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 TP53TG1Q9Y2A0 90 aa-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 ZFP30Q9Y2G7 519 aa-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 COQ4Q9Y3A0 265 aa-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 SBDSQ9Y3A5 250 aaKnown RBP eCLIP-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 SNURFQ9Y675 71 aa-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 SIPA1L1O43166 1804 aa-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 LAMA4Q16363 1823 aa-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 NAV3Q8IVL0 2385 aa-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 STRCQ7RTU9 1775 aa-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 CNTRLQ7Z7A1 2325 aa-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 COL4A5P29400 1685 aa-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 EIF4G1Q04637 1599 aaKnown RBP-0.02□□□□□ -2.41
SNORA40.8-201ENST00000411034 PTPRSQ13332 1948 aa-0.03□□□□□ -2.41
SNORA40.8-201ENST00000411034 DICER1Q9UPY3 1922 aaKnown RBP-0.03□□□□□ -2.41
SNORA40.8-201ENST00000411034 CACNA1EQ15878 2313 aa-0.03□□□□□ -2.41
SNORA40.8-201ENST00000411034 A0A1W2PP64 1363 aa-0.03□□□□□ -2.41
SNORA40.8-201ENST00000411034 LRPPRCP42704 1394 aaKnown RBP-0.03□□□□□ -2.41
SNORA40.8-201ENST00000411034 TNRC6BQ9UPQ9 1833 aaKnown RBP-0.03□□□□□ -2.41
SNORA40.8-201ENST00000411034 FRAS1Q86XX4 4008 aa-0.03□□□□□ -2.41
SNORA40.8-201ENST00000411034 MAP3K19Q56UN5 1328 aa-0.03□□□□□ -2.41
SNORA40.8-201ENST00000411034 SYNRGQ9UMZ2 1314 aa-0.03□□□□□ -2.41
SNORA40.8-201ENST00000411034 IGKV1D-42A0A075B6H8 117 aa-0.03□□□□□ -2.41
SNORA40.8-201ENST00000411034 TRAV14DV4A0A0A6YYC5 116 aa-0.03□□□□□ -2.41
SNORA40.8-201ENST00000411034 TEX50A0A1B0GTY4 177 aa-0.03□□□□□ -2.41
SNORA40.8-201ENST00000411034 TINCRA0A1B0GVN0 87 aa-0.03□□□□□ -2.41
SNORA40.8-201ENST00000411034 A0A1B0GW54 56 aa-0.03□□□□□ -2.41
SNORA40.8-201ENST00000411034 C5orf49A4QMS7 147 aa-0.03□□□□□ -2.41
SNORA40.8-201ENST00000411034 GGT3PA6NGU5 568 aa-0.03□□□□□ -2.41
SNORA40.8-201ENST00000411034 TMEM212A6NML5 194 aa-0.03□□□□□ -2.41
SNORA40.8-201ENST00000411034 FTCDNL1E5RQL4 147 aa-0.03□□□□□ -2.41
SNORA40.8-201ENST00000411034 MKRN2OSH3BPM6 223 aa-0.03□□□□□ -2.41
SNORA40.8-201ENST00000411034 SMLR1H3BR10 107 aa-0.03□□□□□ -2.41
SNORA40.8-201ENST00000411034 M0R2N4 97 aa-0.03□□□□□ -2.41
SNORA40.8-201ENST00000411034 CCRL2O00421 344 aa-0.03□□□□□ -2.41
SNORA40.8-201ENST00000411034 LST1O00453 97 aa-0.03□□□□□ -2.41
SNORA40.8-201ENST00000411034 ITGB1BP1O14713 200 aa-0.03□□□□□ -2.41
SNORA40.8-201ENST00000411034 TOX3O15405 576 aaPredicted RBP-0.03□□□□□ -2.41
SNORA40.8-201ENST00000411034 COCHO43405 550 aa-0.03□□□□□ -2.41
SNORA40.8-201ENST00000411034 OR2T1O43869 369 aa-0.03□□□□□ -2.41
SNORA40.8-201ENST00000411034 ATP6V1G2O95670 118 aa-0.03□□□□□ -2.41
SNORA40.8-201ENST00000411034 IGHV3-7P01780 117 aa-0.03□□□□□ -2.41
SNORA40.8-201ENST00000411034 HLA-DRAP01903 254 aa-0.03□□□□□ -2.41
SNORA40.8-201ENST00000411034 APOA1P02647 267 aa-0.03□□□□□ -2.41
SNORA40.8-201ENST00000411034 PMP2P02689 132 aa-0.03□□□□□ -2.41
SNORA40.8-201ENST00000411034 ORM1P02763 201 aa-0.03□□□□□ -2.41
SNORA40.8-201ENST00000411034 SHBGP04278 402 aa-0.03□□□□□ -2.41
SNORA40.8-201ENST00000411034 KRT7P08729 469 aa-0.03□□□□□ -2.41
SNORA40.8-201ENST00000411034 SULT1A3P0DMM9 295 aa-0.03□□□□□ -2.41
SNORA40.8-201ENST00000411034 SULT1A4P0DMN0 295 aa-0.03□□□□□ -2.41
SNORA40.8-201ENST00000411034 CCL1P22362 96 aa-0.03□□□□□ -2.41
SNORA40.8-201ENST00000411034 MSNP26038 577 aaKnown RBP-0.03□□□□□ -2.41
SNORA40.8-201ENST00000411034 HLA-DMBP28068 263 aa-0.03□□□□□ -2.41
SNORA40.8-201ENST00000411034 CD40LGP29965 261 aa-0.03□□□□□ -2.41
SNORA40.8-201ENST00000411034 ZNF93P35789 620 aaPredicted RBP-0.03□□□□□ -2.41
SNORA40.8-201ENST00000411034 FXYD2P54710 66 aa-0.03□□□□□ -2.41
SNORA40.8-201ENST00000411034 CXCR4P61073 352 aa-0.03□□□□□ -2.41
SNORA40.8-201ENST00000411034 CNBPP62633 177 aaKnown RBP-0.03□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms